Pongo pygmaeus (Bornean orangutan): 129021645
Help
Entry
129021645 CDS
T10128
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129021645 (CHD6)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129021645 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
129021645
NCBI-ProteinID:
XP_054323339
LinkDB
All DBs
Position
21:complement(43894722..44115176)
Genome browser
AA seq
2717 aa
AA seq
DB search
MKMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDCTTDQEEKIEDVASHCLPQKD
LYTAEEEAATLFPRKMTSHNGMEDSGGGGTGVKKKRKKKEPGDQEGAAKGSKDREPKPKR
KREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDSAARTK
SRKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLTNPSLRSPEESTESTDSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLIPELKD
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAAEKAFEGSPAREL
DVPLPDIDYMEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGTSDIPERGNTDKEDNAEDKVDGLQKQTESSSDGGDGVFGEKKDDSRAAQDG
SDPDKSPWPVSSALTARLRRLVTVYQRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMD
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEQYFY
SFVAMCRNVCRLPTWKDGGPPDTTIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDCYIMNDPQLSFLDAYRNYAQHKR
SDTQAPGNLCCLYQTNSKLYESLTYTQMSRTSESLENEPENLVKVENRDDHLSLPDVTCE
DFISKVQDVISINHDESLLPESLESMMYGKKVLSQEPGSFQESPSINTESRKDVITIPIS
KDGNCQSGGHEAEIASGPTFMGSLEAGGVAQANIKNGKHLLMSISKEGELCCSEAGQRPE
SIGQLEAKCLASPSLNPGNESGFVDMCSLSVCDSKRNLSSDQQLIDLLENKSLESKLILS
QNHSDEEEEEEENEEENLVMAVGMGERPEVLHLTEPTTDISREKNQGFHADETKKGSLEV
ANQTPGLQRAFPPPAACQCHCKHMERWMHGLENDEFEIEKPKAYIPDLFKSKTNTIAMEG
EPTAIPSQPFKVKHELLKEPWKESAEGQDVFPTYPLEGRELKSEDMDFENKDDYDRDGNC
HSQDYPGKYSEEESKSSTSGITGDIGDELQEARAPTIAQLLQEKTLYSFSEWPKDRVIIN
RLDNICHVVLKGKWPSSQQYEPSGTLPTPVLTSSAGSRTSLSEPEAAEHSFSNGAALVAQ
IQKESFLAPVFTKDEQKHRRPYEFEVERDAKARGLEQFSATHGHTPIILNGWHGESAMDL
SCSSEGSPGATSPFPVSASTPKIGAISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRR
DDAATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQATLSTTHPEGPGPATSAP
EPATAASSQAEKSIPSKSLLDWLRQQADYSLEVPGFGANFSDKPKQRRPRCKEPGKLDVS
SLSGEERVPAIPKEPGLRGFLPENKFNHTLAEPILRDTGPRRRGRRPRSELLKAPSIVAD
SPSGMGPLFMNGLIAGMDLVGLQNMRNMPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLP
MMLPGMAAVPQMFGVGGLLSPPMATTCTSTAPASLSSTTKSGTAVTEKTAEDKPSSHDVK
TDTLAEDKPGPGPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAM
QQARHSEIVGLESQKRKKKKTKGDNPNSHPEPAPSCEREPSGDENCAEPSSAPLPAEREH
GAQAGEGALKDSNNDTN
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcagttgtcaaatttaaaagttttgaatcac
tccccaatgtctgatgcctctgtcaattttgactacaaatctccatccccatttgactgc
accactgatcaagaagagaaaattgaagatgttgctagtcactgtctgcctcagaaggac
ctgtatactgctgaagaggaagctgctaccctttttcctaggaaaatgacgtcccataat
gggatggaggacagtggaggaggaggtactggagtgaagaagaaacggaagaaaaaggag
