Pongo pygmaeus (Bornean orangutan): 129023486
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Entry
129023486 CDS
T10128
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03013
Nucleocytoplasmic transport
ppyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129023486 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
129023486 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129023486 (THOC5)
03041 Spliceosome [BR:
ppyg03041
]
129023486 (THOC5)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129023486 (THOC5)
Spliceosome [BR:
ppyg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129023486 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
129023486
NCBI-ProteinID:
XP_054326212
LinkDB
All DBs
Position
23:complement(40405025..40454553)
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AA seq
694 aa
AA seq
DB search
MSSESGKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDH
GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSHLVKWVTIAHED
YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGE
KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcgggcaaaaaacggaagcccaaagtgatccgaagcgatggagcccca
gctgaaggaaagcggaatcgatctgacaccgagcaggaaggtaaatactacagtgaggag
gccgaggtggatctgcgggaccctggcagagactatgagttatacaagtatacctgccag
gagctacagaggctgatggctgagatccaagacctgaagagtaggggtggcaaggatgtg
gcaatcgaaatagaagaacggaggatccagagctgtgtgcatttcatgactctaaagaag
cttaaccgattagcccacatcaggttgaagaaaggaagagatcagacccacgaggctaag
cagaaagtagatgcctatcacctgcagctccagaacctgttgtatgaggtgatgcaccta
cagaaggagatcaccaaatgtttggagtttaagtcaaagcatgaagaaattgatctggtc
agtttagaggagttttataaggaggctccaccagatatcagcaaggccgaagtcaccatg
ggagaccctcaccagcaaacactagcacgtctggactgggagctggagcagcggaaaagg
ctggcggagaagtaccgagagtgcctatccaacaaggagaagattctcaaggagattgag
gtgaagaaggagtacctgagcagcctccagccccgcctcaacagcatcatgcaggcttcc
cttccggtgcaggagtacttgtttatgccatttgaccaggctcacaagcagtatgagaca
gccagacacctgccgcctcccctctatgtcctctttgttcaggccactgcgtatgggcag
gcctgtgctcatatgaaatcctcccagccccctagacaggataagacgttatctgtggca
atcgaaggcagtgtggatgaagccaaggctctgttcaagcctccagaggactcccaagat
gacgagagtgactcggatgctgaggaggagcagaccacgaaacgccggagacccacgctg
ggggttcagttggacgacaaacgcaaagagatgctgaagaggcacccactgtctgtcatg
ctcgacctgaagtgcaaagatgacagtgtgcttcacctgactttctactacctcatgaac
ctcaacatcatgacagtaaaagccaaagtgacgactgccacggagctgatcacccccatc
agtgcaggtgacttgctgtctcctgactcagtcctgagttgcttgtatcctggggatcat
ggaaagaaaactccgaatccagccaatcagtatcagtttgataaagttggcatcctgact
ttgagcgactatgtacttgagctaggtcacccctatttgtgggtacagaagctgggtggc
ctccacttccccaaagagcagccccagcaaacagtgattgctgaccactcgctgagcgcc
agccacatggaaaccactatgaaacttctgaagaccagggtgcagtcccgcctggccctc
cacaaacagtttgcatccctagaacatggcattgtgccagttaccagtgattgccagtac
ctcttccctgccaaggttgtctctcacctggtgaaatgggtgacaattgcccatgaggat
tacatggagctgcatttcaccaaagacattgtggatgcgggactggctggggacaccaat
ctctactacatggcgctcatcgaaaggggcacagccaaactgcaggccgctgtggtgttg
aaccctggctactcctccatcccacctattttccagctttgtttgaactggaaaggggag
aaaaccaacagcaacgatgacaacattcgggccatggagggcgaagtcaatgtgtgctac
aaggagctgtgtggcccttggcccagccaccagctgttgaccaaccagctgcagcggctg
tgtgtgctgctggatgtttacctggagaccgagagccatgacgacagtgtggaggggccc
aaggaatttccccaggagaagatgtgtctgcggctcttcaggggtcccagcaggatgaag
ccgtttaaatacaaccatcctcagggattcttcagccatcgctga
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