Pongo pygmaeus (Bornean orangutan): 129031533
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Entry
129031533 CDS
T10128
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
129031533 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppyg04040
]
129031533 (SCN9A)
Ion channels [BR:
ppyg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129031533 (SCN9A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
129031533
NCBI-ProteinID:
XP_054334086
LinkDB
All DBs
Position
11:complement(65744056..65922964)
Genome browser
AA seq
1859 aa
AA seq
DB search
MLIMCTILTNCIFMTMNNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWN
WLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLKHKCFRNSLENNETLESIMNTLESEEDFRKYFYYLEGS
KDALLCGFSTDSGQCPEGYTCMKIGRNPDYGYTSFDTFSWAFLALFRLMTQDYWENLYQQ
TLRAAGKTYMIFFVIVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKELEFQQMLDR
LKKEQEEAEAIAAAAAEYTSIRRSRIMGLSESSSETSKLSSKSAKERRNRRKKKNQKKPS
SGEEKGDAEKLSKSESEDSIRRKSFHLGVEGHRRAHEKRLSTPNQSPLSIRGSLFSARRS
SRTSLFSFKGRGRDIGSETEFADDEHSIFGENESRRGSLFVPHRPQERRSSNISQASRSP
PMLPVNGKMHSAVDCNGVVSLVDGRSALMLPNGQLLPEVIIDKATSDDSGTTNQIHKKRH
CSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHKFLIWNCSPY
WIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLAIGNLVFTGIFAA
EMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISDDCRLPRWH
MNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLNLFLALLLS
SFSSDNLTAIEEDPDANNLQIAVTRIKKGINYVKQTLHEFILKAFSKKPKISREIRQAED
LNTKKENYISNHTLAEMSKGHNFLKEKDKISGFGSSVDKHLMEDSDGQSFIHNPSLTVTV
PIAPGESDLENMNTEELSSDSDSEYSKVRLNRSSSSECSTVDNPLPGEGEEAEAEPMNSD
EPEACFTDGCVRRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVLMILLSSGAL
AFEDIYIERKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWLDFLIVDVS
LVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCL
IFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNVRWKNLKVNF
DNVGLGYLSLLQVATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVIFIIFGSFFTL
NLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKIQGCIF
DLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLISL
RHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKG
IRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGINDMFNFETFGNSMI
CLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFL
VVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYCKLSDFAAAL
DPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRSQMEERFMS
ANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLLNK
KDMAFDNVNENSSPEKTDATSSTTSPPSYDSVTKPDKEKYEQDRTEKEDKGKDSKESKK
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcatgtgcactattctgacaaactgcatatttatgaccatgaataacccaccg
gactggaccaaaaatgtcgagtacacttttactggaatatatacttttgaatcacttgta
aaaatccttgcaagaggcttctgtgtaggagaattcacttttcttcgtgacccatggaac
tggctggattttgttgtcattgtttttgcgtatttaacagaatttgtaaacctaggcaat
