Pongo pygmaeus (Bornean orangutan): 129031252
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Entry
129031252 CDS
T10128
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyg03041
]
129031252 (DDX18)
03009 Ribosome biogenesis [BR:
ppyg03009
]
129031252 (DDX18)
Enzymes [BR:
ppyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129031252 (DDX18)
Spliceosome [BR:
ppyg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129031252 (DDX18)
Ribosome biogenesis [BR:
ppyg03009
]
Eukaryotic type
90S particles
Helicases
129031252 (DDX18)
Pre-60S particles
129031252 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
129031252
NCBI-ProteinID:
XP_054333293
LinkDB
All DBs
Position
11:complement(27342653..27360445)
Genome browser
AA seq
670 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASNLTLSETQNGDVSEETMGSRKVKKSKQKP
MNVGLSETQNGDMSQEAVENIKVKKSPQKSTVLTNGEAAMQSPNSESKKKKKKKRKMVND
AEPDTKKAKTENKGQPEEESAETPKETENNVEKPDNDEDESEVPSLPLGLTGAFEDTSFA
SLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVEL
IVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLAN
GINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQT
MLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFL
KKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLL
CTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRY
LKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFN
VNNLNLSQVALSFGFKVPPFVDLNINSNEGKQKKRGGGGGFGYQKTKKVEKSKIFKHISK
KSSDSRQFSH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacctgccgatgaaactcctgcgtaagaagatcgagaagcggaacctcaaattg
cggcagcggaacctaaagttgcagggggcctcaaatctgaccctatcagaaactcaaaat
ggagatgtatctgaagaaacaatgggaagtagaaaggttaaaaaatcaaaacaaaagccc
atgaatgtgggcttatcagaaactcaaaatggagacatgtctcaagaagcagtagaaaat
ataaaagttaaaaaatctccccagaaatccactgtattaaccaatggagaagcagcaatg
cagtctcccaattcagaatcaaaaaagaaaaagaagaaaaagagaaaaatggtgaatgat
gctgagcctgatacaaaaaaagcaaaaactgaaaacaaagggcaacctgaagaagaaagt
gccgagactcctaaagaaacagagaataatgtggagaagccagataatgatgaagatgag
agtgaggtgcccagcctgcccctgggactgacaggagcttttgaggatacttcgtttgct
tctctatgtaatcttgtcaatgaaaacaccctgaaggcaataaaagaaatgggttttaca
aacatgactgaaattcagcataaaagtatcagaccgcttctggaaggcagggatcttcta
gcagctgcaaaaacaggcagtggtaaaaccctggcttttctcatccctgcggttgaactc
attgttaagttaaggttcatgcccaggaatggaacaggagtccttattctctcacctact
agagaactagccatgcaaacttttggtgttcttaaggagctaatgactcaccacgtgcat
acctatggcttgataatgggtggcagtaacagatctgctgaagcacagaaacttgctaat
gggatcaacatcattgtggccacaccaggccgtctgctggaccatatgcagaatacccca
ggatttatgtataaaaacctgcagtgtctggttattgatgaagctgatcgtatcttggat
gtggggtttgaagaggaattaaagcaaattattaaacttttgccaacacgtagacagact
atgctcttttctgccacccaaactcgaaaagttgaagacctggcaaggatttctctgaaa
aaggagccattgtatgttggtgtcgatgatgataaagctaatgcaacagtggatggtctt
gagcagggatatgttgtttgtccttctgaaaagagattccttctgctctttacattcctt
aagaagaaccgaaagaagaagcttatggtcttcttttcatcttgtatgtctgtgaaatac
cactatgagttgctgaactacattgatttgcccgtcttggccattcatggaaagcaaaag
caaaataagcgtacaaccacattcttccagttctgcaatgcagattcgggaacactgttg
tgtacagatgtggcagcaagaggactggacattcctgaagtcgactggattgttcagtat
gaccctccggatgaccctaaggaatatattcatcgtgtgggtagaacagccagaggccta
aatggaagagggcatgccttgctcattttgcgcccagaagaattgggttttcttcgctac
ttgaaacaatccaaggttccattaagtgaatttgacttttcctggtctaaaatttctgac
attcagtctcagcttgagaaattgattgaaaagaattactttcttcataagtcagcccag
gaagcatataagtcatacatacgagcctatgattcccattctctgaaacagatctttaat
gttaataacttaaatttgtctcaagttgctctgtcatttggcttcaaggtgcctcccttc
gttgatctgaacatcaacagcaatgaaggcaagcagaaaaagcgaggaggtggtggtgga
tttggctaccagaaaaccaagaaagttgagaagtccaaaatctttaaacacattagcaag
aaatcatccgacagcaggcagttctctcactga
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