Pongo pygmaeus (Bornean orangutan): 129032158
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Entry
129032158 CDS
T10128
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04151
PI3K-Akt signaling pathway
ppyg04382
Cornified envelope formation
ppyg04510
Focal adhesion
ppyg04512
ECM-receptor interaction
ppyg04518
Integrin signaling
ppyg04820
Cytoskeleton in muscle cells
ppyg04926
Relaxin signaling pathway
ppyg04933
AGE-RAGE signaling pathway in diabetic complications
ppyg04974
Protein digestion and absorption
ppyg05146
Amoebiasis
ppyg05165
Human papillomavirus infection
ppyg05200
Pathways in cancer
ppyg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129032158 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129032158 (COL4A3)
04518 Integrin signaling
129032158 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129032158 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129032158 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
129032158 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
129032158 (COL4A3)
09158 Development and regeneration
04382 Cornified envelope formation
129032158 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129032158 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
129032158 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129032158 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
129032158 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129032158 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppyg04147
]
129032158 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
ppyg00536
]
129032158 (COL4A3)
Exosome [BR:
ppyg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129032158 (COL4A3)
Glycosaminoglycan binding proteins [BR:
ppyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129032158 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129032158
NCBI-ProteinID:
XP_054335311
LinkDB
All DBs
Position
11:127765136..127913365
Genome browser
AA seq
1670 aa
AA seq
DB search
MSPRTAPRPQVLLLPLLLVLLAAAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSP
GQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGITGLPGFSGSPGLPGTPGNTGPYGLV
GVPGCNGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKGEDIELDAKGDPGLPGAPG
PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGPQGKPG
KDGVPGFPGSEGVKGNRGFPGITGEDGIKGQKGDIGLPGFRGPTEYYDTHQEKGDEGTPG
PPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGLPGKDAMGTPGSP
GCPGSPGLPGSPGPPGPPGGIVFRKGPPGDRGLPGYLGSPGIPGVDGPKGEPGLLCTQCP
YIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK
GETLQPEGQVGAPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGD
PGSPGSPGPTGPAGPPGYGPQGEPGPQGTQGAPGDPGPPGEAGPRGELSVSTPVPGLPGP
PGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSL
GCPGKMGEPGLPGKPGLPGTKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG
TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRIGKTGSKGD
PGIPGLDRSGFPGETGSPGMPGHQGEMGPPGQKGYPGNPGILGPPGEDGVIGMMGFPGAI
GPPGPPGNPGMPGQRGSPGIPGVKGHRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLK
GFTGNPGEKGNRGIPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGELGLRGIPGSMGNR
GMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMG
KKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGFLGPPGIRGPPG
LPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLGAPPGPRGNPGAQGAKGDRGAPGFP
GLPGRKGVTGDAGPRGPTGIEGFPGPPGLPGAMIPGQKGNHGPPGSRGSPGEPGPPGPPG
SHVIGIKGDKGSMGHPGPKGPPGTVGDMGPPGHLGAPGTPGLPGLRGDPGFQGFPGVTGE
KGNPGFLGSIGPPGPIGPKGPPGIRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGP
PGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPGPPGSDGLPGLKGKRGDSGSPAT
WTTRGFVFTRHSQTTAIPSCPEGTVPLYSGFSFLFVQGNQRAHGQDLGTLGSCLQRFTTM
PFLFCNVNDVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAIAIAV
HSQSTDIPPCPHGWISLWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKRH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggacggcccccaggccgcaggtgctcctactgccgctcctgctggtgctc
ctggcggcggcgcccgcagccagcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatggggccaaaggggagaagggggagaaaggctttcctggaccccccggttctcct
ggccagaaaggattcacaggtcctgaaggcttacctggaccacagggacccaagggcttt
ccaggacttccaggactcacgggttccaaaggtgtaaggggaataactggattgccagga
ttttccggttctcctggacttccaggcaccccaggcaatactgggccttatggacttgtc
ggtgtaccaggatgcaatggttctaagggtgagcaggggtttccaggactcccagggaca
ctgggctacccagggatcccgggtgctgctggtttgaaaggacaaaagggtgctcctgct
aaaggagaagatatagaacttgatgcaaaaggcgaccccgggttgccaggggctccagga
ccccagggtttgccaggccctccaggttttcctgggcctgttggcccacctggtcctccg
ggattctttggctttccaggagccatgggacctagaggacctaagggtcacatgggtgaa
