Pongo pygmaeus (Bornean orangutan): 129021447
Help
Entry
129021447 CDS
T10128
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129021447 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppyg04515
]
129021447 (NFASC)
Cell adhesion molecules [BR:
ppyg04515
]
Immunoglobulin superfamily
L1 family
129021447 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
129021447
NCBI-ProteinID:
XP_054322815
LinkDB
All DBs
Position
1:complement(44434615..44626693)
Genome browser
AA seq
1448 aa
AA seq
DB search
MRRLAARGAAGDAGEVAAPAAHSSDSAQGRSPSPWRLIDLCAIWDSGVYLPSAAWNGASS
GVARRRLNEAEKLSSVREAQLKRLEVTRPRVLGSREQGRVPRMARKPPPPWVHAAFLLCL
LSLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN
SRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSK
SPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLY
FSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMV
LRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLA
SNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGEPLQ
SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQ
LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGI
YTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWL
KDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTN
RLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDH
SKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEG
TRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYE
IRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQL
REYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGP
RSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVG
KQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAPPT
LPPTTVGATGAVSSIDATAIAATTEATTVPIIPTVAPTTIATTTVATTTTTTAATTTTTE
SPPTTTSGTKIHESAPDEQSIWNVTVLPNSKWANITWKHNFGPGTDFVVEYIDSNHTKKT
VPVKAQAQPIQLTDLYPGMTYTLRVYSRDNEGISSTVITFMTSTAYTNNQADIATQGWFI
GLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQ
GSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSP
VNAIYSLA
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctggcggcgagaggcgctgcaggggacgcgggggaagtggcggcgccggca
gcgcacagctcggacagcgcccagggccggagcccgagcccttggaggttgattgactta
tgtgcaatttgggactctggagtttaccttccctccgcagcctggaacggagcctcctct
ggtgttgcaaggaggaggctgaatgaggcagagaagctgagctctgtccgggaagcccag
ttaaagcggctcgaggtgacaagaccccgagtgctggggagcagggagcagggccgggtg
ccgaggatggccaggaagccaccaccgccctgggtccatgcagccttcctcctctgcctc
ctcagtcttggcggagccatcgaaattcctatggatccaagcattcagaatgagctgacg
cagccaccaaccatcaccaagcagtcagtgaaggatcacatcgtggacccccgtgataac
atcctgatagagtgtgaagcaaaagggaaccctgcccccagcttccactggacgcgaaac
agcagattcttcaacatcgccaaggacccccgggtgtccatgaggaggaggtctgggacc
ctggtgattgacttccgcagtggcgggcggccggaggaatatgagggggaatatcagtgc
ttcgcccgcaacaaatttggcacggccctgtccaataggatccgcctgcaggtgtcaaaa
tctcctctgtggcccaaggaaaacctagaccctgtcgtggtccaagagggcgctcctttg
acgctccagtgcaaccccccgcctggacttccatccccggtcatcttctggatgagcagc
tccatggagcccatcacccaagacaaacgtgtctctcagggccataatggagacctatac
ttctccaacgtgatgctgcaggacatgcagaccgactacagttgcaacgcccgcttccat
ttcacccacaccatccagcagaagaaccctttcaccctcaaggtcctcaccacccgagga
gttgcagaaagaacaccaagcttcatgtatccccagggcaccgcgagcagccagatggtg
cttcgtggcatggacctcctgctggaatgcatcgcctccggggtcccaacaccagacatc
gcatggtacaagaaaggtggggacctcccatctgataaggccaagtttgagaactttaat
