Pongo pygmaeus (Bornean orangutan): 129031638
Help
Entry
129031638 CDS
T10128
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04136
Autophagy - other
ppyg04140
Autophagy - animal
ppyg04145
Phagocytosis
ppyg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129031638 (ATG16L1)
04140 Autophagy - animal
129031638 (ATG16L1)
04136 Autophagy - other
129031638 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129031638 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyg04131
]
129031638 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
ppyg03029
]
129031638 (ATG16L1)
Membrane trafficking [BR:
ppyg04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
129031638 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
129031638 (ATG16L1)
Mitochondrial biogenesis [BR:
ppyg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129031638 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_NOL10_N
NBCH_WD40
eIF2A
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_HPS5
Tricorn_2nd
TolB_like
Motif
Other DBs
NCBI-GeneID:
129031638
NCBI-ProteinID:
XP_054334121
LinkDB
All DBs
Position
11:133842744..133886340
Genome browser
AA seq
624 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDVPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAA
RRRSVSSFPVPQDNVDTHPGSGKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK
QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAV
AWSPSGLHVVSVDKGCKAVLWAQY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgctgacttcccccgctggaagcgccacatctcggagcaa
ctgaggcgccgggaccggctgcagagacaggcgttcgaggagatcatcctgcagtataac
aaattgctggaaaagtcagatcttcattcagtgttggcccagaaactacaggctgaaaag
catgacgtaccaaacaggcatgagataagtcctggacatgatggcacatggaatgacagt
cagctacaagaaatggcccaactgaggattaagcaccaagaggaactgactgaattacac
aagaaacgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcggaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgtttgcagactatctctgac
ctggagacggagtgcctagacctgcgcactaagctttgtgaccttgaaagagccaaccag
accctgaaggatgaatatgatgccctgcagatcacttttactgccttggagggaaaactg
aggaaaactacggaagagaaccaggagctggtcaccagatggatggctgagaaagcccag
gaagccaatcggcttaacgcagagaatgaaaaagactccaggaggcggcaagcccggctg
cagaaagagcttgcagaagcagcaaaagaacctctaccagtcgaacaggatgatgacatt
gaggtcatcgtggatgaaacctctgatcacacagaagagacctctcctgtgcgagccatc
agcagagcagccactaagcgactctcacagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcattcttcttctgatgctgcc
aggagacgctctgtctcttccttcccagtcccccaggacaatgtggatactcatcctggt
tctggtaaagaagtgagggtaccaactactgccttgtgtgtgttcgatgcacatgatggg
gaagtcaatgctgtgcagttcagtccaggttcccggttactggccaccggaggcatggac
cgcagggttaagctttgggaagtatttggagaaaaatgtgagttcaagggttccctatct
ggcagtaatgcaggaattacaagcattgaatttgatagtgctggatcttacctcttagca
gcttcaaatgattttgcaagccgaatctggactgtggatgattatcggttacggcacaca
ctcacgggacacagtgggaaagtgctgtctgctaagttcctgctggacaatgcgcggatt
gtctcaggaagtcacgaccggactctcaaactctgggatctacgcagcaaagtctgcata
aagacagtgtttgcaggatccagttgcaatgatattgtctgcacagagcaatgtgtaatg
agtggacattttgacaagaaaattcgtttctgggacattcgatcagagagcatagttcga
gagatggagctgttgggaaagattactgccctggacttaaacccagaaaggactgagctc
ctgagctgctcccgtgatgacttgctaaaagttatcgatctccgaacaaatgctatcaag
cagacgttcagtgcacctgggttcaagtgtggctctgactggaccagagttgtcttcagc
cctgatggcagttacgtggcggcaggctctgctgagggctctctctatatctggagtgtg
ctcacagggaaagtggaaaaggttctttcaaagcagcacagctcatccatcaatgcggtg
gcgtggtcgccctctggcttgcacgttgtcagtgtggacaaaggatgcaaagctgtgctg
tgggcacagtattga
DBGET
integrated database retrieval system
