Pongo pygmaeus (Bornean orangutan): 129033246
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Entry
129033246 CDS
T10128
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
Ion channels [BR:
ppyg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129033246 (SCN10A)
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NCBI-GeneID:
129033246
NCBI-ProteinID:
XP_054337462
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Position
2:114909693..115005663
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AA seq
1959 aa
AA seq
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MEFPIGSLENNNFRRFTPESLVEIEKQIAAKQATKKAREKHREQKDQEEKARPQLDLKAC
NQLPKFYGELPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVCMTRTDLPEKIEYVFTVIYTFEALIKILARGF
CLNEFAYLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNDMAVNETTNYSSHRKRDI
YINKRGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKK
FQEALEILQKEQEVLAALGIDTTSLHSHNGSPLNSKNASERRHRLKPTVSEGSTEDNKSP
RSDPYNQRRMSFLGLTSGKRRASHGSVFHFWSPGRDTSLPEGVTDDGVFPGDHESHWGSL
LLGGGAGQQGPFPRSPLPQPSNPDSRHGEDEHQPPPTSELAPGAVDVSAFDAGQKKTFLS
AEYLDEPFRAQRAMSVVSIITSVLEELEESEQKCPLCLTSLAQKYLIWDCCPMWMKLKTI
LFGLVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKII
AFDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRNNRKNISAPHEDWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSVCLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LTAPEDDGEVNNLQVALARIQVFGHRTKQALCSFFSRPCPFPRPKAEPELVVKLPLSSSK
AENHIAVNTARGSSGGLQAPRGPRDEHSDFIANPTVWVSVPIAEGESDLDDLEDDGEEDA
QSSQQEVIPKGQQEQLQQVERCEDHLTPRSPGTGTSSEDLAPSLGETWKAESVPQAPAEG
VDDTSSSEGSTVDCPDPEEILRKIPELADDLEEPDDCFTEGCIRHCPCCKVDTTKSPWDV
GWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIF
VFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINYTDGE
FSLVPLSIVNNKSDCKIQNSTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DSREVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVET
DDQSEEKTKILGKINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVVLSIASLIFS
AILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMSSFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPY
CDPNLPNSNGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLS
EDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKSSYEPIATTLRWKQEDISATV
IQKAYRSYVLHRSMALSNTPCVPRAEEEAASLPDESFVPFTANENCVLPDKSETASATSF
PPSYESVTRGLSDRVNMRTSSSIQNEDEATSTEVIAPGP
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccattggatccctcgaaaataacaacttccgtcgctttactccggagtca
ctggtggagatagagaagcaaattgctgccaagcaggcaacaaagaaagccagagagaag
catagggagcagaaggaccaagaagagaaggctcggccccagctagacttgaaagcctgc
aaccagctgcccaagttctatggagagctcccagcagaactgatcggggagcccctggag
gatctagaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggctattcagtcctttcaacctgatcaga
agaacggccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattaca
gtcactattttggttaattgtgtgtgcatgacccgaactgaccttccagagaaaattgaa
tatgtcttcactgtcatttacacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcgcgtacctgagagatccttggaactggctggattttagcgtcatt
accctggcatatgttggcacagcaatagatctccgtgggatctcaggcctgcggacattc
agagttcttagagcattgaaaacagtttctgtgatcccaggcctgaaggtcattgtgggg
gccctgattcactcagtgaagaaactggctgatgtgaccatcctcaccatcttctgccta
agtgtttttgccttggtggggctgcaactcttcaagggcaacctcaaaaataaatgtgtc
aagaatgatatggctgtcaatgagacaaccaactactcatctcacagaaaacgagatatc
tacataaataagcgaggcacttctgatcccttactgtgtggcaatggatctgactcaggc
cactgccctgatggttatatctgccttaaaacttctgacaacccggattttaactacacc
agctttgattcctttgcttgggctttcctctcactgtttcgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatctatatgatctttttt
gtgctcgtaatcttcctgggatctttctacctggtcaacttgatcttggctgtagtcacc
atggcgtatgaggagcagaaccaggcaaccattgatgaaattgaagcaaaggagaagaag
ttccaggaggccctcgaaatactccagaaggagcaggaggtgctagcagcgctagggatt
gacacaacctctctccactcccacaacggatcacctttaaactccaaaaatgccagtgag
agaaggcatagattaaagccaacagtgtcagagggttccacagaagacaacaaatcaccc
cgctctgatccttacaaccagcgcaggatgtcttttctaggcctcacctctggaaaacgc
cgggctagtcatggcagcgtgttccatttctggtcccctggccgagatacctcactccct
gagggagtcacagatgatggagtctttcctggagaccacgaaagccattggggctccctg
ctgctgggtgggggtgctggccagcaaggccccttccctagaagccctcttcctcaaccc
agcaatcctgactccaggcatggagaagatgaacaccaaccgccacccactagtgagctt
gcccctggagctgtcgatgtctcggcattcgatgcaggacaaaagaagactttcttgtca
