Pongo pygmaeus (Bornean orangutan): 129024964
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Entry
129024964 CDS
T10128
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03460
Fanconi anemia pathway
ppyg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129024964 (FANCL)
09124 Replication and repair
03460 Fanconi anemia pathway
129024964 (FANCL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppyg04121
]
129024964 (FANCL)
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129024964 (FANCL)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129024964 (FANCL)
Ubiquitin system [BR:
ppyg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129024964 (FANCL)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
129024964 (FANCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-rbx1
zf-RING-like
Ca_bind_SSO6904
zf-HC5HC2H
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
129024964
NCBI-ProteinID:
XP_054328306
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All DBs
Position
12:75323584..75399834
Genome browser
AA seq
380 aa
AA seq
DB search
MAVTEASLLRQCPLLLPQNRSKTVYEGFISAQGRDFHLRIVLPEDLQLKNARLLCSWQLR
TILSGYHQIVQQRMQHSPDLMSFMMELKMLLEVALKNRQELYALPPPPQFYSSLIEEIGT
LGWDKLVYADTCFSTIKLKAEDASGREHLITLKLKAKYPAESPDYFVDFPVPFCASWTPQ
VNSPQSSLISIYSQFLAAVESLKAFWDVMDEIDEKTWVLEPEKPPRSATARRIVLGNNVS
INIEVDPRHPTMLPECFFLGADHVVKPLGIRLSRNIHLWDPENSVLQNLKDVLEIDFPAR
AILEKSDFTMDCGICYAYQLDGTIPDQVCDNSQCGQPFHQICLYEWLRGLLTSRQSFNII
FGECPYCSKPITLKMSGRKY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacggaagcgagcctgttgcgccagtgccccctgcttctgccccagaaccgg
tcgaaaaccgtgtatgagggattcatctcggctcagggaagagacttccaccttaggata
gtgttgcctgaagatttacaactgaagaatgcaagattattatgtagttggcagctgaga
acaatacttagtggataccatcaaatagtacaacagagaatgcagcactctcctgatcta
atgagctttatgatggagttgaagatgcttttggaagttgccttaaagaatagacaagag
ttgtatgcactacctcctcctccccagttctactcaagccttattgaagagataggaact
cttggttgggataaacttgtgtatgcagatacctgcttcagtaccatcaagttaaaagca
gaagatgcttctggtagagagcatttaatcactctcaagttgaaggcaaagtatcctgca
gaatcaccagattattttgtggattttcctgttccattttgtgcttcctggacacctcag
gtaaattctcctcagagctccttaataagcatttatagtcagtttttggcagcagtagaa
tcactaaaggcattctgggatgttatggatgaaatcgatgagaagacctgggtacttgag
ccagaaaaacctccacggagtgcaacagcacgcagaattgtattagggaataatgtttcc
ataaatatagaggtagaccccaggcatcctactatgcttcctgagtgcttctttcttgga
gctgaccatgtggtaaaacccctgggaattaggctgagcaggaacatacatttgtgggat
ccagaaaatagtgtgttacaaaatttgaaagatgttttagaaattgattttccagctcgt
gctatcctggaaaaatctgattttactatggattgtggaatttgttatgcttatcaactt
gacggtaccattcctgatcaagtgtgtgataattcccagtgtggacaacctttccatcaa
atatgcttatatgagtggctgagaggactactaactagtagacagagttttaacatcata
tttggtgaatgtccatattgtagtaagccaattaccttaaaaatgtctggaaggaaatac
tga
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