Pongo pygmaeus (Bornean orangutan): 129031397
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Entry
129031397 CDS
T10128
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129031397 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppyg04121
]
129031397 (TRIP12)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129031397 (TRIP12)
Ubiquitin system [BR:
ppyg04121
]
Ubiquitin ligases (E3)
HECT type E3
129031397 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
129031397
NCBI-ProteinID:
XP_054333639
LinkDB
All DBs
Position
11:complement(130371713..130528206)
Genome browser
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPKALQHTESPSETNKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKS
GATGGSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQEAVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANSNTSGYSESKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTTSVSSGTATAATHAAADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEP
ARTAGGSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREI
RLKRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
TGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtgatagttccacaaccagaggatccagacagagccaatacttcagaaagacaa
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaagcgcagtgctagtcca
gactacaacaggaccaattctcctagctctgcaaaaaaaccaaaagcacttcagcatact
gaatctccctcagaaacaaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaatcaccatcaacaagcaaggctcataccagaaagagt
ggggccactggcggttcacggagtcagaaaagaaaaaggacagagagttcttgtgtaaag
agtggctccgggtctgaatcaactggtgcagaagagagatctgcaaaacctaccaagctg
gcttcaaaatcagccacctcagccaaagctgggtgtagcaccatcactgattcttcttct
gctgcctctacttcctcctcgtcttctgctgtagcctcggcctcctccactgtaccacca
ggtgccagagtgaaacaaggaaaagatcagaacaaggccaggcgttcccgttcagcatcc
agtcccagccccagaagaagcagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgtttcagccctaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaagaaaatctacgaagaaacgcagtgagtctccacctgctgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgtcgacaggagaaaatggcagac
cctgaaagcaaccaggaggcagtaaattcttcagctgctcggacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagt
gaatcagatgattctgagatgggacgtttgcaagctttgttagaggcaaggggtcttccc
cctcacctatttggtcctcttggtcctcggatgtcacagcttttccatagaacaattgga
agtggagctagttctaaggcccagcagctactacaaggattgcaagccagtgatgaaagt
caacagcttcaggcagttattgagatgtgtcagttactggtcatgggaaatgaggagaca
ctgggagggtttcctgtcaagagtgttgttccagctttgattacgttacttcagatggag
cacaattttgatattatgaaccatgcttgtcgagccttaacatacatgatggaagcactt
cctcgatcttctgctgttgtagtagatgctattcctgtctttttagaaaagctgcaagtt
attcagtgtattgatgtggcagaacaggccttgactgccttggagatgttgtcacggaga
cacagtaaagccattctacaggcgggtggtttggcagactgcttgctgtacctagaattc
ttcagcataaatgcccaaagaaatgcattagcaattgcagccaattgctgccagagtatc
acgccagatgaatttcattttgtggcagattccctcccattgctaacccaaaggctaaca
catcaggataaaaagtcagtagaaagcacttgcctttgttttgcacgcctagtggacaac
ttccagcatgaggagaatttactccagcaggttgcttccaaagatctgcttacaaatgtt
caacagctgttggtagtgactccacccattttaagttctgggatgtttataatggtggtt
cgcatgttttctctgatgtgttccaactgtccaactttagctgttcaacttatgaaacaa
aacattgcagaaacacttcactttctcctgtgtggtgcctccaatggaagttgtcaggaa
cagattgatcttgttccacgaagccctcaagaactgtatgaactgacatctctgatttgt
gaacttatgccatgtttaccaaaagaaggcatttttgcagttgataccatgttgaagaag
ggaaatgcacagaacacagatggtgcgatatggcagtggcgtgatgatcggggcctctgg
catccatataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatagtaacactagtggatattcagagtcaaagaaggatgatgctcgagcacagcttatg
aaagaggatccggaactggctaagtcttttattaagacattatttggtgttctttatgaa
gtgtatagttcctcagcaggacctgcggtcagacataagtgccttagagcaattcttagg