ccaggagaccaagagggtgcagcaaagggaagcaaggacagagagcccaagccaaagagg
aaacgagaaccgaaagagccaaaggaacccaggaaggccaaggagccgaaaaaggccaag
gagcacaaggagccgaagcaaaaagatggggcaaaaaaggcacggaagccccgggaggcc
tcgggcaccaaggaggccaaagagaagaggagctgcactgactctgcagccaggacgaag
tccaggaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaactacagtggagagtttagagctggatcagggcctgacgaacccatct
ctgcggagtcctgaggagtccactgagtctacagacagccagaaacgacgctcaggaagg
caagtaaagcgcagaaaatacaatgaggacctggacttcaaagtggtggatgatgatggg
gaaacaattgctgttcttggagctggtcgaacatctgcactctcagcctctacactggcc
tggcaggcggaggagcctccagaagatgatgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggttcacccaggagaacctccattcgacttggagctgttctacgtt
aagtatagaaatttttcctacttacattgtaaatgggccacaatggaagagctcgaaaag
gatcctcgcatcgcgcagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttacggagcctgatgaagacttgttcaatccagactatgtagaagttgatcgcatc
ttggaggtggcccacaccaaggatgcagaaacaggggaggaggtaacacattacctggtg
aagtggtgctcactaccatatgaagaaagcacatgggagctagaggaagatgtggatcct
gcaaaagttaaagaatttgaatctcttcaagttctccctgaaattaagcatgtggagcgg
cctgcttcagactcctggcagaaactcgagaagtctcgcgagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgtattttggctgatgagatgggcctagggaaaaccatccagtccatcacattcctt
tcagaaatatttctgagaggaatccacggcccttttctcattatcgcccctctctccacc
atcactaactgggagcgggagttccggacatggacagagatgaatgccattgtgtaccac
ggtagccagatcagcaggcagatgatccagcagtatgaaatggtgtacagagatgcccag
ggaaaccccctttcaggagtcttcaagttccatgtcgtcatcacaacatttgaaatgatc
ctagcagactgcccagagttgaagaagattcactggagctgtgtgataattgatgaagcc
cacagactgaagaataggaactgcaaacttctggagggtctaaagcttatggccctggaa
cataaagtgcttctcactggaacacccttgcagaactctgtggaggagctcttcagtttg
ttaaattttctggagccatcacaatttccttcagagaccgctttcttggaggaatttgga
gatctgaaaacagaggaacaggtaaagaaactgcagtctatcctaaaaccaatgatgctt
cggcggctgaaagatgatgtggaaaagaaccttgctcccaaacaagagacgatcattgag
gtggaactgaccaatattcagaaaaagtactaccgtgccatcctcgagaagaacttttcc
ttcctgaccaagggggcaaatcagcacaacatgcccaatctcatcaacaccatgatggag
ctgaggaagtgctgtaaccatccctacctgatcaatggagcagaggagaaaattctagaa
gatttccgaaaaacccacagccctgatgcccctgactttcagctgcaggccatgattcag
gcagcagggaagcttgtgttgattgataaactactccctaagctgattgcaggtggccac
aaagtactcatcttctcccagatggtgcgctgcctcgacatcctggaagattacctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagattcagaccgctttgtctttcttctgtgcaccaga
gcgggaggcctggggatcaatctcacagctgctgatacctgcatcatatttgattctgac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccgcataggccagagcaaa
gctgtgaaggtgtatcgcctcatcactcgaaattcctacgagcgcgagatgtttgacaag
gccagcctaaagctggggctggacaaggctgttcttcaggacatcaaccgaaagggcggc
accaatggggtacagcagctctcaaaaatggaggtagaggacctactccggaaaggtgct
tatggagccttaatggatgaagaagatgaaggctccaagttctgtgaagaagacatagac
