Pongo pygmaeus (Bornean orangutan): 129033321 Help Entry 129033321         CDS       T10128                                  Symbol COL7A1 Name (RefSeq) collagen alpha-1(VII) chain   KO K16628   collagen type VII alpha Organism ppyg  Pongo pygmaeus (Bornean orangutan) Pathway ppyg04382   Cornified envelope formation ppyg04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:ppyg00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     129033321 (COL7A1)   09158 Development and regeneration    04382 Cornified envelope formation     129033321 (COL7A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen fn3 VWA Pur_ac_phosph_N VWA_2 Kunitz_BPTI Ig_DSCAM-DSCAML_C DUF4992 Motif Other DBs NCBI-GeneID:  129033321 NCBI-ProteinID:  XP_054337580 LinkDB All DBs Position 2:105027930..105059100 Genome browser AA seq 2944 aa AA seqDB search MTLRLLVAALCAWILAGAPRVRAQHRERVTCTRLYAADIVFLLDGSSSIGRSNFREVRSF LEGLVLPFSGAASAQGVRFATVQYSDDPRTEFGLDALGSGGDVIRAIRELSYKGGNTRTG AAILHVADRVFLPQLARPGVPKVCILITDGKSQDLVDTAAQRLKGQGIKLFAVGIKNADP EELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTRPPDDSTSAPRDLVL SEPSSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERQEVNVPAGETSVRLQGLQPL TEYQVTVIALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLVAWRSVPGATGYRVTW RVLSGGPTQQQELGPGQGSVLLHDLEPGTEYEVTVRTLFGQSMGPATSLTAHTDTSVEQT LHPVILGPTSILLSWNLVPEARGYRLEWRRETGLEPPQKVVLPSVVTRYQLDGLQPGTEY RLTLYTLLEGREVATPATVVPTGPELPVSPVTDLQATELPGQRVRVSWSPVPGATQYRII VRSTQGVERTLVLPGSQTAFDLDDVQAGLSYTVRVSARVGPREGSASMLTVRREPETPLA VPGLRVVVSDATRVRVAWGPVPGASGFRISWSTGSGPESSQTLPPDSTATDITGLQPGTT YQVAVSVLRGRKEGPAAVIVARTDPLGPVRTVHVTQAGSSSVTITWTRVPGATGYRVSWH SAHGPEKSQLVSGEATVAELDGLEPDTEYMVHVRAHVAGVDGPPASVVVRTAPEPVGRVS RLQILNASSDVLRITWVGVTGATAYRLAWGRSEGGPMRHQILPGNTDSAEIRGLEGGVSY SVRVTALVGDREGTPVSIVVTTPPEAPPALGTLHVVQRGEHSLRLRWEPVPRAQGFLLHW QPEGGQEQSRVLGPELSSYHLDGLEPATQYHVKLSVLGPAGEGPSAEVTARTESPRVPST ELRVVDTSIDSVTLAWTPVSRASSYILSWRPLRGPGQEVPGSPQTLPGISSSQRVTGLEP GVSYIFSLTPVLDGVRGPEASVTQTPVCPRGLADVVFLPHATQDNAHRAEATRRVLERLV SALGPLGPQAVQVGLLSYSHRPSPLFPLNGSHDLGIILQRIRDMPYMDPSGNNLGTAVVT AYRYVLAPDAPGRRQHVPGVMVLLVDEPLRGDIFSPIREAQAAGLNVVMLGMAGADPEQL RRLAPGMDSVQTFFAVDDGPSLDQAVSGLAAALCQASFATQPRPEPCPVYCPKGQKGEPG EMGLRGQVGPSGDPGLPGRTGAPGPQGPPGSAIAKGERGFPGADGRPGSPGRPGNPGTPG APGLKGSPGLPGPRGDPGEQGPRGPKGEQGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRG PLGDPGPRGPPGLPGTAVKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGP PGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFSGPLGEAGEKGERGPP GPAGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVG PAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGR PGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGE DGRNGIPGPSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPG APGERGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAPGPSGPNGAAG KAGDPGRDGLPGLRGEQGPPGPSGPPGLLGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKG DSGAPGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGY KGEQGLPGERGLRGEPGSMPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGP KGDSGERGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPG IPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPG PGLSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGV AGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLP GPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSP GLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGLRGE KGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGIGVPGSPGPPGPPGVKGDLGVPGPPGAP GVVGFQGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGDK GDPGAGLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDKG DSAVILGPPGPRGAKGDMGERGLRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGSPGLR GLPGPQGQPGAAGIPGDPGSPGKDGVSGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEK GDKGEAGPPGRPGLAGHKGEMGEPGVPGQLGAPGKEGLIGPKGDRGFDGQPGAKGDQGEK GERGTPGIGGFPGPSGNDGSAGPPGPPGNVGPRGPEGLQGQKGERGPPGERVVGAPGAPG APGERGEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYA ADTARSQLHAVPVLRVSHAEEEERVPPEDDEYSEYSEYSVEEYQDPETPWDSDDPCSLPL DEGSCTAYTLRWYHRAVTGGTEACHPFVYGGCGGNANRFGTREACERRCPPRVAQSQGTG TAQD NT seq 8835 nt NT seq  +upstreamnt  +downstreamnt atgacgctgcggcttctggtggccgcgctctgcgcctggatcctggcaggggcgccccga gtgcgagcccagcacagggagagagtgacctgcacgcgcctttacgccgctgacattgtg ttcttactggatggctcctcatccattggccgcagcaatttccgcgaggtccgcagcttt ctcgaagggctggtgctgcctttctctggagcagccagtgcacagggtgtgcgctttgcc acagtgcagtacagcgacgacccacggacagagttcggcctggatgcacttggctctggg ggtgatgtgatccgcgccatccgtgagctcagctacaaggggggcaacactcgcacaggg gctgcaattctccatgtggctgaccgtgtcttcctgccccagctggcccgacctggcgtc cccaaggtctgcatcctgatcacagatgggaagtcccaggacctggtggacacagctgct caaaggctgaaggggcaggggatcaagctatttgctgtggggatcaagaatgctgaccct gaggagctgaagcgagttgcctcacagcccaccagtgacttcttcttcttcgtcaacgac ttcagcatcttgaggacactactgcccctcgtttcccggagagtgtgcacgactgctggt ggcgtgcctgtgacccggcctccggatgactcgacctctgctccacgagacctggtgctg tctgagccaagcagccaatccttgagagtacagtggacagcagccagtggccctgtgact ggctacaaggtccagtacactcctctgacggggctgggacagccactgccgagtgagcgg caggaggtgaacgtcccagctggtgagaccagcgtgcggctgcagggtctccagccactg accgagtaccaagtgactgtgattgccctctacgccaacagcattggggaggccgtgagc gggacagctcggaccactgccctggaggggccggaactgaccatccagaataccacagcc cacagcctcctggtggcctggcggagtgtgccaggtgccactggctaccgtgtgacatgg cgggtcctcagtggtgggcccacacagcagcaggagctgggccctgggcagggttcagtg ttgctgcatgacttggagcctggcacggagtatgaggtgaccgtgagaaccctatttggc cagagcatggggcccgccacttccctgacagctcacactgacacttctgttgagcagacc ctgcacccggtcatcctgggccccacatccatcctcctttcctggaacttggtgcctgag gcccgtggctaccggttggaatggcggcgtgagactggcttggagccaccgcagaaggtg gtgctgccctctgttgtgacccgctaccagttggatgggctgcagccgggcactgagtac