aaggccctgcgtatcaccaatgtctctgaggaagactctggggagtatttctgcctggcc
tccaacaagatgggcagcatccggcacacgatctcggtgagagtaaaggctgctccctac
tggctggacgaacccaagaaccttatcctggctcctggtgaggatggtagactggtgtgt
cgagccaatggaaaccccaaacccactgtccagtggctggtgaatggggaacctttgcaa
tcagcaccacctaacccaaaccgtgaggtggccggagacaccatcatcttccgggacacc
cagatcagcagcagggccgtgtaccagtgcaacacctccaacgagcatggctacctgctg
gccaacgccttcgtcagtgtgctggatgtgccgcctcggatgctgtcgccccggaaccag
ctcattcgagtgattctttacaaccggacgcgactggactgtcctttctttgggtctccc
atccccacactgcgatggtttaagaatgggcaaggaagcaacctggatggtggcaactac
catgtttatgagaacggcagtctggaaattaagatgatccgcaaagaggaccaaggcatc
tacacctgtgtcgccaccaacatcctgggcaaagctgaaaaccaagtccgcctggaggtc
aaagaccccaccaggatctaccggatgcctgaagaccaggtggccaaaaggggcaccacg
gtgcagctggagtgtcgggtgaagcacgacccctccctgaaactcaccgtctcctggctg
aaggatgacgagccgctctatattggaaacaggatgaagaaggaagatgactccctgacc
atctttggtgtggcagagcgggaccagggcagttacacgtgtgttgccagcaccgagcta
gaccaagacctggccaaggcctacctcaccgtgctagctgatcaggccactccaactaac
cgtttggctgccctgcccaaaggacggccagaccggccccgggacctggagctgaccgac
ctggccgagaggagcgtgcggctgacctggatccctggggatgctaacaacagccccatc
acagactacgtcgtccagtttgaagaagaccagttccaacctggggtctggcatgaccat
tccaagtaccccggcagcgttaactcagccgtcctccggctgtccccgtatgtcaactac
cagttccgtgtcattgccatcaacgaggttgggagcagccaccccagcctcccgtccgag
cgctaccgaaccagtggagcaccccccgagtccaatcctggtgacgtgaagggagagggg
accagaaagaacaacatggagatcacgtggacgcccatgaatgccacctcggcctttggc
cccaacctgcgctacattgtcaagtggaggcggagagagactcgagaggcctggaacaac
gtcacggtgtggggctctcgctacgtggtggggcagaccccggtctacgtgccctatgag
atccgagtccaggctgaaaatgacttcgggaagggccctgagccagagtccgtcatcggt
tactccggagaagattatcccagggctgcgcccactgaagttaaagtccgagtcatgaac
agcacagccatcagccttcagtggaaccgcgtctactccgacacggtccagggccagctc
agagagtaccgagcctactactggagggagagcagcttgctgaagaacctgtgggtgtct
cagaagagacagcaagccagcttccctggtgaccgcctccgtggcgtggtgtcccgcctc
ttcccctacagtaactacaagctggagatggttgtggtcaatgggagaggtgatgggcct
cgcagtgagaccaaggagttcaccaccccggaaggagtacccagtgcccccaggcgtttc
cgcgtccggcagcccaacctggagacaatcaacctggagtgggatcatccggagcatcca
aatgggatcatgattggatacactctcaaatacgtggcctttaacgggaccaaagtagga
aagcagatagtggaaaacttctctcccaatcagaccaagttcacggtgcaaagaacggac
cctgtgtcacgctaccgctttacccttagcgccaggacacaggtgggctctggggaagcc
gtcacagaggagtcaccagcacccccgaatgaagctactccaaccgcagctcctcccaca
ttgcccccgactactgtgggtgcgacgggcgctgtgagcagtatcgatgctactgccatt
gctgccaccaccgaagccacaacagtccccatcatcccaactgttgcacctaccaccatc
gccaccaccaccgtcgccacaactactacaaccactgctgccaccaccaccaccacggag
agtcctcccaccaccacctccgggactaagatacacgaatccgcccccgatgagcagtcc
atatggaacgtcacggtgctccccaacagtaaatgggccaacatcacctggaagcacaat
ttcgggcccggaactgactttgtggttgagtacatcgacagcaaccatacgaaaaaaact
gtcccagttaaggcccaggctcagcctatacagctgacagacctctatcccgggatgaca
tacacgttgcgggtttattcccgggacaacgagggcatcagcagtaccgtcatcaccttt
atgaccagtacagcttacaccaacaaccaagcggacatcgccacccagggctggttcatt
gggcttatgtgcgccatcgccctcctggtgctgatcctgctcatcgtctgtttcatcaag
aggagtcgcggcggcaagtacccagtacgagaaaagaaggatgttccccttggccctgaa
gaccccaaggaagaggatggctcgtttgactatagtgatgaggacaataagcccctgcag
ggcagtcagacatctctggacggcaccatcaagcagcaggagagtgacgacagcctggtg
gactacggcgagggtggcgagggccagttcaacgaagacggctccttcatcggccagtac
acggtcaaaaaggacaaggaggaaacagagggcaacgaaagctcagaggccacgtcacct
gtcaatgctatctactctctggcctaa
DBGET
integrated database retrieval system