cagattctgcagaggagaacgcacaccatcaccatccagtctgaggggaaagggtccact
tttgccaaggctagctttgtggcttcaggaaacagaacagatatttccttagatgatcct
aacttttggcagaaatgggctaaaatagctgaactagatactgaagcaaagaatgaaaag
gaaagcttagtgatcgaccgacctcgcgtgagaaagcagaccaaacactacaactcgttt
gaggaagacgagctcatggagttttcagagttagacagcgactcagacgaaaggcccaca
agatccaggcgcctcaatgacaaagccaggcgctacctccgagcggagtgcttccgggta
gagaagaacctgctcatctttggctggggccggtggaaggacatcctgactcatggccga
ttcaagtggcatctgaacgagaaggacatggagatgatttgccgtgccctcctggtgtac
tgtgtcaagcattataagggggacgagaagatcaagagtttcatttgggaactgatcaca
cctaccaaagatgggcaagcccagaccctccagaaccactcaggcttgtctgccccagtc
cccagagggaggaaggggaagaagacgaagaaccagctgctaatcccagagctaaaggat
gcagattggctagccacctgcaaccccgaggtggtcttgcatgatgatggctataagaaa
cacctcaaacagcactgcaacaaagtacttttgcgagttcggatgctgtactacctaaaa
gctgaaatactgggagaagcagctgagaaagcatttgaaggatctcctgccagagagctg
gatgtacctctgcccgacatcgactacatggagatcccagtggattggtgggatgctgaa
gccgataagtcccttctcattggcgtgttcaagcatggttatgaaaggtacaatgccatg
cgagcagacccagcactttgcttcctggagaaagttgggatgcccgatgagaagtccctt
tctgcagaacagggtgttacagatgggacctcagacattcctgaaagaggcaacacagat
aaagaagacaatgctgaggacaaagtagatggcctccagaaacaaacggagagttccagt
gatggaggtgatggcgtttttggcgaaaagaaggatgacagccgggcagcccaggatggc
tccgacccagacaaatcgccctggccagtttcctccgccctcacagctcgtctcagacgt
ctggtcactgtttaccagcgctgcaaccgcaaggaactgtgccggcctgaaattctggga
ccaggtaaccaaggatattgggttcaggaagagatgttcaggagaacctcagaaatggac
ctcatcaacaaggaagcccaaaagaggtggactaggagagaacaagcagacttctataga
acagtgtcttcctttggtgttgtttacgatcaagaaaagaaaacctttgactggacacag
ttccgcatcatttcccgtttggacaagaagtcggatgagagcctggaacagtatttttat
agttttgtggccatgtgccggaatgtctgtcgtctacccacatggaaagatggcggtccc
ccagataccaccatctacgttgaacccatcactgaggaacgtgctgcaagaactctgtac
cgcattgaactgttacggaaagtccgagagcaagtgctcaagtgccctcagctgcatgaa
cgcctccagctgtgcaggcccagcctctacctcccagtctggtgggagtgtgggaagcat
gatcgagacttgctcatcggcactgccaaacatgggttgaaccgcactgactgttacatc
atgaatgacccccagctgtccttcctggatgcctatagaaactatgcccagcataaaaga
tctgacacccaggcaccaggaaatctctgttgcctttaccagaccaactccaagttatat
gaatctcttacatatactcaaatgagtaggacttcagagtcccttgaaaatgaacctgag
aatctagtgaaagtagaaaacagagatgatcatctcagcctgcctgatgtgacatgtgaa
gactttatttctaaagttcaggatgtcatttccatcaaccatgatgaaagtctgctgcct
gagtccttagagagcatgatgtatggtaagaaggtgctcagccaagaaccaggctctttt
caggagagcccaagtatcaatactgaatctagaaaagatgttattaccatcccaataagc
aaagatgggaactgccaatctggtggccatgaggcagaaatagcttctggccctactttt
atgggtagcttagaagcaggaggagtagctcaagcaaacatcaaaaatggaaaacatttg
ttgatgtctatttcaaaggaaggggagctctgctgcagtgaggcaggacagagacctgaa
agcattggccagctggaagccaagtgtttagcttccccttccttgaatccaggaaatgaa
agtgggtttgtagatatgtgcagtcttagtgtctgtgactccaaaagaaacctgtcatca
gatcagcaattaattgatttattggaaaacaaaagcttagaaagtaaattgattttgagt