agagtgataggacataaaggagagcggggtgtgaaagggttaacaggacccccgggacca
ccaggaacagttattgtgaccctaactggcccagataacagaacggacctcaagggggaa
aagggagacaagggagcaatgggcgagcctggacctcctggaccctcaggactgcctgga
gaatcatatggatctgaaaagggtgctcctggagaccctggcccacagggaaaacccgga
aaagatggtgttcctggcttccctggaagtgagggagtcaagggcaacaggggtttccct
gggataacgggtgaagatggcattaagggacagaaaggggacattggccttccaggattt
cgtggtccaacagaatattatgacacacaccaggaaaagggagatgaaggcactccaggc
ccaccagggcccagaggagctcgtggcccacaaggtcccagtggtccccccggagttcct
ggaagtcctggatcttcaaggcctggcctcagaggagcccctggatggccaggcttgaaa
ggaagtaaaggggaacgaggcctcccaggaaaggatgccatggggactcctgggtcccca
ggttgtcctggttcaccaggccttccaggatcaccgggacctccaggaccaccaggtggt
attgtttttcgcaagggtccacctggagatcgtggactgccaggctatctagggtctcca
ggaatcccaggagttgacgggcccaaaggagaaccaggcctcctgtgtacacagtgccct
tatatcccagggcctcccggtctcccaggattgccagggttacatggtgtaaaaggaatc
ccaggaagacaaggtgcagctggcttgaaaggaagcccagggtccccaggaaatacaggt
cttccaggatttccaggtttcccaggtgcccagggtgacccaggacttaaaggagaaaaa
ggtgaaacacttcagcctgaggggcaagtgggtgccccaggtgacccggggctcagaggc
caacctgggagaaagggcttggatggaattcctggaactccgggagtgaaaggattacca
ggacctaaaggcgaactggctctgagtggtgagaagggggaccaaggtcctccaggggat
cctggctcccctgggtccccaggacctacaggaccagctggaccacctggctacggaccc
caaggagaacctggtcctcagggcacgcaaggagctcctggagaccctggaccacccgga
gaagccggccctaggggagagctcagtgtttcaacaccagttccaggcctaccaggacct
ccagggccccctggccatcctggcccccaaggtccacctggtatccctggatccctgggg
aaatgtggagatcctggtcttccagggcctgatggtgaaccaggaattccaggaattgga
tttcctgggcctcctggacctaaaggagaccaaggttttccgggtacaaaaggatcactg
ggttgtcctggaaaaatgggagagcctgggttacctggaaagccaggcctcccaggaacc
aagggagaaccagcagtagccatgcctggaggaccaggaacaccaggttttccaggagaa
agaggcaattctggggaacatggagaaattggactccctggacttccaggtctccctgga
actccaggaaatgaagggcttgatggaccacgaggagatccagggcagcctggaccacct
ggagaacaaggacccccaggaaggtgcatagagggtcccaggggagcccaaggacttcca
ggcttaaatggattgaaagggcaacaaggcagaataggtaaaacagggtcaaagggagac
ccaggaattccaggcttggatagatcaggatttcctggagaaactggatcaccaggaatg
ccaggtcatcaaggcgagatgggaccaccgggtcaaaaaggatatccaggaaatccggga
attttagggccaccaggtgaagatggagtgattgggatgatgggctttcctggagccatt
ggtcctccggggccccctgggaacccaggcatgccagggcagagggggagccctggaatt
ccaggagtaaaaggccatagaggaaccccaggagccaagggggaacaaggagataaagga
aatcccgggccttctgagatatcccacgtaataggggacaaaggagaaccaggtctcaaa
ggattcacaggaaatccaggtgagaaaggaaacagaggcattccagggatgccaggttta
aaaggcctcaaaggactacctggaccagcaggaccaccaggccccagaggagatttgggc
agcactgggaatcctggagaactaggactgcgtggtataccaggaagcatggggaacagg
ggcatgccaggttctaaaggaaaaaggggaactctgggattcccaggtcgagcaggaaga
ccaggcctcccaggtattcacggtctccagggagataagggagagccaggttattcagaa
ggtacaaggccaggaccaccgggaccaacgggggatccaggactgccgggtgatatggga
aagaaaggagaaatggggcaacctggcccacctggacatttggggcctgctggacctgag
ggagcccctggaagtcctggaagtcctggcctcccaggaaagccaggtcctcatggtgat
ttgggttttaaaggaatcaaaggcttcctgggccctccaggaatcagaggccctccaggt
cttccaggattcccaggatctcctggaccaatgggtataagaggtgaccaaggacgtgat
ggaattcctggtccagccggagaaaagggagaaacgggtttattgggggcccctccaggc
ccaagagggaaccctggtgctcaaggagccaaaggagacaggggagccccaggttttcct
ggcctcccaggcagaaaaggggtcacgggagatgctgggcctcgagggcccacaggcata
gaaggattcccagggccaccaggtctgcccggtgcaatgatccctggccagaaaggaaat
catggtccaccaggctcaagaggaagcccaggtgagcctggtccccctggacctccaggg
agtcacgtaataggcataaaaggagacaaagggtctatgggccaccctggcccgaaaggt
ccacctggaactgtaggagacatgggaccaccaggtcatctgggagcaccaggtactcca
ggtcttccaggacttagaggtgatcctggattccaggggtttccaggcgtgacaggagaa
aagggtaatcctggatttctaggatccattggacctccaggaccaattgggccaaaagga
ccacctggtatacgtggagaccctggcacacttaagattatctcccttccaggaagccca
gggccacctggcacacctggagaaccagggatgcagggagaacctgggccaccagggcca
cctggaaacctaggaccctgtgggccaagaggtaagccaggcaaggatggaaaaccagga
actcctggaccagctggagaaaaaggcaacaaaggttctaaaggagagccaggaccacct
ggatcagatggattgccaggtttgaaaggaaaacgtggagacagtggatcacctgcaacc
tggacaacgagaggctttgtcttcacccgacacagtcaaaccacagcaattccttcatgt
ccagaggggacagtgccactctacagcgggttttcttttctttttgtacaaggaaatcaa
cgagcccacggacaagaccttggaactcttggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatgtcaatgatgtatgtaatttcgcatctcgaaatgattattca
tactggctgtcaacaccagctctgatgccaatggacatggctcccattactggcagggcc
cttgagccttacataagcagatgcactgtttgtgaaggtcctgcgatcgccatagccgtt
cacagccaaagcactgacattcctccatgtcctcacggctggatttctctctggaaagga
ttttcattcatcatgttcacaagtgcaggttctgagggcaccgggcaagcactggcctcc
cctggctcctgcctggaagaattccgagccagcccatttctagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggctggcttcattaaacccagaaaga
atgttcagaaagcctataccatcaactgtgaaagctggggaattagaaaaaataataagt
cgctgtcaggtgtgcatgaagaaaagacactga
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integrated database retrieval system
