Pongo pygmaeus (Bornean orangutan): 129033146
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Entry
129033146 CDS
T10128
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04390
Hippo signaling pathway
ppyg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
129033146 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
129033146 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129033146 (SOX2)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129033146 (SOX2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129033146
NCBI-ProteinID:
XP_054337188
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Position
2:190930796..190933370
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AA seq
319 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQL
GYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHY
QSGPVPGTAINGTLPLSHM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggtaactccaccgcggcggcggccggcggcaaccagaagaacagcccg
gaccgcgtcaagcggcccatgaatgccttcatggtgtggtcccgcgggcagcggcgcaag
atggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgcggag
tggaaacttttgtcggagacggagaagaggccgttcatcgacgaggctaagcggctgcga
gcgctgcacatgaaggagcacccggattataaataccggccgcggcggaaaaccaagacg
ctcatgaagaaggataagtacacgctgcccggcgggctgctggcccccggcggcaacagc
atggcgagcggggtcggggtgggcgccggcctgggcgcgggcgtgaaccagcgcatggac
agttacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccagctg
ggctacccgcagcacccgggcctcaatgcgcacggcgcagcgcagatgcagcccatgcac
cgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgccaacctacagcatgtcctactcgcagcagggcacccctggcatggctcttggc
tccatgggttcggtggtcaagtccgaggccagctccagcccccctgtggttacctcttcc
tcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtatctc
cccggcgccgaggtgccggaacccgccgcccccagcagacttcacatgtcccagcactac
cagagcggcccggtgcccggcacggccattaacggcacactgcccctctcacacatgtga
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