gcagaatacttagatgaacctttccgagcccaaagggcaatgagtgttgtcagtatcata
acctccgtccttgaggaactcgaggagtctgaacagaagtgcccactctgcttgaccagc
ttggctcagaagtatctgatctgggattgctgccccatgtggatgaagctcaagacaatt
ctctttgggcttgtgacggatccctttgcagagctcaccatcaccttgtgcatcgtggtg
aacacgatcttcatggccatggagcaccatggcatgagccctaccttcgaagccatgctc
cagataggcaacattgtctttaccatattttttactgctgaaatggtcttcaaaatcatt
gccttcgacccatactattatttccagaagaagtggaatatctttgactgcatcatcgtc
actgtgagtctgctagagctgggcgtggccaagaagggaagcctgtctgtgctgcggagc
ttccgcttgctgcgcgtcttcaagctggccaagtcctggcccaccttaaacacactcatt
aagatcatcggaaactcagtgggggcactggggaacctcaccatcatcctggccatcatt
gtctttgtctttgctctggttggcaagcagcttctaggggaaaactaccgtaacaaccga
aaaaatatctccgcgccccatgaagactggccccgctggcacatgcacgacttcttccac
tctttcctcattgtcttccgtatcctctgtggagagtggattgagaacatgtgggcctgc
atggaagtcggccaaaaatccgtatgcctcatccttttcttgacggtgatggtgctaggg
aacctggtggtgcttaacctgttcatcgccctgctattgaactctttcagtgctgacaac
ctcacagccccagaggacgatggggaggtgaacaacctgcaggtggccctggcacggatc
caggtctttggccatcgtaccaagcaggctctttgcagcttcttcagcaggccctgccca
ttcccccggcccaaggcagagcctgagctggtggtgaaactcccactctccagctccaaa
gctgagaaccacattgctgtcaacactgccagggggagctctggagggctccaagctccc
agaggccccagggatgagcacagtgacttcattgctaatcctactgtgtgggtctctgtg
cccattgctgagggtgaatctgatcttgatgacttggaggatgatggtgaggaagatgct
cagagctcccagcaggaagtgatccccaaaggacagcaggagcagctgcagcaagtcgag
aggtgtgaggaccacctgacacccaggagcccaggcactgggacatcttctgaggacctg
gctccatccctgggtgagacatggaaagctgagtctgttcctcaggcccctgccgaggga
gtggatgacacaagctcctctgagggcagcacggtggactgcccagatcctgaggagatc
ctgaggaagatccctgagctggcagatgacctagaagaaccagatgactgcttcacagaa
ggatgcattcgccactgtccctgctgcaaagtagataccaccaagagtccatgggatgtg
ggctggcaggtgcgcaagacttgctaccgtatcgtggagcacagctggtttgagagcttc
atcatcttcatgatcctgctcagcagtggatctctggcctttgaagactattacctggac
cagaagcccactgtgaaagctttgctggagtacactgacagggtcttcacctttatcttt
gtgttcgagatgctgcttaagtgggtggcctatggcttcaaaaagtacttcaccaatgcc
tggtgctggctggacttcctcattgtgaatatctcactgataagtctcacagcgaagatt
ctggaatattctgaagtggctcccatcaaagcccttcgaactcttcgcgctctgcggcca
ctgcgggctctgtctcgatttgaaggcatgcgggtggtggtggatgccctggtgggcgcc
atcccatccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatc
atgggcgtgaacctcttcgcagggaagttttggaggtgcatcaactataccgatggagag
ttttcccttgtacctttgtcgattgtgaataacaagtctgactgcaagattcaaaactcc
accggcagcttcttctgggtcaatgtgaaagtcaactttgataatgttgcaatgggttac
cttgcacttctacaggtggcaacctttaaaggctggatggacattatgtatgcagctgtt
gattcccgggaggtcaacatgcaacccaagtgggaggacaacgtgtacatgtatttgtac
tttgtcatcttcatcattttcggaggcttcttcacactgaatctctttgttggggtcata
attgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatgacagag
gagcagaagaagtactacaatgccatgaagaaactgggctccaagaagccccagaagccc
atcccacggcccctgaacaagttccagggttttgtctttgacatcgtgaccagacaagct
tttgacatcaccatcatggtcctcatctgcctcaacatgatcaccatgatggtggagact
gatgaccagagtgaagaaaagacaaaaattctgggcaaaatcaaccagttctttgtggcc
gtcttcacaggcgaatgtgtcatgaagatgttcgctttgaggcagtactacttcaccaat
ggctggaatgtgtttgacttcattgtcgtggttctctccattgcgagcctgattttttct
gcaattcttaagtcacttcaaagttacttctccccgacgctcttcagagtcatccgcctg
gcccgaattggccgcatcctcagactgatccgagcggccaaggggatccgcacactgctc
tttgccctcatgatgtccctgcctgccctcttcaacatcgggctgctgctcttccttgtc
atgttcatctactccatcttcggtatgtccagctttccccatgtgaggtgggaggctggc
atcgacgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatc
accacgtcggccggctgggatggcctcctcagccccatcctcaacacagggcccccctac
tgtgaccccaatctgcccaacagcaatggcaccagaggggactgtgggagcccagccgta
ggcatcatcttcttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtac
attgcagtgattctggagaacttcaatgtggccacggaggagagcaccgagcccctgagt
gaggatgactttgacatgttctatgagacctgggagaagtttgacccagaggccactcag
tttattaccttttctgctctctcggactttgcagacactctctctggtcccctgagaatc
ccaaaacccaatcgaaatatactgatccagatggacctgcctttggttcctggagataag
atccactgcttggacatcctttttgctttcaccaagaatgtcctaggagaatccggggag
ttggattctctgaaggcaaatatggaggagaagtttatggcaactaatctttcaaaatca
tcctatgaaccaatagcaaccactctccgatggaagcaagaagacatttcagccactgtc
attcaaaaggcctatcggagctatgtgctgcaccgctccatggcactctctaacacccca
tgtgtgcccagagctgaggaggaggctgcatcactcccagatgaaagttttgttccattc
acagcaaatgaaaattgtgtactcccagacaaatctgaaactgcatctgccacatcattc
ccaccatcctatgagagtgtcactagaggccttagtgatagagtcaacatgaggacatca
agctcaatacaaaatgaagatgaagccaccagtacagaggtgattgcccctgggccctag
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