gtttcagctcttcgaactttcagagtattgagagctttgaaaactatttctgtaatccca
ggccttaagacaattgtaggggctttgatccagtcagtgaagaagctttctgatgtcatg
atcctgactgtgttctgtctgagtgtgtttgcactaattggactacagctgttcatggga
aacctgaagcataaatgttttcgaaattcacttgaaaataatgaaacattagaaagcata
atgaatactctagagagtgaagaagattttagaaaatacttttattacttggagggatcc
aaagatgctctcctttgtggtttcagcacagattcaggtcagtgtccagaggggtacact
tgtatgaaaattggcagaaaccctgattatggctacacgagctttgacactttcagctgg
gccttcttagccttgtttaggctaatgacccaagattactgggaaaacctttaccaacag
acgctgcgtgctgctggcaaaacctacatgatcttctttgtcatagtgattttcctgggc
tccttttatctaataaacttgatcctggctgtggttgccatggcttatgaagaacagaac
caggcaaacattgaagaagctaaacagaaagaattagaatttcaacagatgttagaccga
cttaaaaaagagcaagaagaagctgaggcaattgcagcggcagcagctgaatatacaagt
attaggagaagcagaattatgggcctctcggagagttcttctgaaacatccaaactgagc
tctaaaagtgctaaagaaaggagaaacagaagaaagaaaaagaatcaaaagaagccctcc
agtggagaagaaaagggagatgctgagaaattgtccaaatcagaatcagaggacagcatc
agaagaaaaagtttccaccttggtgtagaagggcataggcgagcacacgaaaagagattg
tctacccccaatcagtcaccgctcagcattcgtggctccttgttttctgcaaggcgaagc
agcagaacaagtctttttagtttcaaaggccgaggaagagatataggatctgagactgaa
tttgctgatgatgagcacagcatttttggagaaaatgagagcagaaggggctcactgttt
gtgccccacagaccccaggagcgacgcagcagtaacatcagccaagccagtagatcccca
ccaatgctgccggtgaacgggaaaatgcacagtgctgtggactgcaatggtgtggtctcc
ctggttgatggacgctcagccctcatgctccccaatggacagcttctgccagaggtgata
atagataaggcaacttctgatgacagcggcacgaccaatcaaatacacaagaaaaggcat
tgtagttcctatctcctttcagaggatatgctgaatgatcccaacctcagacagagagca
atgagtagagcaagcatattaacaaacactgtggaagaacttgaagagtccagacaaaaa
tgtccaccttggtggtacagatttgcacacaaattcttgatctggaattgctctccatat
tggataaaattcaaaaagtgtatctattttattgtaatggatccttttgtagatcttgca
attaccatttgcatagttttaaacacattatttatggctatggaacaccacccaatgact
gaggaattcaaaaatgtacttgctataggaaatttggtctttactggaatctttgcagct
gaaatggtgttaaaactgattgccatggatccatatgagtatttccaagtaggctggaat
atttttgacagccttattgtgactttaagtttagtggagctctttctagcagatgtggaa
ggattgtcagttctgcgatcattcagactgctccgagtcttcaagttggcaaaatcctgg
ccaacattgaacatgctgattaagatcattggtaactcagtaggggctctaggtaacctc
accttggtgttggccatcatcgtcttcatttttgctgtggtcggcatgcagctctttggt
aagagctacaaagaatgtgtctgcaagatcagtgatgactgtaggctcccacggtggcac
atgaatgacttcttccactccttcctgatcgtgttccgcgtgctgtgtggagagtggata
gagaccatgtgggactgtatggaggtcgccggtcaagccatgtgccttattgtttacatg
atggtcatggtcattggaaacctggtggtcctaaacctatttctggccttattattgagc
tcatttagttcagacaatcttacagcaattgaagaagaccctgatgcaaacaacctccag
attgcagtgactagaattaaaaagggaataaattatgtgaaacaaaccttacatgaattt
attctaaaagcattttccaaaaagccaaagatttccagggagataagacaagcagaagat
ctgaatactaagaaggaaaactatatttctaaccatacacttgctgaaatgagcaaaggt
cacaatttcctcaaggaaaaagataaaatcagtggttttggaagcagcgtggacaaacac
ttgatggaagacagtgatggtcaatcatttattcacaatcccagcctcacagtgacagtg
ccaattgcacctggggaatccgatttggaaaatatgaatactgaggaacttagcagtgat
