Pongo pygmaeus (Bornean orangutan): 129032549
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Entry
129032549 CDS
T10128
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X2
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129032549 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129032549 (DHX36)
03012 Translation factors [BR:
ppyg03012
]
129032549 (DHX36)
Enzymes [BR:
ppyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129032549 (DHX36)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129032549 (DHX36)
Translation factors [BR:
ppyg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129032549 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
DUF6782
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
129032549
NCBI-ProteinID:
XP_054335917
LinkDB
All DBs
Position
2:complement(163187414..163238408)
Genome browser
AA seq
1010 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGGPAGGHGGNRGSGGGGGGGGGGGGRGGRGRHPGHLK
GREIGMWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQGKNDKESEAQISWFA
PEDHGYGTEVSTKNTPRSEKKLDIQEKKLINQEKKKFRIRNRSYIDRDSEYLLQENEPDG
TLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVVSGETGCGKTT
QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS
RLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS
DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVMEYLLEDVIEKIRYVPEQKEHRSQF
KRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMDDDKVDLNLIVAL
IRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFK
RTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ
RKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRL
MDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV
LTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEK
DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAG
LYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIY
LYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQ
EKIESPHPVDWNDTKSRDCAVLSAIIDLIKTQEKATPRNFPPRFQDGYYS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgtgatgggggtccccgcagctccggtggg
ggctatggaggggggccagcagggggtcatggagggaaccgaggctccggaggaggcggc
ggcggcggcggcggagggggtggtcgaggcggcaggggccggcatcctgggcacctgaaa
ggccgcgaaatcggcatgtggtacgcgaagaaacaggggcagaagaacaaggaagcggag
aggcaagagagagctgtagtacacatggatgaacgacgagaagaacaaattgtacagtta
ctgaattctgttcaagggaagaatgataaagagtcggaagcacaaatatcctggtttgct
cctgaggatcatggatacggtactgaagtttctactaagaacacaccacgctcagagaag
aaacttgacatccaggaaaagaagttgataaaccaagaaaaaaaaaagtttagaatcagg
aacagatcatatattgaccgagattctgagtatctcttgcaagaaaatgaaccagatgga
actttagaccaaaaattattggaagatttacaaaagaaaaaaaatgaccttcggtatatt
gaaatgcagcatttcagagaaaagctgccttcgtatggaatgcaaaaggaattggtaaat
ttaattgataaccatcaggtaacagtagtaagtggtgaaactggttgtggcaaaaccact
caagttactcagttcattttggataactacattgaaagaggaaaaggatctgcttgcagg
atagtttgtactcagccaagaagaattagtgccatttcagttgccgaaagagtagctgca
gaaagggcagaatcttgtggcaatggtaatagtactggatatcaaattcgtctccagagt
cggttgccaaggaaacagggttctatcttatactgtacaacaggaatcatccttcagtgg
ctccagtcagacccgtatttgtccagtgttagtcatatcgtacttgatgaaatccatgaa
agaaatctgcagtcagatgttttaatgactgttgttaaagatcttctcaattttcgatct
gacttgaaagtaatattgatgagtgcaacattgaatgcggaaaagttttcagaatatttt
ggtaactgtccaatgatacatatacctggttttacctttccggttatggaatatcttttg
gaagatgtaattgaaaaaataaggtatgttccagaacaaaaagaacacagatcccagttt
aagaggggtttcatgcaagggcatgtaaatagacaagaaaaagaagaaaaagaagcaata
tataaagaacgttggccagattatgtaagggaactgcgaagaaggtattcagcaagtact
gtagatgttatagaaatgatggatgatgataaagttgatctgaatttgattgttgccctt
atccgatacattgttttggaagaagaggatggtgcgatactggtctttctaccaggctgg
gacaatatcagcactttacatgatctcttgatgtcacaagtaatgtttaaatcagataaa
tttttaattatacctttacattcactgatgcctacggttaaccagacacaggtgtttaaa
agaacccctcctggtgttcggaaaatagtcattgctaccaacattgcggagactagcatt
accatagatgatgtcgtttatgtgatagatggaggaaaaataaaagagacacattttgat
actcagaacaatatcagtacaatgtccgctgagtgggttagtaaagctaatgccaaacag
agaaaaggtcgagctggaagagttcaacctggtcattgctatcatctgtataatggtctt
agagcaagtcttctagatgactatcaactgccagaaattttgagaactcctttggaagaa
ctttgtttacaaataaagattttaaggctaggtggaattgcttattttctgagtagatta
atggacccaccatcaaatgaggcagtgttactctccataagacacctgatggagctgaac
gctttggataaacaagaagaattgacacctcttggagtccacttggcacgattacccgtt
gagccacatattggaaaaatgattctttttggagcactgttctgctgcttagacccagta
ctcactattgctgctagtctcagtttcaaagatccatttgtcattccactgggaaaagaa
aagattgcagatgcaagaagaaaggaattggcaaaggatactagaagtgatcacttaaca
gttgtgaatgcgtttgagggctgggaagaggctaggcgacgtggtttcagatacgaaaag
gactattgctgggaatattttctgtcttcaaacacactgcagatgctgcataacatgaaa
ggacagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctaaagat
ccagaatctaatataaattcagataatgagaagataattaaagctgtcatctgtgctggt
ttatatcccaaagttgctaaaattcgactaaatttgggtaaaaaaagaaaaatggtaaaa
gtttacacaaaaactgatggcctggttgctgttcatcctaaatctgttaatgtggagcaa
acagactttcactacaactggcttatctatcacctaaagatgaggacaagcagtatatac
ttgtatgactgcacagaggtttccccatactgtctcttgttttttggaggtgacatttcc
atccagaaggataacgatcaggaaactattgctgtagatgagtggattgtatttcaatct
ccagcaagaattgcccatcttgttaaggaattaagaaaagaactagatattcttctgcaa
gagaagattgaaagtcctcatcctgtagactggaatgacactaaatccagagactgtgca
gtactgtcagctattatagacttgatcaaaacacaggaaaaggcaactcccaggaacttt
ccgccacgattccaggatggatattacagctga
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