Pongo pygmaeus (Bornean orangutan): 129028448
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Entry
129028448 CDS
T10128
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03013
Nucleocytoplasmic transport
ppyg03250
Viral life cycle - HIV-1
ppyg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129028448
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129028448
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129028448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129028448
03110 Chaperones and folding catalysts [BR:
ppyg03110
]
129028448
04121 Ubiquitin system [BR:
ppyg04121
]
129028448
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129028448
Chaperones and folding catalysts [BR:
ppyg03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
129028448
Ubiquitin system [BR:
ppyg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129028448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
LIM
Zn_ribbon_RanBP
TPR_1
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_7
TPR_11
DUF7571
Motif
Other DBs
NCBI-GeneID:
129028448
NCBI-ProteinID:
XP_054330222
LinkDB
All DBs
Position
12:complement(38801434..38922996)
Genome browser
AA seq
2354 aa
AA seq
DB search
MLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNC
EKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPC
HDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHY
NQLFGDVCFHCNRVLEGDDKGLTLMPRMECSGAITVHCNLELLDSRDPPASTSQSAGATG
LSHCARRSLPLSAVEAGGRNLIRACQDTLRDQGAAKSPAECSSSADVASVTHSADQYASA
SEWSPPATPLRHWLAGAFLLEVATAAGLSAGLRRLRSQVGSAMRRSKADVERYIASVQGS
APSPREKSMKGLYFAKLYYEAKEYDLAKKYICTYGQERDPKAHRFLGLLYELEENTDKAV
ECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD
CEGEDGWNKLFNLIQSELYVRPDDVHVNIRLVELYRSNKRLKDAVAHCREAERNTALRSS
LEWNSCVVQTLKEYLESLQCLESDKSDWRATNTDLLLAYANLMLLTLSTRDVQESRELLE
SFGSALQSVKSSLGGNDELSATFLEMKGHFYMHAGSLLLKMGQHSNVQWRALSELAALCY
LIAFQVPRPKIKLIKGEAGQNLLGMLACDRLSQSGHMLLNLSHGKQDFLKEVVESFANKS
GQSALYDALFSSQLPKDTSFLGSDDIGNIDVQEPELEDLARYDVGAIRAHNGSLQHLTWL
GLQWNSLPALPGIRKWLKQLFHHLPQETSRLETNAPESICILDLEVFLLGVVYTSHLQLK
GKCNSHHSSYQPLCLPLPVCEQLCTERQKSWWDAVCTLIHRKAVRGNAAKLRLLVQHEIN
TLRAQEKHGLQPALLVHWAKCLQKMGSALNSFYDQREYIGRSVHYWKKVLPLLKIIKKNS
IPEPIDPLFKHFHSVDIQASEIVEYEEDAHITFAILDAVNGNIEDAMTAFESIKSVVSYW
NLALIFHRKAEDIENDALSPEEQEECKNYLRKTRDYLIKILDDSDSNLSVVKKLPVPLES
VKEMLNSVMQELEDYREGGPLYKNGSLRNADSEIKHSTPSLTKYSLSPSKSYKYSPKTPP
RWAEDQNSLLKLICQQVEAIKKEMQELKLNSSNSASLHRWPTENYGPDSVPDGYQGSQTF
HGAPLTAATSGPSVCYSQSPAYNSRYLLRPAANVTPTKGPVYGMNRLPPQQHIYAYPQQM
HTLPVQSSAACMFSQEMYGPPALRFESPATGILSPRGDDSFNYNVQQTSTNPPLPEPGYF
TKPPIAAHASRSAESKAIEFGKTNFVQPMPGEGIRPSLPTPAHTTQPAPFKFNSNFKSND
GDFTFSSPQVVTQPPPAAYSNSESLLGLLTSDKPLQGDGYSGPKPIPGGQTIGPRNTFNF
GSKNVSGISFAENMGSSQQKNSGFRRSDDMFTFHGPGKSVFGTPTLETANKNQETDGGSA
