Pongo pygmaeus (Bornean orangutan): 129030250
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Entry
129030250 CDS
T10128
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129030250 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyg03041
]
129030250 (USP39)
Spliceosome [BR:
ppyg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
129030250 (USP39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
129030250
NCBI-ProteinID:
XP_054331363
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All DBs
Position
12:complement(47614262..47658823)
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AA seq
565 aa
AA seq
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MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREVEPASAR
EAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtctaagcgggagtctcgcggttccacccgcgggaagcgagagtccgag
tcacggggcagctccggtcgcgtcaagcgggagcgagatcgggagcgggagcctgaggcg
gcgagctcccggggcagccctgtgcgcgtgaagcgggaggtcgagccagcgagcgcgcgc
gaggccccggcttctgttgtcccgtttgtgcgggtgaagcgggagcgcgaggtcgatgag
gactcggagcctgagcgggaggtgcgagcaaagaatggccgagtggattctgaggaccgg
aggagccgccactgcccatacctggacaccattaacaggagtgtgctggacttcgacttt
gagaaactgtgttctatctccctctcacacatcaatgcttacgcctgtctggtgtgtggc
aagtactttcaaggccgaggtttgaagtctcacgcctacattcacagtgtccagtttagc
caccatgttttcctcaacctccacaccctcaagttttactgccttccagacaactatgag
atcattgattcctcattggaggatatcacgtatgtgttgaagcccactttcacaaagcag
caaattgcaaacttggacaagcaagccaaattgtcccgggcatatgatggtaccacttac
ctgccgggtatcgtgggactgaataacataaaggccaatgattatgccaacgctgtcctt
caggctctatctaatgttcctcctctccggaactactttctggaagaagacaattataag
aacatcaaacgtcctccaggggatatcatgttcttgttggtccagcgttttggagagctg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtgtctccccatgagatgctt
caggcggttgtactttgcagtaagaagacttttcagatcaccaaacaaggggatggagtc
gactttctgtcttggtttctgaatgctctgcactcagctctggggggcacaaagaagaaa
aagaagactattgtgactgatgttttccaggggtccatgaggatcttcactaaaaagctt
ccccatcctgatctgccagcagaagaaaaagagcagttgctccataatgacgagtaccag
gagacgatggtggagtccacttttatgtacctgacgctggaccttcctactgcccccctc
tacaaggacgagaaggagcagctcatcattccccaagtgccactcttcaacatcctggcc
aagttcaatggcatcactgagaaggaatataagacttacaaggagaactttctgaagcgc
ttccagcttaccaagctgcctccatatctaatcttttgtatcaagagattcactaagaac
aacttctttgttgagaagaatccaactattgtcaatttccctattacaaatgtggatctg
agagaatacttgtctgaagaagtacaagcagtacacaagaataccacctatgacctcatt
gccaacatcgtgcatgacggcaagccctccgagggctcctaccggatccacgtgcttcat
catgggacaggcaaatggtatgaattacaagacctccaggtgactgacatccttccccag
atgatcacgctgtcagaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcagggggcttga
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