Pongo pygmaeus (Bornean orangutan): 129021831
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Entry
129021831 CDS
T10128
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03250
Viral life cycle - HIV-1
ppyg04623
Cytosolic DNA-sensing pathway
ppyg05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129021831 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
129021831 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
129021831 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129021831 (SAMHD1)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129021831 (SAMHD1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
129021831
NCBI-ProteinID:
XP_054323732
UniProt:
K4JU85
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Position
21:complement(39323114..39384603)
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AA seq
626 aa
AA seq
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MQRADSEQPSKRPRCDDSPRTPSSTPSAEADWSSGLELDPDYKTWDPEQVCSFLGRGGFE
EPGLLKNILENKITGALLPCLDESHFENLGVSSSGERKKLLSYIQRLVQIHIDTMKVIND
PIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVR
ALGEKQPELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMM
FEHLINSNGIKPIMEQYGLIPEEDICFVKEQIVGPLESPVEDSLWPYKGRPKKKSFLYEI
VSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCKVDNELRICARDKEVGNLY
DMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYGISTAIDDMEAYT
KLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQPTGQVKIKREDYESLPKEV
ANAKPKELLDVKLKAEDFIVDVINMDYGMQEKNPIDHVSFYCKTAPNRAIRITKNQVSQL
LPEKFAEQLIRVYCKKVDRKSLYAAKQHFVQWCADRNFTKPQDGDVIAPLITPQKKEWND
STSVQNPTRLREASKSRVQLFKDDPM
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagccgactccgagcagccctccaagcggccccgttgcgatgacagcccgaga
accccctcaagcaccccttccgcagaggcagactggtcctcgggcctggaactcgatccc
gactacaagacatgggatccggagcaggtgtgctccttcctcgggcgcggtggctttgaa
gagccggggctgctgaagaacatcctagaaaacaaaatcacaggcgcattactgccctgt
cttgatgagtctcattttgaaaatcttggagtaagttcctcgggggagaggaagaagctg
cttagttatatccagcgattggttcaaatccacattgatacaatgaaggtaattaatgat
cctatccatggccacattgagctccaccctctcctcgtccgaatcattgatacacctcaa
tttcaacgtcttcgatacatcaaacagctgggaggtggttactatgtttttccaggagct
tcacacaatcgatttgagcatagtctaggggtggggtatctagcaggatgtctagttcgc
gcactgggtgaaaaacaaccagagctgcagataagtgaacgagatattctctgtgttcag
attgctggactttgtcatgatcttggtcatgggccattttctcacatgtttgatggacga
tttattccacttgctcgcccggaggtgaaatggacgcatgaacaaggctcagttatgatg
tttgagcaccttattaattctaatggaatcaagcctatcatggaacaatatggtctcatc
cctgaagaagatatttgctttgtcaaggaacaaattgtaggaccacttgaatcacctgtc
gaagattcattgtggccatataaagggcgtcctaaaaagaaaagcttcctttatgagata
gtgtctaataaaagaaatggcattgatgtggacaaatgggattattttgccagggactgc
catcatcttggaatccaaaataattttgattacaagcgctttattaagtttgcccgtgtc
tgtaaagtagacaatgagttgcgtatttgtgctagagataaggaagttggaaatctgtat
gacatgttccacactcgcaactctttacaccgtagagcttatcaacacaaagttggcaac
attattgatacaatgattacagatgctttcctcaaagcagacgactacatagagattaca
ggtgctggaggaaaaaagtatggcatttctacagcaattgacgacatggaagcctatact
aagctgacagataacatttttctggagattttatactctactgatcccaaattgaaagac
gcacgagagattttaaaacaaattgaataccgtaatctattcaagtatgtgggtgagacc
cagccaacaggacaagtaaagattaaaagggaggactatgaatctcttccaaaagaggtt
gccaatgctaaacccaaagaattgctagacgtgaaactgaaggctgaagattttatagtg
gatgttatcaacatggattatggaatgcaagaaaagaatccaattgatcatgttagcttc
tattgtaagactgcccccaacagagcaatcaggattactaaaaaccaggtttcacaactt
ctgccagagaaatttgcagagcagctgattcgagtatattgtaagaaggtggacagaaag
agtttgtatgccgcaaaacaacattttgttcagtggtgtgcagacagaaatttcaccaag
ccgcaggatggcgatgttatagccccactcataacacctcaaaaaaaggaatggaatgac
agtacttcagtccaaaatccaactcgcctccgagaagcatccaaaagcagagtccagctt
tttaaagatgacccaatgtga
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