cgcctcacactctacactctgctggagggccgcgaggtggccacccctgcaaccgtggtt cccactggaccagagctgcctgtgagccctgtaacggacctgcaagccaccgagctgccc gggcagcgggtgcgagtgtcctggagcccagtccctggtgccacccagtaccgcatcatt gtgcgcagcacccagggggttgagcggaccctggtgcttcctgggagtcagacagcgttc gacttggatgacgttcaggctgggcttagctacactgtgcgggtgtctgctcgagtgggt ccccgtgagggcagtgccagtatgctcactgtccgccgggagccggaaaccccacttgct gttccagggctgcgagttgtggtgtcagatgcaacacgagtgagggtggcctggggaccc gtccctggagccagtggatttcggattagctggagcacaggcagtggtccagagtccagc cagacactgcccccagactctactgccacagacatcacagggctgcagcctggaaccacc taccaggtggctgtgtcggtactgcgaggcagaaaggagggccctgctgcagtcatcgtg gctcgaacggacccactgggcccagtgaggacggtccatgtgactcaggccggcagctca tctgtcaccattacttggaccagggttcctggcgccacaggatacagggtttcctggcac tcagcccacggcccagagaaatcccagttggtttctggggaggccacggtggctgagctg gatggactggagccagatactgagtatatggtgcatgtaagggcccatgtggctggcgtg gatgggccccctgcctctgtggttgtgaggactgcccctgagcctgtgggtcgtgtgtcg aggctgcagatcctcaacgcttccagcgacgttctacggatcacttgggtaggggtcact ggagccacagcttacagactggcctggggccggagtgaaggtggccccatgagacaccag atactcccaggaaacacagactctgcagagatccggggtctcgaaggtggagtcagctac tcagtgcgagtgactgcacttgtcggggaccgcgagggcacacctgtctccattgtcgtc accacaccgcctgaggctccgccagccctggggacgcttcacgtggtgcagcgtggggag cactcactgaggctgcgctgggagccggtgcccagagcacagggcttccttctgcactgg caacctgagggtggccaggaacagtcccgggtcctggggcccgagctcagcagctatcac ctggatgggctggagccagcgacacagtaccacgtgaagctgagtgtcctagggccggct ggagaagggccctctgcagaggtgactgcgcgcactgagtcacctcgtgttccaagcact gaactacgtgtggtggacacctcgatcgactcggtgactttggcctggaccccagtgtcc agggcatccagctacatcctatcctggaggccactcagaggccctggccaggaagtgcct gggtccccgcagacacttccagggatctcaagctcccagcgggtaacagggctagagcct ggcgtctcttacatcttctccctgacgcctgtcctggatggtgtgcggggtcctgaggca tctgtcacacagacaccagtgtgtccccgtggcctggcggatgtggtgttcctaccacat gccactcaagacaatgctcaccgtgcggaggctacgaggagggtcctggagcgtctggtg tcggcacttgggcctcttgggccacaggcagttcaggttggcctgctgtcttacagtcat cggccctccccactgttcccactgaatggctcccatgaccttggcattatcttgcaaagg atccgtgacatgccctacatggacccaagtgggaacaacctgggcacagccgtggtcaca gcttacagatacgtgttggcaccagatgctcctgggcgccgccagcatgtaccaggggtc atggttctgctagtggatgaacccttgagaggtgacatattcagccccatccgtgaggcc caggctgctgggcttaatgtggtgatgttgggaatggctggagcggacccagagcagctg cgtcgcttggcgccgggtatggactctgtccagaccttcttcgccgtggatgatgggcca agcctggaccaggcagtcagtggtctggccgcagccttgtgtcaggcatccttcgctact cagccccggccagagccctgcccagtgtattgtccaaagggccagaagggggaacctgga gagatgggcctgagaggacaagttgggccttctggtgaccctggcctcccgggcaggacc ggtgctcccggcccccaggggccccctggaagtgccattgctaagggtgagaggggcttc cctggagcagatgggcgtccaggcagccccggccgccccgggaatcctgggacccctgga gcccctggcctaaagggctctccagggttgcctggccctcgtggggacccgggagagcaa ggacctcgaggcccaaagggggagcagggggctcccggacaagtcatcggaggtgaagga cctgggcttcctgggcggaaaggggaccctggaccatcgggcccccctggacctcgtgga ccattgggggacccaggaccccgtggccccccaggacttcctggaacagccgtgaagggt