ataatttattttgcggatgccgaacttctgaaggatgttctgaaaaatcatgctgtttca
agtcacattgcttccatgctgtcaagccaagacctgaagatagtagtgggagcgcttcag
atggcagaaatcttaatgcagaagttacctgatatttttagtgtttacttcagaagagaa
ggtgtaatgcatcaagtaaaacacttagcagaatcagagtctttgttgacaagcccacca
aaggcgtgtacgaatgggtcaggatccttgggatccacaacttcagtcagcagtgggaca
gccacagctgccactcatgctgcagctgacttgggatcacccagcttgcagcacagcagg
gatgattctttagatctcagccctcaaggtcgattaagtgatgttctaaagagaaaacga
ctgccaaaacgagggccaagaaggccaaagtactcacctccaagagatgatgacaaagta
gacaatcaagctaaaagccccaccactactcagtcacctaaatcttctttcctggcaagc
ttgaatccaaaaacatggggaaggttaagtacacagtccaacagcaacaacattgagcca
gcacggactgcgggaggtagtggccttgccagggctgcctcaaaggataccatctccaat
aacagagaaaaaattaaaggttggattaaggagcaggcacataaatttgtagaacgttat
ttcagttctgagaatatggatggaagcaaccctgcattgaatgtccttcagagactttgt
gctgcaactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcagagtcagatgtttcatcatttgaaatccaacatagtggatttgtg
aagcagctgttgctttatttgacatctaaaagtgaaaaggatgctgtgagcagagagatc
agattaaagagatttcttcatgtatttttttcttctccacttcctggagaagagcccatt
ggaagagtggaaccagtgggtaatgcacctttgttggcattagttcacaagatgaacaac
tgcctcagccagatggaacaatttccagtcaaagtacatgatttccctagtggaaatggg
acaggaggcagcttttctctcaacagaggatcacaggctttaaaatttttcaacacacat
caattaaaatgccagttacaaagacatccagactgtgcaaatgtgaagcagtggaagggt
ggacctgtcaagatcgaccctctggctttggtacaagccatcgagagataccttgtagtt
agagggtatggaagagtaagagaagatgatgaagacagtgatgacgatggatcagatgag
gaaatagatgagtctctggctgctcagttcctaaattcaggaaatgtaagacacaggctg
cagttttatattggagaacatttgctgccatataacatgaccgtgtatcaggcagtacgg
cagtttagtatacaggctgaagatgaaagagaatccacagatgatgagagcaatcctcta
ggcagagctggtatttggacaaagactcatacaatatggtataaacctgtgagagaggat
gaagaaagtaataaagattgtgttggtggtaaaagaggaagagcccaaacagctccaacg
aaaacttcccctagaaatgcaaaaaagcatgatgagttatggcatgatggagtgtgccca
tcagtatcaaatcctttagaagtttacctcattcccacaccacctgaaaatataacattt
gaagacccgtcattagatgtgatccttcttttaagagttttacatgctatcagtcgatac
tggtattacttgtatgataatgcaatgtgcaaggaaattattccaactagtgaatttatt
aacagtaagttaacagcaaaagcaaataggcaacttcaagatcctttagtaatcatgaca
ggaaacatcccaacatggcttactgagctaggaaaaacctgcccatttttctttcctttt
gatacccggcaaatgcttttttatgtaactgcatttgatcgggaccgagcaatgcaaaga
ttacttgataccaacccagaaatcaaccagtctgattctcaagatagcagagttgcacct
agattggatagaaaaaaacgtactgtgaaccgagaggagctgctgaaacaggcggagtct
gtgatgcaggacctcggcagctcacgggccatgttagaaatccagtatgaaaatgaggtt
ggtacaggtcttgggcctacactggagttttatgcgcttgtatctcaggaactacagaga
gctgacttgggtctttggagaggtgaagaagtaactcttagcaatccaaaagggagccaa
gaagggaccaagtatattcaaaacctccagggcctgtttgcgcttccctttggtaggaca
gcaaagccagctcatatcgcaaaggttaagatgaagtttcgcttcttaggaaaattaatg
gccaaggctatcatggatttcagattggtggaccttccccttggcttaccgttttataag
tggatgctacggcaagaaacttcactgacatcacacgatttgtttgacatcgacccagtt
gtagccagatcagtttatcacctagaagacattgtcagacagaagaagagacttgaacaa
gataaatcccagaccaaagagagtctacagtatgcgttagaaaccttgactatgaatggc
tgctcagttgaagatctaggactggatttcactctgccagggtttcccaatatcgaactg
aagaaaggagggaaggatataccagtcactatccacaatttagaggagtatctaagactg
gttatattctgggcactaaatgaaggcgtttctaggcagtttgattcgttcagagatgga
tttgaatcagtcttcccactcagtcatcttcagtacttctacccggaggaactggatcag
ctcctttgtggcagtaaagcagacacttgggatgcaaagacactgatggaatgctgtagg
cctgatcacggttatactcatgacagtcgggctgtgaagtttttgtttgagattctcagt
agttttgataatgagcagcagaggttatttctccagtttgtgactggtagcccaagattg
cctgttggaggattccggagtttgaatccacctttgacaattgtccgaaagacgtttgaa
tcaacagaaaacccagatgacttcttgccctctgtaatgacttgtgtgaactatcttaag
ttgccggactattcaagcattgagataatgcgtgaaaaactgttgatagcagcaagagaa
gggcagcagtcgttccatctttcctga
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integrated database retrieval system
