Pongo pygmaeus (Bornean orangutan): 129023223
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Entry
129023223 CDS
T10128
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03013
Nucleocytoplasmic transport
ppyg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129023223 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129023223 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129023223 (NUP50)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129023223 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
129023223
NCBI-ProteinID:
XP_054325771
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Position
23:56155621..56177426
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AA seq
468 aa
AA seq
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MAKRNAEKELTDRNWDQEDEAEEVGTFSLASEEVLKNRAIKKAKRRNVGFESDSGGAFKG
FKGLVVPSGGGRFPGFGSGAGGKPLEGLSNGNNITSAPPFTSAKAAAEPKVAFGSLPANG
PTALVDKVSNPKTNGDSQQPSSSGLASSKACVGSAYHKQLAALNCSVRDWIVKHVNTNPL
CDLTPIFKDYEKYLANIEQQHGNSGRNSESEPNKVAAETQSPSLFGSTKLQQESMFLFHG
NKTEDTPDKKVEVASEKKTDPSSLGATSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNS
SVFGKDITQSKPVSSPFPTKPLEGQAEGYSGECKGGDEEENEEPPKVVVTEVKEEDAFYS
KKCKLFYKKDNEFKEKGIGTLHLKPTANQKTQLLVRADTNLGNILLNVLIPPNMPCTRTG
KNNVLIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKKDA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaatgccgagaaggaactgacagataggaattgggatcaagaagatgaa
gctgaagaggtgggaacattctccctggccagtgaggaagtcttgaagaatagagccata
aagaaagcaaagcgcagaaatgttggattcgaatctgacagtggaggagcctttaaaggt
tttaaaggtttggtggtaccttctggaggaggacggtttcctggatttggtagtggcgct
ggagggaagcctttggaaggactgtcgaatggaaacaacataaccagtgcccctcccttc
accagtgcaaaggcagcggcagagcccaaggtagcctttggttctcttcctgcaaatggc
cctaccgccttggttgataaagtttcaaatcccaaaactaatggggacagtcagcagccc
tcctcctctggccttgcttccagtaaagcttgtgtcggaagtgcctatcacaagcagttg
gccgccttgaactgctccgtgcgggattggatagtgaagcacgtgaatacaaaccccctc
tgtgatctgacacctatctttaaagactatgagaaatatttagcaaacattgaacagcaa
cacgggaacagtggcaggaattctgaaagtgaacctaacaaagtggcggctgaaacacag
tctccttccctttttggctcaacaaaattacagcaagagtcaatgtttttgtttcatggc
aacaaaactgaagatacacctgacaagaaggtggaggtggcatctgaaaagaaaacggac
ccatcatcactaggagcgacaagtgcctcatttaatttcggcaagaaagttgatagctct
gttttgggctcattaagctccgtccccctgactggattttctttctcccctggaaactcc
agtgtatttggcaaagatattacccagagtaaaccagtctcttcaccatttcccactaaa
ccattggagggccaagcggagggttacagtggtgaatgcaaaggtggagatgaagaagag
aatgaagagccacccaaagtagtagttaccgaagtaaaagaagaagatgctttttactcc
aaaaagtgtaaactattttacaagaaagataatgagtttaaagagaaaggcataggtact
ctgcatttaaaacctacagcaaatcagaagacacagcttttggtgcgggcagacaccaat
ttaggcaacatattgctgaatgttctgattccacccaatatgccatgtacgcgaacaggg
aagaataacgttcttatcgtctgtgttccaaatccaccaattgacgagaagaatgccacc
atgccagtcaccatgttgattcgggtgaaaaccagcgaggatgcagacgagttgcacaaa
attttactggagaaaaaggatgcctga
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