Pongo pygmaeus (Bornean orangutan): 129024873
Help
Entry
129024873 CDS
T10128
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129024873 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppyg01009
]
129024873 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppyg04515
]
129024873 (PCDH11X)
Protein phosphatases and associated proteins [BR:
ppyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129024873 (PCDH11X)
Cell adhesion molecules [BR:
ppyg04515
]
Cadherins
Protocadherins
129024873 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6377
ROH1-like
Motif
Other DBs
NCBI-GeneID:
129024873
NCBI-ProteinID:
XP_063516918
LinkDB
All DBs
Position
X:95687881..96524972
Genome browser
AA seq
1366 aa
AA seq
DB search
MRTERQWVLIQIFQVLCGLIQQTVTSVPGMDLLSGTYIFAVLLACVVFHSGAQEKNYTIR
EEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARI
DREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPEN
SAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREE
KDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQL
HATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASD
GGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPINDTVVLSENIPLNTKIALITVTDKDAD
HNGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAM
LFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPP
EFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFT
HNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISF
DREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNP
GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLV
KANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYV
KILVAAVAGTVTVVVVIFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMKKKK
KKKKHSPKNLLLNFVTIEETKADDVDSDGNRITLDLPIDLEEQTMGKYNWVTTPTTFKPD
SPDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVACDSISKCSSSSSDPYSV
SDCGYPVTTFEVPVSVHTRPPMKEVVRSCTPMKESTTMEIWIHPQPQSQRRVTFHLPEGS
QESSSDGGLGEHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLK
KAAEITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQAS
TQHHSPPVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALRHSPPSAQAS
ALCYSPPLAQAAAISHSSPLPQVIALHRSQAQSSVSLQQGWVQGAEGLCSVDQGVQGSAT
SQFYTMSERLHPSDDSIKVIPLTTFTPRQQARPSRGDSPIMEEHPL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgaacgacagtgggttttaattcagatatttcaagtgttgtgcgggttaata
caacaaactgtaacaagtgtacctggtatggacttgttgtccgggacgtacattttcgcg
gtcctgctagcatgcgtggtgttccactctggcgcccaggagaaaaactataccatccga
gaagaaatgccagaaaacgtcctgataggcgacttgttgaaagaccttaacttgtcgctg
attccaaacaagtccttgacaactgctatgcagttcaagctagtgtacaagaccggagat
gtgccactgattcgtattgaagaggatactggtgagatcttcactactggcgctcgcatt
gatcgtgagaaattatgtgctggtatcccaagggatgagcattgcttttatgaagtggag
gttgccattttgccggatgaaatatttagactggttaagatacgttttctgatagaagat
ataaatgataatgcaccattgttcccagcaacggttatcaacatatcaattccagagaac
tcggctataaactctaaatatactctcccagcggctgttgatcctgacgtaggaataaac
ggagttcaaaactacgaactaattaagagtcaaaacatttttggcctcgatgtcattgaa
acaccagaaggagacaagatgccacaactgattgttcaaaaggagttagatagggaagag
aaggatacctatgtgatgaaagtaaaggttgaagatggtggctttccgcaaagatccagt
actgctattttgcaagtaagtgttactgatacaaatgacaaccacccagtctttaaagag
acagagattgaagtcagtataccagaaaatgctcctgtaggcacttcagtgacacagctc
catgccacagatgctgacataggtgaaaatgccaagatccacttctctttcagcaatcta
