Pongo pygmaeus (Bornean orangutan): 129025833
Help
Entry
129025833 CDS
T10128
Name
(RefSeq) RNA-binding motif protein, Y chromosome, family 1 member F/J-like isoform X1
KO
K25090
RNA-binding motif protein, Y chromosome, family 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyg03041
]
129025833
Spliceosome [BR:
ppyg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129025833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_PARP14_3
Pyr_excise
RRM_7
RRM_occluded
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
129025833
NCBI-ProteinID:
XP_054329376
LinkDB
All DBs
Position
Y:complement(11307677..11321614)
Genome browser
AA seq
497 aa
AA seq
DB search
MVEADHPGKLFIGGLNRETNEKMLKSVFGKHGPISEVLLIKDRTSKSRGFAFITFENPAD
AKNAAKDMNGKSLDGKAIKVEQAKKPSFRSGGRRRPPASSRNRRLSGSLRSARGSSGGTR
GWLPSPEGHLDDGGYTPDLKMSYSRGLIPVKRGPSSRSGSPPPKKSAPSAVARSNSWMGN
RGPVSRRRENYGVPPCRVTVSSWRNDHMSPRDDGYATKDRNHPGSREIRVYAPPSRGYAY
RDYAHSSRDEHSSRGYRNYPSSRETRDYASPSRGYAYRDYGHSSPDEHSSRGYRNHPSSR
ETRDYAPPSRGYAYRDYGHSSRDEHSSRGYRNHPSSRETRDYAPPPRDYAYCDYAHSSWD
EYSSRGYSYRDGYGEARGRDHSEHLSGSSYRDAFQRYGTSHGAPPARGPWISYGGSTCHD
YNNTGDRCGRSLESYSRSCGDFYYCDREHVCRQDQRNPPSLGRVLPAPREAYGSSSYVAS
TVDGGESRSEKGDRSRY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagcagatcatcctggcaagctcttcattggtggcctcaatagagaaaccaat
gagaagatgcttaaatcagtatttgggaagcatggtcccatatcagaagttcttttgata
aaggatcgaaccagcaaatccagaggctttgcatttattacttttgagaaccctgcagat
gctaagaatgctgccaaagatatgaatggaaagtctttggatggaaaagcaataaaagta
gaacaagccaagaaaccatcttttcgaagtggtggtaggcggagaccaccagcttcctca
agaaacagaagactttcaggaagtctgagatctgcaagaggaagtagtggaggaacaaga
gggtggcttccctcacctgaaggacacttggatgatggtggatacacccctgatctcaag
atgagttattctaggggactcattccagtgaaaagaggtccctcttcaagaagtggaagt
cctcctcctaaaaaatctgctccttctgctgtggcaagaagcaatagttggatgggaaac
cgaggtcctgtatcacgaagaagagagaattatggagttcctccgtgcagagtgacagtc
tcttcatggagaaatgatcatatgtcaccaagagatgatggttatgcaactaaggataga
aatcatccaggttctcgagaaattagggtttatgctccaccatctagaggctatgcatac
cgtgattatgctcattctagtcgggacgaacattcctctagaggatatagaaattatcca
agttcccgagaaactagggattatgcttcaccatctagaggctatgcataccgtgattat
ggtcattctagtccggatgaacattcctctagaggatatagaaatcatccaagttcccga
gaaactagggattatgctccaccatctagaggctatgcataccgtgattatggtcattcg
agtcgggatgaacattcctctagaggatatagaaatcatccaagttcccgagaaaccagg
gattatgctcccccacctagagactatgcatactgtgattatgctcattctagttgggat
gaatattcctctagaggatatagttatcgtgatggctacggcgaggcccgtggtagagat
cattctgaacatctaagtggaagttcttatagagatgcatttcagagatatgggacctct
catggtgcaccacctgcacgagggccttggatatcttatggtggaagcacctgccatgat
tataataatacaggagatagatgtggcagaagtctggagagttactcaaggagctgtggt
gatttttattattgtgatcgtgagcatgtttgcagacaagaccaaaggaatccgccttct
ctgggtagggtgctccctgctcctcgtgaagcatatggtagctcaagttatgtggcatct
acagtagatggtggggaaagtcgatctgaaaaaggagaccgaagcagatattaa
DBGET
integrated database retrieval system
