Pongo pygmaeus (Bornean orangutan): 129032158
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Entry
129032158 CDS
T10128
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04151
PI3K-Akt signaling pathway
ppyg04510
Focal adhesion
ppyg04512
ECM-receptor interaction
ppyg04820
Cytoskeleton in muscle cells
ppyg04926
Relaxin signaling pathway
ppyg04933
AGE-RAGE signaling pathway in diabetic complications
ppyg04974
Protein digestion and absorption
ppyg05146
Amoebiasis
ppyg05165
Human papillomavirus infection
ppyg05200
Pathways in cancer
ppyg05222
Small cell lung cancer
Brite
Exosome [BR:
ppyg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129032158 (COL4A3)
Glycosaminoglycan binding proteins [BR:
ppyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129032158 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129032158
NCBI-ProteinID:
XP_054335311
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Position
11:127765136..127913365
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AA seq
1670 aa
AA seq
DB search
MSPRTAPRPQVLLLPLLLVLLAAAPAASKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSP
GQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGITGLPGFSGSPGLPGTPGNTGPYGLV
GVPGCNGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKGEDIELDAKGDPGLPGAPG
PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGPQGKPG
KDGVPGFPGSEGVKGNRGFPGITGEDGIKGQKGDIGLPGFRGPTEYYDTHQEKGDEGTPG
PPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGLPGKDAMGTPGSP
GCPGSPGLPGSPGPPGPPGGIVFRKGPPGDRGLPGYLGSPGIPGVDGPKGEPGLLCTQCP
YIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK
GETLQPEGQVGAPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGD
PGSPGSPGPTGPAGPPGYGPQGEPGPQGTQGAPGDPGPPGEAGPRGELSVSTPVPGLPGP
PGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSL
GCPGKMGEPGLPGKPGLPGTKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG
TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRIGKTGSKGD
PGIPGLDRSGFPGETGSPGMPGHQGEMGPPGQKGYPGNPGILGPPGEDGVIGMMGFPGAI
GPPGPPGNPGMPGQRGSPGIPGVKGHRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLK
GFTGNPGEKGNRGIPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGELGLRGIPGSMGNR
GMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMG
KKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGFLGPPGIRGPPG
LPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLGAPPGPRGNPGAQGAKGDRGAPGFP
GLPGRKGVTGDAGPRGPTGIEGFPGPPGLPGAMIPGQKGNHGPPGSRGSPGEPGPPGPPG
SHVIGIKGDKGSMGHPGPKGPPGTVGDMGPPGHLGAPGTPGLPGLRGDPGFQGFPGVTGE
KGNPGFLGSIGPPGPIGPKGPPGIRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGP
PGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPGPPGSDGLPGLKGKRGDSGSPAT
WTTRGFVFTRHSQTTAIPSCPEGTVPLYSGFSFLFVQGNQRAHGQDLGTLGSCLQRFTTM
PFLFCNVNDVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAIAIAV
HSQSTDIPPCPHGWISLWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKRH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggacggcccccaggccgcaggtgctcctactgccgctcctgctggtgctc
ctggcggcggcgcccgcagccagcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatggggccaaaggggagaagggggagaaaggctttcctggaccccccggttctcct
ggccagaaaggattcacaggtcctgaaggcttacctggaccacagggacccaagggcttt
ccaggacttccaggactcacgggttccaaaggtgtaaggggaataactggattgccagga
ttttccggttctcctggacttccaggcaccccaggcaatactgggccttatggacttgtc
ggtgtaccaggatgcaatggttctaagggtgagcaggggtttccaggactcccagggaca
ctgggctacccagggatcccgggtgctgctggtttgaaaggacaaaagggtgctcctgct
aaaggagaagatatagaacttgatgcaaaaggcgaccccgggttgccaggggctccagga
ccccagggtttgccaggccctccaggttttcctgggcctgttggcccacctggtcctccg
ggattctttggctttccaggagccatgggacctagaggacctaagggtcacatgggtgaa
agagtgataggacataaaggagagcggggtgtgaaagggttaacaggacccccgggacca
ccaggaacagttattgtgaccctaactggcccagataacagaacggacctcaagggggaa
aagggagacaagggagcaatgggcgagcctggacctcctggaccctcaggactgcctgga
gaatcatatggatctgaaaagggtgctcctggagaccctggcccacagggaaaacccgga
aaagatggtgttcctggcttccctggaagtgagggagtcaagggcaacaggggtttccct
gggataacgggtgaagatggcattaagggacagaaaggggacattggccttccaggattt
cgtggtccaacagaatattatgacacacaccaggaaaagggagatgaaggcactccaggc