tcagatagtgaatacagcaaagtgagattaaaccggtcaagctcctcagagtgcagcaca
gttgataaccctttgcctggagaaggagaagaagcagaggctgaacctatgaattccgac
gagccagaagcctgtttcacagatggttgtgtacggaggttctcatgctgccaagttaac
atagagtcagggaaaggaaaaatctggtggaacatcaggaaaacctgctacaagattgtt
gaacacagttggtttgaaagcttcattgtcctcatgatcctgctcagcagtggtgccctg
gcttttgaagatatttatattgaaaggaaaaagaccattaagattatcctggagtatgca
gacaagatcttcacttacatcttcattctggaaatgcttctaaaatggatagcatatggt
tataaaacatatttcaccaatgcctggtgttggctggatttcctaattgttgatgtttct
ttggttactttagtggcaaacactcttggctactcagatcttggccccattaaatccctt
cggacactgagagctttaagacctctaagagccttatctagatttgaaggaatgagggtg
gttgtgaatgcactcataggagcaattccttccatcatgaatgtgctacttgtgtgtctt
atattctggctgatattcagcatcatgggagtaaatttgtttgctggcaagttctatgag
tgtattaacaccacagatgggtcacggtttcctgcaagtcaagttccaaatcgttccgaa
tgttttgcccttatgaatgttagtcaaaatgtgcgatggaaaaacctgaaagtgaacttt
gataatgtcggacttggttacctatctctgcttcaagttgcaacttttaagggatggacg
attattatgtatgcagcagtggattctgttaatgtagacaagcagcccaaatatgaatat
agcctctacatgtatatttattttgtcatctttatcatctttgggtcattcttcactttg
aacttgttcattggtgtcatcatagataatttcaaccaacagaaaaaaaagcttggaggt
caagacatctttatgacagaagaacagaagaaatactataatgcaatgaaaaagctgggg
tccaagaagccacaaaagccaattcctcgaccagggaacaaaatccaaggatgtatattt
gacctagtgacaaatcaagcatttgatattagtatcatggttcttatctgtctcaacatg
gtaaccatgatggtagaaaaggagggtcaaagtcaacatatgactgaagttttatattgg
ataaatgtagtttttataatccttttcactggagaatgtgtgctaaaactgatctccctc
agacactactacttcactgtaggatggaatatttttgattttgtggttgtgattatctcc
attgtaggtatgtttctagctgatttgattgaaacgtattttgtgtcccctaccctgttc
cgagtgatccgtcttgccaggattggccgaatcctacgtctagtcaaaggagcaaagggg
atccgcacgctgctctttgctttgatgatgtcccttcctgcgttatttaacatcggcctc
ctgctcttcctggtcatgttcatctacgccatctttggaatgtccaactttgcctatgtt
aaaaaggaagatggaattaatgacatgttcaattttgagacctttggcaacagtatgatt
tgcctgttccaaattacaacctctgctggctgggatggattgctagcacctattcttaac
agtaagccacccgactgtgacccaaaaaaagttcatcctggaagttcagttgaaggagac
tgtggtaacccatctgttggaatattctactttgttagttatatcatcatatccttcctg
gttgtggtgaacatgtacattgcagtcatactggagaattttagtgttgccactgaagaa
agtactgaacctctgagtgaggatgactttgagatgttctatgaagtttgggagaagttt
gatccagatgcaactcagtttatagaatattgcaagctctctgattttgcagctgccctg
gatcctcctcttctcatagcaaaacccaacaaagtccagctcattgccatggatctgccc
atggtcagtggtgacaggatccattgtcttgacatcttatttgcttttacaaagcgtgtt
ttgggtgagagtggggagatggattctcttcgttcacagatggaagaaaggttcatgtct
gcaaatccttccaaagtgtcctatgaacccatcacaaccacactaaaacggaaacaagag
gacgtgtctgctactgtcattcagcgtgcttatagacgttaccgcttaaggcaaaatgtc
aaaaatatatcaagtatatacataaaagatggagacagagatgatgatttactcaataaa
aaagatatggcttttgataatgttaatgagaactcaagtccagaaaaaacagatgccact
tcatccaccacctctccaccttcatatgatagtgtaacaaagccagacaaagagaaatat
gaacaagacagaacagaaaaggaagacaaagggaaagacagcaaggaaagcaaaaaatag
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integrated database retrieval system