gtctccaacattgccagaagattatttcacctcaatgccaccactggacttatcacaatc
aaagaaccactggatagggaagaaacaccaaaccacaagttactggttttggcaagtgat
ggtggattgatgccagcaagagcgatggtgctggtaaatgttacagatgtcaatgataat
gtcccatccattgacataagatacatcgtcaatcccatcaatgacacagttgttctttca
gaaaatattccactcaacaccaaaattgctctcataactgtgacggataaggatgcggac
cataatggcagggtgacatgcttcacagatcatgaaatccctttcagattaaggccagta
ttcagtaatcagttcctcctggagactgcagcatatcttgactatgagtccacaaaagaa
tatgccattaaattactggctgcagatgctggcaaacctcctttgaatcagtcagcaatg
ctcttcatcaaagtgaaagatgaaaatgacaatgctccagttttcacccagtctttcgta
actgtttctattcctgagaataactctcctggcatccagttgacgaaagtaagtgcaacg
gatgcagacagtgggcctaatgctgagatcaattacctgctaggccctgatgctccacct
gaattcagcctggatcgtcgtacaggcatgctgacagtagtgaagaaactagatagagaa
aaagaggataaatatttatttacaattctggcaaaagataacggggtgccacccttaacc
agcaatgtcacagtctttgtaagcattattgatcagaatgacaacagcccagttttcact
cacaatgaatacaacttctatgtcccagaaaaccttccaagacatggtacagtaggacta
atcactgtaactgatcctgattatggagacaattcggcagttacgctctccattttagat
gagaatgatgacttcaccattgattcacaaactggtgtcatccgaccaaatatttcattt
gatagagaaaaacaagaatcttacactttctatgtaaaggctgaggatggtggtagagta
tcacgttcttcaagtgccaaagtaaccataaatgtggttgatgtcaatgacaacaaacca
gttttcattgtccctccttccaactactcttatgaattggttctaccatccactaatcca
ggcacagtggtctttcaggtaattgctgttgacaatgacactggcatgaatgcagaggtt
cgttacagcattgtaggaggaaacacaagagatctgtttgcaatcgaccaagaaacaggc
aacataacattgatggagaaatgtgatgttacagaccttggtttacacagagtgttggtc
aaagctaatgacttaggacagcctgattctctcttcagtgttgtaattgtcaatctgttc
gtgaatgagtcagtgaccaatgctacactgattaatgaactggtgcgcaaaagcattgaa
gcaccagtgaccccaaatactgagatagccgatgtatcctcaccaactagtgactatgtc
aagatcctggttgcagctgttgctggcaccgtaactgtcgttgtagttattttcatcact
gctgtagtaagatgtcgccaggcaccacaccttaaggctgctcagaaaaacaagcagaat
tctgaatgggctaccccaaacccagaaaacaggcagatgataatgatgaagaaaaagaaa
aagaagaagaagcattcccctaagaacctactgcttaactttgtcactattgaagaaact
aaggcagatgatgttgacagtgatggaaacagaatcacactagaccttcctattgatcta
gaagagcaaaccatgggaaagtacaattgggtaactacacctactactttcaagcccgac
agccctgatttggcccgacactacaaatctgcctctccacagcctgccttccagattcag
cctgaaactcccctgaattcgaagcaccacatcatccaagaactgcctctcgataacacc
tttgtggcctgtgattctatctccaagtgttcctcaagcagttcagatccctacagcgtt
tctgactgtggctatccagtgacgacctttgaggtacctgtgtctgtacacaccagaccg
ccaatgaaggaggttgtgcgatcttgcacccccatgaaagagtctacaactatggagatc
tggattcatccccaaccacagtcccagcgtcgtgtcacatttcacctgccagaaggctct
caggaaagcagcagtgatggtggactgggagagcatgatgcaggcagccttaccagcaca
tcccatggcctgccccttggctatcctcaggaggagtactttgatcgtgccacacccagc
aatcgcactgaaggggatggcaactccgatcctgaatctactttcatacctggactaaag
aaagctgcagaaataactgttcaaccaactgtggaagaggcctctgacaactgcactcaa
gaatgtctcatctatggccattctgatgcctgctggatgccggcatctctggatcattcc
agctcttcacaagcacaggcctctgctctatgccacagcccaccactgtcacaggcctct
actcagcaccacagcccaccagtgacacagaccattgctctctgccacagccctccagtg
acacagaccatcgcattgtgccacagccctccaccgatacaggtgtctgctctccaccac
agtcctcctctagtgcaggctactgcacttcgccacagcccaccatcagcacaggcctca
gccctctgctacagccctcctttagcacaggctgctgcaatcagccacagctctcctctg
ccacaggttattgccctccatcgcagtcaggcccaatcatcagtcagtttgcagcaaggt
tgggtgcaaggtgctgaaggactatgctctgttgatcagggagtgcaaggtagtgcaaca
tctcagttttacaccatgtctgaaagacttcatcccagtgatgattcaattaaagtcatt
cctttgacaaccttcactccacgccaacaggccagaccctccagaggtgattcccccatt
atggaagaacatcccttgtaa
DBGET
integrated database retrieval system