HGDDDDDGPHFEPVVPLPDKAEVKTGEEDEEEFFCNRAKLFRFDVESKGWKERGIGNVKI
LRHETSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQL
AIRFKTPEEAALFKCKFEEAQSILKAPGTNVATASNQAVRIVKEPTSHDNKISKAPKRGF
EGMFIRKGQWDCSVCCVQNESSFLKCVACDASKPTYKPIAEAPSAFTLGSEMKLHDSSGS
QVGTGFKSNFSEKAFKFGNTEQGFKFGHVDQENSPSCMFQGSSNTEFKSTKEGFSIPVSA
DGFKFGISEPGNQEKKSEQPLENDTGFQAQDISSQKNGRVVIVGQTSSTFTFADLAKSTS
GEGFQFGKKEPNFKGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDAYKTEDSDDIHFEP
VVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLM
RREQVLKVCANHWITTTMNLKPLSGSDRAWIWLAIDFSGGDAKLEQLAAKFKTPELAEEF
KQRFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKEIKTFLTNDQTKVTEEE
DKSSDTDAASASDTTIKPNPENTGPTLEWDDYDLREDALDDSVSSSSVHASALAGSPVRK
NLFRSGESTTGFNLSLKSALSPSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP
LPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRD
QVLKLCANHRITPDMTLQNMKGTERVWVWTACDFADGERKVEHLAVCFKLQDVADSFKKI
FEGGGGRDSIGRYT
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgctctttgccccttgctgtcatcagtgtggtgaattcatcattggccgagttatcaaa
gccatgaataacagctggcatcccgagtgcttccgctgtgacctctgccaggaagttctg
gcagatatcgggtttgtcaagaatgctgggagacacctgtgtcgcccctgtcataattgt
gagaaagccagaggccttgggaaatacatctgccagaaatgccatgctatcatcgatgag
cagcctctgatattcaagaatgacccctaccatccagaccatttcaactgcgccaactgc
gggaaggagctgactgccgatgcacgggagctgaaaggggagctatactgcctgccatgc
catgataaaatgggggtccccatctgtggcgcttgccgacggcccatcgaagggcgcgtg
gtgaacgccatgggcaagcagtggcatgtggagcattttgtttgtgccaagtgtgagaaa
ccctttctcggacatcgccattatgagaggaaaggcctggcgtattgtgaaactcactat
aaccagctatttggtgatgtttgtttccactgcaatcgtgttctagaaggtgatgacaag
ggtctcactctgatgcccaggatggaatgtagtggtgctatcacagttcattgtaacctg
gaactcctggactcgagggatcctcccgcctccacctcccaaagtgctggggctaccggc
ttgagccactgtgccagacggagtctccctctgtcagctgtggaggctggcggccgaaat
ctgatccgggcttgccaagacaccctcagagaccagggcgctgccaagagcccggcggag
tgcagctcgagcgccgacgtcgccagtgtgacgcacagtgctgaccagtacgcaagtgcg
tcagaatggtctccaccggctacgccgctgcgtcactggcttgcaggcgctttcctcttg
gaagtggcgactgctgcagggctgagcgctggtctcaggaggctccgcagtcaggttggc
agcgcgatgaggcgcagcaaggccgacgtggagcggtatatcgcctccgtgcagggctcc
gccccgtcgcctagagagaagtcaatgaaaggattgtattttgcaaagctgtattatgaa
gctaaagaatatgatcttgctaaaaaatacatatgtacttatgggcaagagagggatccc
aaagctcatagatttctgggtcttctttatgaattggaagaaaacacagacaaagccgtt
gaatgttacaggcgttcagtggaattaaacccaacacaaaaagatcttgtgttgaagatt
gcagaattgctttgtaaaaatgatgttactgatggtagagcaaaatactgggttgaaaga
gcagctaaacttttcccaggaagtcctgcagtttataaactaaaggaacagcttctagat
tgtgaaggtgaagatggatggaataaactttttaacttgattcagtcagaactttatgta
agacctgatgacgtccatgtgaatatccggctagtggagttgtatcgctcaaataaaaga
ttgaaggatgctgtggcccactgccgtgaggcagagaggaacacagctttgcgttcaagt
ttagaatggaattcgtgtgttgtacagacccttaaggaatatctggagtctttacagtgt
ttggagtctgataaaagtgactggcgagcaaccaatacagacttactgctggcctatgct