ccaccagggcccagaggagctcgtggcccacaaggtcccagtggtccccccggagttcct
ggaagtcctggatcttcaaggcctggcctcagaggagcccctggatggccaggcttgaaa
ggaagtaaaggggaacgaggcctcccaggaaaggatgccatggggactcctgggtcccca
ggttgtcctggttcaccaggccttccaggatcaccgggacctccaggaccaccaggtggt
attgtttttcgcaagggtccacctggagatcgtggactgccaggctatctagggtctcca
ggaatcccaggagttgacgggcccaaaggagaaccaggcctcctgtgtacacagtgccct
tatatcccagggcctcccggtctcccaggattgccagggttacatggtgtaaaaggaatc
ccaggaagacaaggtgcagctggcttgaaaggaagcccagggtccccaggaaatacaggt
cttccaggatttccaggtttcccaggtgcccagggtgacccaggacttaaaggagaaaaa
ggtgaaacacttcagcctgaggggcaagtgggtgccccaggtgacccggggctcagaggc
caacctgggagaaagggcttggatggaattcctggaactccgggagtgaaaggattacca
ggacctaaaggcgaactggctctgagtggtgagaagggggaccaaggtcctccaggggat
cctggctcccctgggtccccaggacctacaggaccagctggaccacctggctacggaccc
caaggagaacctggtcctcagggcacgcaaggagctcctggagaccctggaccacccgga
gaagccggccctaggggagagctcagtgtttcaacaccagttccaggcctaccaggacct
ccagggccccctggccatcctggcccccaaggtccacctggtatccctggatccctgggg
aaatgtggagatcctggtcttccagggcctgatggtgaaccaggaattccaggaattgga
tttcctgggcctcctggacctaaaggagaccaaggttttccgggtacaaaaggatcactg
ggttgtcctggaaaaatgggagagcctgggttacctggaaagccaggcctcccaggaacc
aagggagaaccagcagtagccatgcctggaggaccaggaacaccaggttttccaggagaa
agaggcaattctggggaacatggagaaattggactccctggacttccaggtctccctgga
actccaggaaatgaagggcttgatggaccacgaggagatccagggcagcctggaccacct
ggagaacaaggacccccaggaaggtgcatagagggtcccaggggagcccaaggacttcca
ggcttaaatggattgaaagggcaacaaggcagaataggtaaaacagggtcaaagggagac
ccaggaattccaggcttggatagatcaggatttcctggagaaactggatcaccaggaatg
ccaggtcatcaaggcgagatgggaccaccgggtcaaaaaggatatccaggaaatccggga
attttagggccaccaggtgaagatggagtgattgggatgatgggctttcctggagccatt
ggtcctccggggccccctgggaacccaggcatgccagggcagagggggagccctggaatt
ccaggagtaaaaggccatagaggaaccccaggagccaagggggaacaaggagataaagga
aatcccgggccttctgagatatcccacgtaataggggacaaaggagaaccaggtctcaaa
ggattcacaggaaatccaggtgagaaaggaaacagaggcattccagggatgccaggttta
aaaggcctcaaaggactacctggaccagcaggaccaccaggccccagaggagatttgggc
agcactgggaatcctggagaactaggactgcgtggtataccaggaagcatggggaacagg
ggcatgccaggttctaaaggaaaaaggggaactctgggattcccaggtcgagcaggaaga
ccaggcctcccaggtattcacggtctccagggagataagggagagccaggttattcagaa
ggtacaaggccaggaccaccgggaccaacgggggatccaggactgccgggtgatatggga
aagaaaggagaaatggggcaacctggcccacctggacatttggggcctgctggacctgag
ggagcccctggaagtcctggaagtcctggcctcccaggaaagccaggtcctcatggtgat
ttgggttttaaaggaatcaaaggcttcctgggccctccaggaatcagaggccctccaggt
cttccaggattcccaggatctcctggaccaatgggtataagaggtgaccaaggacgtgat
ggaattcctggtccagccggagaaaagggagaaacgggtttattgggggcccctccaggc
ccaagagggaaccctggtgctcaaggagccaaaggagacaggggagccccaggttttcct
ggcctcccaggcagaaaaggggtcacgggagatgctgggcctcgagggcccacaggcata
gaaggattcccagggccaccaggtctgcccggtgcaatgatccctggccagaaaggaaat
catggtccaccaggctcaagaggaagcccaggtgagcctggtccccctggacctccaggg
agtcacgtaataggcataaaaggagacaaagggtctatgggccaccctggcccgaaaggt
ccacctggaactgtaggagacatgggaccaccaggtcatctgggagcaccaggtactcca
ggtcttccaggacttagaggtgatcctggattccaggggtttccaggcgtgacaggagaa
aagggtaatcctggatttctaggatccattggacctccaggaccaattgggccaaaagga
ccacctggtatacgtggagaccctggcacacttaagattatctcccttccaggaagccca
gggccacctggcacacctggagaaccagggatgcagggagaacctgggccaccagggcca
cctggaaacctaggaccctgtgggccaagaggtaagccaggcaaggatggaaaaccagga
actcctggaccagctggagaaaaaggcaacaaaggttctaaaggagagccaggaccacct
ggatcagatggattgccaggtttgaaaggaaaacgtggagacagtggatcacctgcaacc
tggacaacgagaggctttgtcttcacccgacacagtcaaaccacagcaattccttcatgt
ccagaggggacagtgccactctacagcgggttttcttttctttttgtacaaggaaatcaa
cgagcccacggacaagaccttggaactcttggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatgtcaatgatgtatgtaatttcgcatctcgaaatgattattca
tactggctgtcaacaccagctctgatgccaatggacatggctcccattactggcagggcc
cttgagccttacataagcagatgcactgtttgtgaaggtcctgcgatcgccatagccgtt
cacagccaaagcactgacattcctccatgtcctcacggctggatttctctctggaaagga
ttttcattcatcatgttcacaagtgcaggttctgagggcaccgggcaagcactggcctcc
cctggctcctgcctggaagaattccgagccagcccatttctagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggctggcttcattaaacccagaaaga
atgttcagaaagcctataccatcaactgtgaaagctggggaattagaaaaaataataagt
cgctgtcaggtgtgcatgaagaaaagacactga
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