Pongo pygmaeus (Bornean orangutan): 129021364
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Entry
129021364 CDS
T10128
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X2
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04140
Autophagy - animal
ppyg04148
Efferocytosis
ppyg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129021364 (VPS16)
04148 Efferocytosis
129021364 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129021364 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyg04131
]
129021364 (VPS16)
Membrane trafficking [BR:
ppyg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129021364 (VPS16)
Hops complex
129021364 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
129021364
NCBI-ProteinID:
XP_054322607
LinkDB
All DBs
Position
21:complement(30803603..30829388)
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AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TALCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFTCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVH
MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGSHNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccactcggggactctgccttttaccggaaatat
gagctgtacagcatggactgggacctgaaggaggaactcagggattgcctggtggctgct
gcaccctatgggggccccattgcactgctgaggaacccctggcggaaggagaaagctgcc
agtgtgaggccagtgcttgatatatactctgcttccggcatgcctctggccagcctgctg
tggaagagtggacccgtggtgtccctgggctggtcagctgaggaggagctgctctgtgtg
caggaagatggtgctgtactggtttatgggcttcatggtgacttccggagacacttcagc
atgggcaatgaagtgctccagaaccgggttctggatgcccggatctttcacactgagttt
ggttccggagtggccatcctcacaggggcccaccgcttcaccctcagtgccaatgtgggt
gacctcaaactccgccggatgccagaggtgccaggtctgcaaagtgcaccctcctgctgg
actgcgctgtgccaggaccgagtggcacacattcttctggctgtggggcccgacctttac
ctcttggaccatgcagcctgctccgcagtgacaccccctggcctggccccaggagtaagc
agcttcctacagatggctgtctcctttacctaccgacacctggcactcttcacagacaca
ggctacatctggatggggacagcatcactcaaggagaagctatgtgagttcacctgcaac
atccgggcacctccaaagcagatggtctggtgcagccgtcctcgtagcaaggagagggcc
gtggtggtggcctgggaaaggcggctgatggtggtgggcgatgcacccgagagcatccag
tttgtgctggatgaggactcctacctggtgcctgagctcgatggggtccgcatcttctcc
cgcagcacccacgagttcctgcatgaggttccagcggccagcgaggagatcttcaaaatt
gcctcaatggcccccggggcgctgctcctggaggctcagaaggagtatgagaaagagagc
cagaaggcggatgagtacctgcgggagatccaggagctgggccagctgacccaggccgtg
cagcagtgcattgaggctgcaggacatgagcaccagccagacatgcagaagagtctgctc
agggccgcctccttcggaaagtgtttcctggacagatttccacccgacagcttcgtgcac
atgtgtcaggacctgcgtgtgctcaatgctgttcgggactatcacatcgggatcccactc
acctatagccaatacaagcagctcaccatccaggtgctgctggacaggcttgtgttgcgg
agactttaccccctggccatccagatatgcgagtacttgcgccttcctgaagtacagggc
gtcagcaggatcctggcccactgggcctgctacaaggtgcaacagaaggatgtctcagat
gaggatgtggctcgagccattaaccagaagctgggggacacgcctggtgtctcttactcc
gacattgctgcacgagcctatggttgtggccgcacggagctggccatcaagctgctggag
tatgagccacgctcaggggagcaggtaccccttcttctaaagatgaagaggagcaaactg
gcactaagcaaggccatcgagagcggggacactgacctggtgttcacggtgttgctgcac
ctgaagaacgagctgaaccgaggagattttttcatgacccttcggaatcagcccatggcc
ctgagtttgtaccgacagttctgtaagcatcaggagctagagacgctgaaggacctttac
aatcaggatgacaatcaccaggaattgggcagcttccacatccgagccagttatgctgca
gaagagcgtattgaggggcgagtagcagctctgcagacagccgccgatgccttctacaag
gccaagaatgagtttgcagccaaggctacagaggatcaaatgcggctcctacggctgcag
cggcgcctagaagacgagctggggggccagttcctagacctgtctctacatgacacagtt
accaccctcattcttggcagtcacaacaagcgtgcagagcagctggcacgtgacttccgc
atccctgacaagaggctctggtggctgaagctgactgccctggcagatttggaagactgg
gaagagctagagaagttttccaagagcaagaaatcacccattggctacctgccttttgtg
gagatctgcatgaaacaacacaacaaatatgaagccaagaagtatgcttcccgcgtgggt
cccgagcagaaggtcaaggctttgcttcttgttggcgatgtggctcaggctgcagatgtg
gccatcgaacaccggaatgaggctgagctgagcctcgtattgtcccactgcacgggagcc
acagatggggccacagctgacaagattcaacgggccagggcacaagcccagaagaagtga
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