Pongo pygmaeus (Bornean orangutan): 129032573
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Entry
129032573 CDS
T10128
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X1
KO
K04638
intraflagellar transport protein 57
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg05016
Huntington disease
ppyg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
129032573 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
129032573 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppyg03037
]
129032573 (IFT57)
Cilium and associated proteins [BR:
ppyg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
129032573 (IFT57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
Ribonuc_L-PSP
DUF745
Motif
Other DBs
NCBI-GeneID:
129032573
NCBI-ProteinID:
XP_054335980
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Position
2:complement(40815896..40876069)
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AA seq
429 aa
AA seq
DB search
MTAALAVVTTSGLEDGVPRSRGEGTGEVVLERGPGAAYHMFVVMEDLVEKLKLLRYEEEF
LRKSNLKAPSRHYFALPTNPGEQFYMFCTLAAWLINKAGRPFEQPQEYDDPNATISNILS
ELRSFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYIGFTWKRPIYPVEELEEESVAE
DDAELTLNKVDEEFVEEETDNEENFIDLNVLKAQTYHLDMNETAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEITRTLEKI
CSREKYINNQLENLVQEYRAAQAQLSEAKERYQQGNGGVTERTRLLSEVMEELEKVKQEM
EEKGSSMTDGAPLVKVKQSLTKLKQETVEMDIRIGIVEHTLLQSKLKEKSNMTRNMHATV
IPEPATGFY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgccctggccgtcgtcacgacgtcgggtttggaagatggggtgcctaggtcc
cgtggcgaagggaccggggaagtggtcttggagcggggtcccggcgcggcctaccacatg
ttcgtggtgatggaggacttggtggagaagctgaagctgctccgctacgaggaggagttc
ctccggaagagcaacctgaaggccccgtccagacactattttgcactgcctaccaaccct
ggcgaacagttctacatgttttgtactcttgctgcttggttgattaataaagcgggacgt
ccctttgagcagcctcaagaatatgatgaccctaatgcaacaatatctaacatactatcc
gagcttcggtcatttgggagaactgcagattttcctccttcaaaattaaagtcaggttat
ggagaacatgtatgctatgttcttgattgcttagctgaagaagcattgaaatatattggt
ttcacctggaaaaggccaatatacccagtagaagaattagaagaagaaagtgttgcagaa
gatgatgcagaattaacactaaataaagtggatgaagaatttgtggaagaagagacagat
aatgaagaaaattttattgatctcaacgttttaaaggcccagacatatcacttggatatg
aacgagactgccaaacaagaagatattttggaatccacaacagatgctgcagaatggagc
ctagaagtggaacgtgtactaccgcaactgaaagtcacgattaggactgacaataaggat
tggagaatccatgttgaccaaatgcaccagcacaaaagtggaattgaatctgctctaaag
gagaccaagggatttttggacaaactccataatgaaattactaggactttggaaaagatc
tgcagccgagaaaagtacatcaacaatcagcttgagaatttggttcaagaatatcgtgca
gctcaagcccagctgagtgaggcaaaggagcgataccagcagggaaatggaggagtaacg
gaaagaaccagactcctctctgaggttatggaagaattagaaaaggtaaaacaagaaatg
gaagaaaagggcagcagcatgactgatggtgctcctttggtgaaggttaaacagagctta
acaaaactgaagcaagaaactgtagagatggacattagaattggcattgtggaacacacg
ctactccaatcaaagctgaaggagaagtccaacatgactaggaacatgcatgccacagtt
attccagaaccagcaacaggcttttattaa
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