Pongo pygmaeus (Bornean orangutan): 129021187
Help
Entry
129021187 CDS
T10128
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X2
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129021187 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129021187
NCBI-ProteinID:
XP_054322299
LinkDB
All DBs
Position
20:53066283..53092218
Genome browser
AA seq
590 aa
AA seq
DB search
MAAPYPGSGGGSEVKCVGGRGASVPWDFLPGLMVKAPSGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLA
PGRRGPAALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVEMTGS
SVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASLTKVPPSS
LVQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRAHALGLVALGHTLPPAPLAELPL
HGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHVDLLDK
GQVMTGYYRWLRRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAEGGQTPLDAFQL
PASMACEEASSPGPEPTEPEPPTEGKQAAPAENEAPQTQGKRIKVEPGPRETKGSEDSGD
EDPSGHSATPRPEFTSVIRAGVLKQDPVRPWGLAPPGDPPPTLLHAGFLPPVVRGLCTPG
AIRYGPAELGLVYPHLQRLGPGPALPEAFYPPLGLPYPGPAGTRLPRKGD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctatcccggcagtggcggcggaagcgaggtcaaatgcgtgggaggccgc
ggcgccagcgtcccctgggactttctacccgggctgatggtcaaggcgccgtccggaccg
tgcctgcaggcgcagcgcaaggagaagtcccggaacgcggcgcgctcgcggcgcgggaag
gagaacctggagttcttcgagctggccaagcttctcccgctgcccggcgccatctccagc
cagctggacaaggcttccatcgtgcgcctcagcgtcacctacctccgcctgcgccgtttc
gccgcgctgggggcgccgccctgggggctgagagccgcggggccgccagctggcctcgcc
ccaggccgccgcggcccggcagcgctggtctccgaagtcttcgagcagcacctgggaggt
cacatcttgcagtccctggatggctttgtgttcgccttgaaccaggaaggaaaattcctc
tacatctcagagacagtctccatctatctgggtctctcacaggtggagatgacgggcagc
agcgtcttcgactacattcaccctggggaccactcagaggtgctggagcaactggggctg
cggaccccgacccccggccccccaaccccgccctccgtctcctcttcctcctcctcttcc
tcttcgcttgcagatacccccgagatcgaggccagcctcaccaaggtgcccccctcctcc
ctggtccaggagcgctccttctttgtccgcatgaaatccacgctcaccaagagggggctg
cacgtcaaggcctcggggtacaaggtcatccacgtgactgggcgccttcgggcccacgcc
ctgggccttgtggccctcgggcacacgttgcccccggcccccctggctgagctgccactc
cacggacacatgatcgtcttccgtctcagcctgggtctcaccatccttgcttgtgagagc
agagtcagcgaccacatggacctggggccctcagagctggtgggccgcagctgctaccag
ttcgtccacggacaggacgccaccaggatccgccagagtcatgtggacttgctggacaag
ggtcaggtgatgactggttactaccgttggctgcggcgtgccgggggcttcgtgtggctg
cagtctgtggccacggtggctgggagcgggaagagccccggggagcaccatgtgctttgg
gtcagccacgtgctcagccaagccgagggtggtcaaactcctttggatgccttccagctt
ccagccagcatggcctgtgaggaggcatccagcccggggccagagcccacagagccggag
cctccgacggaagggaagcaggctgccccggcggagaacgaggccccccagacccagggc
aaacgcatcaaagtggagcccggcccgagggaaaccaaaggctccgaggacagtggcgac
gaggatccctctggccactcggccacaccgcggcccgagttcacctctgtcatccgggca
ggggtcctgaagcaggacccggtgcggccatggggcctggcgcctcccggggaccccccg
cccaccctcctgcacgcgggcttcctgccgccggtggtgcggggcctgtgcacgcccggt
gccatccgctacggccccgcggagctgggtctggtgtacccgcacctgcagaggctgggt
ccaggccccgcgctcccggaggccttttacccgcccctgggcctgccctacccggggccc
gcgggcaccaggctgccgcggaagggggactga
DBGET
integrated database retrieval system
