Pongo pygmaeus (Bornean orangutan): 129025213
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Entry
129025213 CDS
T10128
Symbol
GSPT2
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3B
KO
K03267
peptide chain release factor subunit 3
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129025213 (GSPT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129025213 (GSPT2)
03012 Translation factors [BR:
ppyg03012
]
129025213 (GSPT2)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129025213 (GSPT2)
Translation factors [BR:
ppyg03012
]
Eukaryotic type
Release factors
129025213 (GSPT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
DUF5096
Motif
Other DBs
NCBI-GeneID:
129025213
NCBI-ProteinID:
XP_054328827
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All DBs
Position
X:52373730..52376604
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AA seq
628 aa
AA seq
DB search
MDSGSSSSDSAPDCWDQVDMEAPGSAPSGDGVSSAVAEAQREPLSSAFSRQLNVNAKPFV
PNVHAAEFVPSFLRGPSQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVS
LEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMM
EEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYER
EAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIG
GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSI
ERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNL
PNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDT
ETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYN
AVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF
PQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggattcgggcagcagcagcagcgactcggcgcccgattgctgggaccaggtggacatg
gaagccccggggtcggccccgagcggggatggagtctcctctgcggtggccgaggcccag
cgcgagcccctcagctcggccttcagccgtcagctcaacgtcaacgccaagcccttcgtg
cctaacgtacacgccgcggagttcgtgccgtccttcctgcggggcccgagtcagccgccc
accctcccggccggctccggcagcaacgatgaaacctgcaccggcgcgggataccctcaa
ggtaaaaggatgggacggggggcacctgtggaaccttcccgagaggaaccgttagtgtcg
cttgaaggttccaattcagccgttaccatggaactttcagaacctgttgtagaaaatgga
gaggtggaaatggccctagaagaatcatgggagcacagtaaagaagtaagtgaagccgag
cctgggggtggttcctcgggagattcagggcccccagaagaaagtggccaggaaatgatg
gaggaaaaagaggaaataagaaaatccaaatctgtgatcgtaccctcaggtgcacctaag
aaagaacacgtaaatgtagtattcattggccatgtagacgctggcaagtcaaccatcgga
ggacagataatgtttttgactggaatggttgacaaaagaacactggagaaatatgaaaga
gaagctaaggaaaaaaacagagaaacctggtatttgtcctgggccttagatacaaatcag
gaggaacgagacaagggtaaaacagtcgaagtgggtcgtgcctattttgaaacagaaagg
aaacatttcacaattttagatgcccctggccacaagagttttgtcccaaatatgattggt
ggtgcttctcaagctgatttggctgtgctggtcatctctgccaggaaaggagagtttgaa
actggatttgaaaaaggtggacagacaagagaacatgcgatgttggcaaaaacggcaggg
gtgaaacatttaatagtgcttattaataagatggatgatcccacagtaaattggagcatc
gagagatatgaagaatgtaaagaaaaactggtaccctttttgaaaaaagtaggcttcagt
ccaaaaaaggacattcactttatgccctgctcaggactgaccggagcaaatattaaagag
cagtcagatttctgcccttggtacactggattaccatttattccgtatttggataacttg
ccaaacttcaacagatcaattgatggaccaataagactgccaattgtggataagtacaaa
gatatgggcactgtggtcctgggaaagctggaatctgggtccatttttaaaggccagcag
ctcgtgatgatgccaaacaagcacaatgtagaagttcttggaatactttctgatgatact
gaaactgattttgtagccccaggtgaaaacctcaaaatcagactgaagggaattgaagaa
gaagagattcttccaggattcatactttgtgatcctagtaacctctgccattctggacgc
acgtttgatgttcagatagtgattattgagcacaaatccatcatctgcccaggttataat
gcggtgctgcacattcatacttgtattgaggaagttgagataacagccttaatctccttg
gtagacaaaaaatcaggagaaaaaagtaagacacgaccccgcttcgtgaaacaagatcaa
gtatgcattgctcgtttaaggacagcaggaaccatctgcctcgagacgttcaaagatttt
cctcagatgggtcgttttactttaagagatgagggtaagaccattgcaattggaaaagtt
ctgaaactggtcccggagaaggactaa
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