cagaaccacagtgatgaggaggaggaagaggaggaaaacgaggaggaaaacttagtcatg
gcagtaggcatgggggaaaggccagaggtattgcatctcacagagcccactactgacatc
tcaagggaaaagaaccaaggcttccatgcagatgaaaccaagaaaggaagcttagaggtg
gcaaaccagactcctggactacagagggctttcccccctccagcagcctgtcagtgccac
tgcaaacacatggagaggtggatgcatggcctcgagaatgatgaatttgaaatcgagaaa
cccaaggcttatatcccagatctgttcaaaagtaaaaccaatactatcgccatggagggt
gaacccactgctattccatcacagccatttaaagtgaagcatgagcttttaaaagaacct
tggaaagaaagtgcagaggggcaagacgttttccccacatatcctcttgaaggacgtgag
ctcaaatcagaagacatggattttgagaataaagatgattatgatagagacggaaactgc
catagtcaagattatccagggaagtattctgaagaggagagcaagagctcaacatcgggc
atcacaggagacattggggatgagctacaggaggctcgagctcccactattgctcagctg
ctacaggagaaaactctctattccttctctgagtggccaaaggaccgcgtgataattaac
cgcctagataatatctgccacgtggtgttaaaggggaagtggccctccagccagcagtat
gagccctcaggcacactgcccaccccggtattaaccagcagtgctggttctcgaaccagc
ctctcagagccggaagcagcagaacacagcttcagcaatggtgcagcattggtggcccag
atccagaaggagagcttcttagctccagtattcacaaaggatgaacaaaagcacaggcgt
ccctatgagtttgaggtggagagggatgcaaaggctcggggcctggagcagttttctgcc
acccacgggcacacccctatcatcctcaatggctggcatggggagtcagctatggacctc
tcctgctcatcagaggggtccccaggagccacatcccctttcccagtgagcgccagcacc
cctaagattggggctatcagttcacttcagggagcccttggcatggacttgtctgggatt
ctgcaagctggcctgatccatcctgtgactggacagattgtcaatggaagcctcagaaga
gatgatgcagccacaaggaggcggagagggaggcggaaacatgttgaaggagggatggac
ctcatctttttgaaggagcagacacttcaggcgggaatcttggaagtccatgaagaccca
gggcaggccaccttgagcaccacacaccctgaggggccagggcctgccacctcggctcct
gagccagccacagcagccagcagccaagccgagaaatccattcccagcaagagtctgctt
gactggctgaggcagcaggctgactactccttagaagttcctggctttggggcaaatttt
tcagacaaaccaaagcagaggaggccacgctgtaaagaacctggaaaattagatgtcagc
tccctgagcggggaagagagggttcctgccatccccaaggagccaggactgagggggttt
cttccagaaaacaagttcaatcacaccctggctgagcctattcttcgagatacgggcccc
cgcaggagggggaggcggcctcggagcgaactcctgaaggctccttccattgtagcagac
tctccctctggaatggggccactgttcatgaatggactgattgctgggatggacctggta
ggacttcagaacatgagaaatatgccaggcatccccctcaccgggctggtggggtttcca
gctggctttgccacaatgccaactggtgaagaggtcaaaagtaccctaagcatgctgccc
atgatgctgccaggcatggctgctgtgccccagatgtttggtgttgggggactcctcagt
ccacccatggcaaccacctgcacttccactgctccggcgtctctatcaagcacaacgaaa
agtggtacggcagtgactgaaaagactgcggaagacaagccgagtagccatgatgtgaaa
acagacactttagctgaggacaagcctggtccaggtccattttctgatcagtctgaacct
gcaataactactagtagtcctgtggcttttaacccatttctcatcccaggagtatctcct
ggactcatttacccatccatgttcctctcccctggtatgggcatggctctgccagccatg
cagcaggccagacactcggaaatagtaggtctggagagccagaagaggaagaagaagaag
acaaagggggacaaccccaactcccacccagagcctgctcccagctgcgaaagggagccc
agcggtgatgagaactgtgccgaacccagtagtgcccctttgcccgcagagagagaacat
ggggcacaggctggggagggggcactcaaagactccaacaacgacaccaattag
DBGET
integrated database retrieval system
