Pongo pygmaeus (Bornean orangutan): 129027798
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Entry
129027798 CDS
T10128
Symbol
SEMA6C
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
129027798 (SEMA6C)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
129027798
NCBI-ProteinID:
XP_054329955
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Position
1:99313085..99327921
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AA seq
932 aa
AA seq
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MPRAPHFMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDAVAAELG
LDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
CYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAV
FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFF
REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
SEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPATHQPLLTLTSR
ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLPPGWRSGGPEPILLEEIDAYSPARCS
GKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSQCARHGACQRSCLASQDPYCGWH
SSRGCVDIRGPGGTDVDQAGNQESMEHSDCQDGATGSQSGPGDSAYGVRRDLPPASASRS
VPIPLLLASVAAAFALGASVSGLLVSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGG
GLEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPESTPELPVKHLRAAGDPWE
WNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPP
RKGAEPPAPLTSRALPPEPAPALLGGPSPRPRPHECAPPLRLDVPPEGRCASAPARPALS
APAPRLGVGGGRRLPFSGHRAPPALLTRVPSGGPSRYSGGPGRHLLYLGRPEGYRGRALK
RVDVEKPQLSPKPPLVGPSSRQAVPNCGRFNF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgccccccacttcatgcccttgctgctactgctgctgctgctctcacttccc
catactcaggccgcctttccccaggaccccctccctctgttgatctctgaccttcaaggt
acttccccattatcctggtttcggggcctggaggatgatgctgtggctgcagaacttggg
ctggactttcagagattcctgaccttgaaccggaccttgctagtggctgcccgggatcac
gttttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccaacaagtat
ctaacatggagaagccaagatgtggagaactgtgctgtacggggaaagctgacggacgag
tgctacaactatattcgtgttcttgttccctgggactcccagacgctccttgcctgtgga
acgaactcattcagccctgtgtgccgcagctatgggataacttcgctgcagcaggagggt
gaggaactgagtgggcaggctcgatgcccctttgatgccacccagtccaacgtggccgtc
tttgcagagggcagcctgtactcagccacagctgcggatttccaggccagtgatgctgta
gtttacagaagccttgggccccagcccccactccgctcggccaagtacgactccaagtgg
ctccgagagccacactttgtccatgccttggagcatggagaccacgtctacttcttcttc
cgcgaggtctctgtggaggatgctcggctgggaagggtgcagttctcccgcgtagcccga
gtatgtaaacgtgacatgggcggctcgcctcgggccttggaccgccactggacatccttc
ctgaagctgcggctcaactgctctgtccctggggactctactttctattttgatgtttta
caggccttgactgggcctgtgaacctgcatggccgctctgctctctttggggtcttcacc
acccagaccaatagcatccctggctctgccgtctgcgccttctacctggatgagattgag
cgtgggtttgagggcaagttcaaggaacagaggagtctggatggggcctggactcctgtg
tctgaggacagagtcccctcacccaggccaggatcctgtgcaggagtagggggagctgcc
ttgttctcctcttctcgagacctccctgatgatgtcctgaccttcatcaaggctcacccg
ctgctggaccccgctgtaccacctgccacccatcagcctctactcactctcactagcagg
gccctactgacccaagtagctgtggatggcatggctggtccccacagtaacatcacagtc
atgttccttggctccaatgatgggacagtgctgaaggtgctgcccccaggttggcgatcc
gggggacctgagcccatcctcctggaagagattgatgcctacagccctgcccggtgcagt
gggaagcggacagcccaaacagcacgacggatcatagggctggagctggacactgagggc
cacaggctctttgtggctttttctggctgtattgtctacctccctctcagccagtgtgcc
cggcatggggcctgtcagaggagctgtttggcttctcaggacccatactgtggatggcat
agctccaggggctgtgtggatatcaggggacctggtgggactgatgtggatcaggctggg
aaccaggaatccatggagcatagtgactgccaagacggagctactgggagtcagtctggc
cctggggattctgcttatggcgtgcgccgggacctgcccccagcctcggcctcccgctcc
gtccccatcccactcctcctggccagtgtggccgcagcttttgccctgggcgcctcagtc
tctggcctcctggtctcctgtgcttgtcgccgcgcccaccgacgtcggggcaaggacatc
gagactccggggctcccgcgccctctctccctccgcagtttggcccggctccacggtggg
ggcctagagcccccgccgccctccaaggacggggacgcggtgcagacgccgcagctctac
accaccttcctgccgcctccggagggcgtgcccccgccggagctcgcctgcctgcccacc
cccgaatccacgccggagctgccggtcaagcacctccgcgccgccggggacccctgggag
tggaaccagaacaggaacaacgccaaggagggcccgggccgctcacggggcgggcacgcg
gcgggcggacccgcgccccgcgtgctggtgaggccgccgccgcccggctgtcccgggcag
gccgtggaagtcaccaccctggaggaactgctgcgctacctgcacggcccgcagccgccc
agaaagggggccgaaccccccgcccctttaacctcgcgggcgctcccgccggagcccgcc
cctgccctcttgggcggccccagccccaggcccaggccccacgagtgcgccccgccgctg
aggctggacgtgccccccgagggcaggtgcgcctctgcccccgcccggcccgcgctctcc
gcccctgctccccggctgggcgtcggcggaggccggaggttgcctttctccggccaccgg
gccccccctgccctgctcactcgagtcccctcgggaggtccctccaggtactccgggggt
cccgggaggcacctcctgtacctgggccggcccgagggctaccggggccgcgccctgaaa
agggtggacgtcgagaagccccagttgtccccgaagcctcccctcgtcgggccctcctcc
cgccaggccgtcccgaactgcggccgtttcaacttttaa
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