KEGG   Pongo pygmaeus (Bornean orangutan): 129022378
Entry
129022378         CDS       T10128                                 
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
  KO
K13167  SR-related and CTD-associated factor 4
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Brite
Transcription machinery [BR:ppyg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     129022378 (SCAF4)
Spliceosome [BR:ppyg03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR proteins
    129022378 (SCAF4)
SSDB
Other DBs
NCBI-GeneID: 129022378
NCBI-ProteinID: XP_054324461
LinkDB
Position
22:complement(44511538..44573570)
AA seq 1148 aa
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL
PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ
PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA
TVPAAAAPTAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP
PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC
IQDVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE
RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI
PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT
YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK
PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP
PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS
IGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI
GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP
PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQQPQPQPPQQP
QQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNR
NDDRENSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKE
KPEVTDRAGGNKTVEPPISQVGNVDTASELEKGESEAAVLKPSEELPAEATSSVEPEKDS
GSAAEAPR
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctagagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccaggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaac
ggagtgttcaaaattgaaattattcaacctcttttggacatggcagcaggaaccagtaat
gcagccccagtagcagaaaatgttaccaataatgaaggctcacctccacctccagtaaaa
gtttcttctgaacctcccacacaagccactccaaactccgtcccagctgtaccacagttg
cccagctctgatgcttttgctgctgtggctcagctgtttcagacaactcaaggccaacag
cttcagcagatccttcagacttttcaacagcctccaaaaccacagtctcctgcccttgac
aatgctgtgatggctcaggttcaggctatcacagctcagttaaagacaactcctacacaa
ccatctgaacaaaaagctgctttccccccacctgaacagaaaactgcatttgacaagaag
ttgcttgatagatttgactatgatgatgagccagaagctgtggaagaatcaaagaaagag
gataccactgccgtcaccacaacagcacctgctgccgctgtaccccctgcacccaccgcc
accgtgcctgctgctgctgcacccactgctgcctctcctcctcctccacaggcaccattt
ggctttcctggagatggcatgcagcagccagcatacacacagcatcaaaatatggatcag
tttcagccacgaatgatgggaatacaacaggatccaatgcaccatcaggttccccttcct
cctaatggacaaatgccaggatttggacttcttcctacacctccatttcctccgatggct
cagcctgtgattcctccaactccaccagtgcagcagcctttccaagcttcttttcaggca
caaaatgaaccacttacacagaagccacatcagcaggaaatggaagtagaacaaccttgt
attcaagacgttaagcgacatatgtctgataacagaaagtcaagatctaggtcagcatcc
aggtcaccaaaaaggaggcgatctagatctggttctagatctcgaaggtctcggcatcga
cgttctcgatctcggtccagggatagacgccgacattctccccgatctcgatcccaagaa
agacgggatcgagaaaaagagagagaacgtcgacaaaaaggcctccctcaagtgaaaccg
gaaactgcaagtgtttgcagtactaccctctgggtggggcagctggacaaaagaactact
cagcaggatgttgccagtctcttggaagagtttggtccaattgaatcaattaatatgatt
cctcccaggggttgtgcctatattgttatggttcataggcaagatgcctatcgtgccctg
cagaaactgagccgaggaaactataaagtgaaccagaaatccataaagattgcctgggcc
ttaaacaaaggaataaaggcagattataagcagtattgggatgtagaacttggtgttact
tatattccatgggacaaagtcaagcctgaggaactggagagtttttgtgaaggaggaatg
ttggacagtgacacacttaacccagattggaaaggaattcctaagaagcctgaaaatgaa
gttgctcaaaatggaggtgctgaaacctcacacacagaaccagtatcacccatacctaaa
ccattacctgttcctgtccctcctattcctgttcctgcacctataacagtgccacctcca
caggtcccaccacatcaaccgggtccacctgtagttggtgctctccagccacctgctttc
acgcctcctctgggaataccgcctccaggctttggtcctggtgttcctcctccccctcct
cctccaccatttttgcgcccaggattcaacccaatgcatttaccaccaggttttctgcct
cctggacccccacctcctataactccaccagtatccattcctcctcctcacactccacca
ataagcatcccaaactctactatcgctggtataaatgaagacactacaaaagacttatct
attggaaatcccattccaacagtggtgtctggggctagaggaaacgccgagtctggtgac
agcgtgaaaatgtatggctctgctgtgccacctgctgcacccacgaatctgcccactcct
cctgtaacccagcctgtttcacttcttggcactcaaggagttgcccccggtcctgtaatt
ggacttcaggcaccatctactggtcttcttggcgcccggcccggtctcatcccactccag
cgccctccaggaatgcccccacctcacttacagaggttccctttgatgccaccccgtccc
atgccaccgcacatgatgcacagaggcccaccgccaggaccagggggctttgcgatgcct
ccacctcatggaatgaaaggtcccttcccaccgcatggcccctttgttaggcctggtgga
atgccagggctcgggggcccagggccaggcccagggggtcctgaagacagagacggaagg
caacagccgccgcagcagccacagcagcagcagccacagccgcagccgccccagcaacca
cagcagcagcagcagcagcagccgccaccatcacaacagcctccaccaacacagcagcag
ccacagcagtttagaaatgataacaggcagcagttcaattcaggtagagaccaagaaagg
tttggaagaagatcttttggaaatagggtggaaaatgaccgggaacggtatgggaaccgt
aatgatgatagagagaatagtaaccgtgacaggagagagtggggaagaaggagccctgac
cgggacaggcacagagacttggaagagagaaatagacgctctagtgggcatcgagacaga
gagagagattctagagatagagagtctcgtagagagaaggaagaagcccgaggaaaggaa
aagcctgaggtgacagacagggcaggtggtaacaaaaccgttgaacctcccattagccaa
gtgggaaatgtagacactgcttcagaacttgagaagggggagtctgaggctgcagtccta
aagccttctgaagagttacctgctgaggctacctcatccgttgaacccgaaaaggattct
ggctcagcagcagaggctcctcgttag

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