Pongo pygmaeus (Bornean orangutan): 129021426
Help
Entry
129021426 CDS
T10128
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6 isoform X1
KO
K12855
pre-mRNA-processing factor 6
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129021426 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyg03041
]
129021426 (PRPF6)
Spliceosome [BR:
ppyg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129021426 (PRPF6)
Complex C
U5 SnRNP specific factors
129021426 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
TPR_1
TPR_CcmH_CycH
ARM_TT21_C
T7SS_EccA1_N
ChAPs
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
129021426
NCBI-ProteinID:
XP_054322763
LinkDB
All DBs
Position
21:66723925..66774672
Genome browser
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
QKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaaaccgttcctggggatgcccgcgccgctcggctacgtgccgggg
ctgggccggggcgccactggcttcaccacgcggtcagacattgggcccgcccgtgatgca
aatgatcctgtggatgatcgccatgcacccccaggcaagagaaccgttggggaccagatg
aagaaaaaccaggctgctgatgatgacgacgaggatctaaatgacaccaattatgatgag
tttaatggctatgctgggagcctcttctcaagtggaccctatgagaaagatgatgaggaa
gcagatgctatttatgcagctctggataaaaggatggatgaaagaagaaaagagagacgg
gagcaaagggagaaagaagaaatagagaaatatcgtatggaacgccccaaaatccaacag
cagttctcagacctcaagaggaagttggcagaagtcacagaagaagagtggctgagcatc
cctgaggttggcgatgccagaaacaaacgtcagcggaacccacgctatgagaagctgacc
cctgttcctgacagtttctttgccaaacatttacagaccggagagaaccatacctcagtg
gatcctcgacaaactcaatttggaggtcttaatacaccatatccaggtggactaaacact
ccatacccaggtggaatgacaccaggattgatgacacctggcacaggtgagctggacatg
aggaagattggccaagcgaggaacactctgatggacatgaggctgagccaggtgtctgac
tccgtgagtggacagaccgtcgttgaccccaaaggctacctgacagatttaaattccatg
atcccgacacatggaggagacatcaatgatatcaagaaggcacggctgctccttaagtct
gttcgggaaacgaaccctcatcacccgccagcctggattgcgtcagcccgcctggaagaa
gtcactgggaagctacaagtagctcggaaccttatcatgaaggggacagagatgtgcccc
aagagtgaagatgtctggctggaagcagccaggttgcagcctggggacacagccaaggcc
gtggtagcccaagctgtccgtcatcttccacagtctgtcaggatttacatcagagcagca
gagctggaaacggacattcgtgcaaagaagcgggttcttcggaaagccctcgagcatgtt
ccaaactcggttcgcttgtggaaagcagccgttgagctggaagagcctgaagatgctaga
atcatgctgagccgagctgtggagtgctgccccaccagtgtggagctctggcttgctctg
gcaaggctggagacctatgaaaatgcccggaaggtcttgaacaaggcacgggagaacatt
cctacagaccgacatatctggatcacggctgctaagctggaggaagccaacgggaacacg
cagatggtggagaagatcattgaccgagccatcacctcgctgcgggccaacggtgtggag
atcaaccgcgagcagtggatccaggatgccgaggaatgtgacagggctgggagtgtggcc
acgtgccaggccgtcatgcgtgccgtgattgggattgggattgaggaggaagatcggaag
catacctggatggaggatgctgacagttgtgtagcccacaatgccctggagtgtgcacga
gccatctacgcctacgccctgcaggtgttccccagcaagaagagtgtgtggctgcgcgcc
gcgtacttcgagaagaaccatggcactcgggagtccctggaagcactcctgcagagggct
gtggcccactgccccaaagcggaggtgctgtggctcatgggcgccaagtccaagtggctg
gcaggggatgtgcccgcagcaaggagcatcctggccctggccttccaggccaaccccaac
agtgaggagatctggctggcagccgtgaagctggagtccgagaatgatgagtacgagcgg
gcccggaggctgctggccaaggcgcggagcagtgcccccaccgcccgggtgttcatgaag
tctgtgaagctggagtgggtgcaagacaacatcagggcagcccaggatctgtgcgaggag
gccctgcggcactatgaggacttccctaagctgtggatgatgaaggggcagattgaggag
cagaaggagatgatggagaaggcgcgggaagcctataaccaggggttgaagaagtgtccc
cactccacacccctgtggcttttgctctctcggctggaggagaagattgggcagcttact
cgagcacgggccattttggaaaagtctcgtctgaagaacccaaagaaccctgggctgtgg
ttggagtccgtgcggctggagtaccgtgcagggctgaagaacatcgcaaatacactcatg
gccaaggcgctgcaggagtgccctaactctggtatcctgtggtctgaggccatcttcctc
gaggcgaggccccagaggaggaccaagagcgtggatgccctgaagaagtgtgagcatgac
ccgcatgtgctcctggccgtggccaagctgttttggagtcagcggaagatcaccaaggcc
agggagtggttccaccgcactgtgaagattgactcggacctgggggatgcctgggccttc
ttctataagtttgagctgcagcatggcactgaggagcagcaggaggaggtgaggaagcga
tgtgagagtgcagagcctcggcatggggagctgtggtgtgccgtgtccaaggacatcgcc
aactggcagaagaagatcggggacatccttaggctggtggccggccgcatcaagaacacc
ttctga
DBGET
integrated database retrieval system