aatcttatgcttcttacactttccactagagatgtgcaggaaagtagagaattactggaa
agttttggtagtgctcttcagtctgtgaaatcttctttgggtggaaatgatgaactgtca
gctactttcttagaaatgaaaggacatttctacatgcatgctggttctctgcttttgaag
atgggtcagcatagtaacgttcaatggcgagctctttctgagctggctgcattgtgctat
ctcatagcatttcaggttccaagaccaaagattaaattaataaaaggtgaagctggacaa
aatctgctgggaatgttggcctgtgaccgactgagccaatcagggcacatgttgctaaac
ttaagtcatggcaagcaagattttttaaaagaggttgttgaatcttttgccaacaaaagc
gggcagtctgcattatatgatgctctgttttctagtcagttacctaaggatacatctttt
cttggtagcgatgatattggaaacattgatgtacaagaaccagagcttgaagatttggct
agatatgatgttggtgctattcgagcacataatggtagtcttcagcaccttacttggctt
ggcttacagtggaattcattgcctgctttacctggaatccgaaaatggctaaaacagctt
ttccatcatttgccccaggaaacctcaaggcttgaaacaaatgcacctgaatcaatatgt
attttagaccttgaagtatttctccttggagtagtatataccagccacttacaattaaag
gggaaatgtaattctcaccacagctcctatcagccattatgcctgccccttcctgtgtgt
gaacagctttgtacagaaagacaaaaatcttggtgggatgcggtttgtactctgattcac
agaaaagcagtacgtggaaacgcagcaaaattgagacttttagttcagcatgaaataaac
actctaagagcccaggaaaaacatggccttcaacctgctctgcttgtacattgggcaaaa
tgccttcagaaaatgggcagcgctcttaattctttttatgatcaacgagaatacataggg
agaagtgttcattattggaagaaagttttgccattgttgaagataataaaaaagaacagt
attcctgaacctattgatcctctgtttaaacattttcatagtgtagacattcaggcatca
gaaattgttgaatatgaagaagacgcacacataacttttgctatattggatgcagtaaat
ggaaatatagaagatgctatgactgcttttgaatctataaaaagcgttgtttcttattgg
aatcttgcactgatttttcacaggaaggcagaagacattgaaaatgatgccctgtctcct
gaagaacaagaagaatgcaaaaattatctgagaaagaccagggactacctaataaagatt
ttagatgacagtgattcaaatctttcagtggtcaagaaattgcctgtgcccctggagtct
gtaaaagagatgcttaattcagtcatgcaggaactcgaagactatagggaaggaggtcct
ctttataaaaatggttctttgcgaaatgcagattcagaaataaaacattctacaccatct
cttaccaaatattcactatcaccaagtaaaagttacaagtattctcccaaaacaccacct
cgatgggcagaagatcagaattctttactgaaactgatttgccaacaagtagaggccatt
aagaaagaaatgcaggagttgaaactaaatagcagtaactcagcatcccttcatcgttgg
cccacagagaattatggaccagactcagtgcctgatggatatcaggggtcacagacattt
catggggctccactaacagctgcaactagtggcccttcagtatgttatagtcagtcacca
gcttataattcccggtatcttctcagaccggcagctaatgttactcccacaaagggccca
gtctatggcatgaatagacttccaccccaacagcatatttatgcctatccgcaacagatg
cacacactgccagtgcaaagctcagctgcttgtatgttctctcaggagatgtatggtcct
cctgcattgcgttttgagtctcctgcaacaggaattctatcgcccaggggtgatgattcc
tttaattacaatgttcaacagacaagcacaaatccacctttgccagaaccaggatatttc
acaaaacctccaattgcagctcatgcttcaagatctgcagaatctaaggctatagaattt
gggaaaactaattttgttcagcccatgccgggtgaaggaataaggccatctttgccaaca
ccagcacacacaacacagccagctccttttaaatttaactcaaatttcaaatcaaatgat
ggtgacttcacattttcctcaccacaagttgtgacacagccccctcctgcagcttacagt
aacagtgaaagccttttaggtctcctgacttcagataaacccttgcaaggagatggctat
agtggacccaaaccaattcctggtggtcaaaccattgggcctcgaaatacattcaatttt
ggaagcaaaaatgtgtctggaatttcatttgcagaaaacatggggtcgagtcagcaaaag
aattctggttttcggcgaagtgatgatatgtttactttccatggtccagggaaatcagta
tttggaacacccactttagagacagcaaacaagaatcaggagacagatggaggaagtgcc
catggggatgatgatgatgacggtcctcactttgagcctgtagtacctcttccggataag
gctgaagtaaaaactggtgaggaagatgaagaagaattcttttgcaaccgcgcgaaattg
tttcgttttgatgtagaatccaaaggatggaaagaacgtgggattggcaatgtaaaaata
ctgaggcatgaaacatctggtaaaattcgccttctaatgagacgagagcaagtattgaaa
atctgtgcaaatcattacatcagtccagatatgaaattgacaccaaatgctggatcagac
agatcttttgtatggcatgcccttgattatgcagatgagttgccaaaaccagaacaactt
gctattaggttcaaaactcctgaggaagcagcactttttaagtgcaagtttgaagaagcc
cagagcattttaaaagccccaggaacaaatgtagccacagcatcaaatcaggctgtcaga
attgtaaaagaacccacaagtcatgataacaagataagcaaggctccaaagaggggattt
gaaggaatgttcatcaggaaaggacaatgggactgtagtgtttgctgtgtacaaaatgag
agttctttcttaaaatgtgtggcttgtgatgcctctaaaccaacttataaacctattgca
gaagctccttcagctttcacattgggctcagaaatgaagttgcatgactcttctggaagt
caggtgggaacaggatttaaaagtaatttctcagaaaaagcttttaagtttggcaataca
gagcaaggattcaaatttgggcatgtggatcaagaaaattcaccttcatgtatgtttcag
ggttcttctaatacagaatttaagtcaaccaaagaaggattttccatccctgtgtctgct
gatggatttaagtttggcatttcggaaccaggaaatcaagaaaagaaaagtgaacagcct
cttgaaaatgatactggcttccaggctcaggatattagtagccagaagaatggtcgtgtt
gtgattgttggccaaacaagtagcacgtttacatttgcagatcttgcaaaatcaacttcc
ggagaaggatttcagtttggcaaaaaagagcccaatttcaagggattttcaggtgctgga
gaaaaattattctcatcacaatgcggtaaaatggccaataaagcaaacacttctggtgat
tttgagaaagatgatgatgcctataagactgaggacagcgatgacatccattttgaacca
gtagttcaaatgcctgaaaaagtagaacttgtaacaggagaagaagatgaaaaagttctg
tattcacagcgggtaaaactatttagatttgatgctgagataagtcagtggaaagaaagg
ggcttggggaacttaaaaattctcaaaaatgaggtcaatggcaaactaagaatgctgatg
cgaagagaacaagtactaaaagtgtgtgctaatcattggataacgactacaatgaacctg
aagcctctctctggatcagatagagcatggatctggttagccattgatttctctggtggt
gatgccaaactagagcagttggcagcaaaatttaaaacaccagagttggctgaagaattc
aagcagagatttgaggaatgccagcggcttctgttagacataccacttcaaactccccat
aaacttgtagatactggcagagctgccaagttaatacagagagctgaagaaatgaagagt
ggactgaaagagatcaaaacatttttgacaaatgatcaaacaaaagtcactgaggaagag
gataagagttcagatacagatgcagccagtgcctcagacacaacaataaaacccaatcct
gaaaacactgggcccacattagaatgggatgactacgatttaagggaagatgctttggat
gatagtgttagtagtagctcagtacatgcttctgcattggcaggtagccctgtgagaaaa
aatcttttccgctctggtgagtcaacaacaggatttaacttgagtttgaaatctgctttg
agtccatctaagtctcctgccaagttgaatcagagtgggacttcagttggcactgatgaa
gaatctgatgttactcaagaagaagagagagatggacagtactttgaacctgttgttcct
ttacctgatctagttgaagtatccagtggtgaggaaaatgaacaagttgtttttagtcac
agggcaaaactctacagatatgataaagatgttggtcaatggaaagaaaggggcattggt
gatataaagattttacagaattatgataataagcaagttcgtatagtgatgagaagggac
caagtattaaaactttgtgccaatcacagaataactccagacatgactttgcaaaacatg
aaaggaacagaaagagtatgggtgtggactgcatgtgattttgcagatggagaaagaaaa
gtagagcatttagctgtttgttttaaactacaggatgttgcagactcgtttaagaaaatt
tttgaggggggaggggggagggatagcattgggagatatacgtaa
DBGET
integrated database retrieval system