gacaaaggcgatcgtggggagcggggtccccctggaccaggtgaaggtggcattgctcct ggggagcccgggctgccgggtcttcctggaagccctggaccccaaggccccgttggcccc cctggaaagaaaggagaaaaaggtgactctgaggatggagctccaggcctcccaggacaa cctgggtctccgggtgagcagggcccacggggacctcctggagctattggccccaaaggt gaccggggcttttcagggcccctgggtgaggctggagagaagggtgaacgtggaccccca ggcccagcgggatcccgggggctgccaggggttgctggacgtcctggagctgagggtcct gaagggccaccaggacccactggccgccaaggagagaagggggagcctggtcgccctggg gaccctgcagtggtgggacctgctgttgctggacccaaaggagaaaagggagatgtgggg cccgctgggcccagaggagctaccggagtccaaggggaacggggcccacccggcttggtt cttcctggagaccctggccccaagggagaccctggagaccggggtcccattggccttact ggcagagcaggacccccaggtgactcagggcctcctggagagaagggagaccctgggcgg cctggccccccaggacctgttggcccccgaggacgagatggtgaagttggagagaaaggt gacgagggtcctccgggtgacccgggtttgcctggaaaagcaggcgagcgtggccttcgg ggggcacctggagttcgggggcctgtgggtgaaaagggagaccagggagatcctggagag gatggacgaaatggcatccctggaccatctggacccaagggtgaccgtggggagccgggt cccccaggacccccgggacggctggtagacacaggacctggagccagagagaagggagag cctggagaccgcggacaagagggtccccgagggcccaagggtgaccctggcctgcctgga gcccctggggaaaggggcattgatgggcttcgggggcccccaggcccacagggggaccca ggtgtccgaggcccagcaggagaaaagggtgaccggggtcccccggggctggatggccgg agcggactggatgggaaaccaggagcccccgggccctctgggccgaatggtgctgcaggc aaagccggggacccagggagagacgggcttccaggcctccgtggagaacagggcccccct ggcccttctggtccccctggattactgggaaagccaggcgaggatggcaaacctggcctg aatggaaaaaacggagaacctggggaccctggagaagacgggaggaagggagagaaagga gattcaggtgcccctgggagagaaggtcgtgatggccccaagggtgagcgtggagctcct ggcatccttggaccccaggggcctccaggcctcccagggccagtgggccctcctggccag ggttttcctggtgtcccaggaggcacaggccccaagggtgaccgtggggagactggatac aaaggggagcagggcctccctggagagcgtggcctgcgaggagagcctggaagcatgccg aatgtggatcggttgctggaaactgctggcatcaaggcgtctgccctgcgggagatcgtg gagacctgggatgagagctctggtagcttcctgcctgtgcctgaacggcgtcgaggcccc aagggggactcgggtgaacggggtcccccaggcaaggagggccccatcggctttcctgga gaacgtgggctgaagggcgaccgtggagaccctggccctcaggggccacctggcctggcc cttggggagaggggcccccctggacctcccggccttgccggggagcctggaaagcctggt attcccgggctcccaggcagggctgggggtgtgggagaggcaggaaggccaggagagagg ggagaacggggagagaaaggagaacgtggagaacagggcagagatggccctcctggcctc cctggaacccctgggccccctggaccccctggccccaaggtgtctgtggatgagccaggt cctggactctctggagaacagggaccccctggactcaagggtgctaagggggagccgggc agcgatggtgaccgaggtcccaaaggagataggggtgtgccaggcatcaaaggagaccgg ggagagcctggaccgaggggtcaggatggcaacccgggtctaccaggagagcgtggtgtg gctgggcctgaaggcaagccgggtctgcagggtccaagaggcccccctggcccagtgggt ggtcatggagatcctggaccacctggtgccccgggtcttgctggccctgcaggaccccag ggaccttctggcctgaagggggagcctggagagacaggacctccaggacggggcctgcct ggacctactggagctgtgggacttcctggtccccccggcccttcaggccttgtgggtcca caggggtctccaggtttgcctggacaagtgggggagacagggaagccaggagccccaggt cgagatggtgccagtggaaaagatggagacagagggagccctggtgtgccagggtcacca ggtctgcccggccctgtaggacctaaaggagaacctggccccacgggggcccctggacag gctgtggtcgggctccctggagcaaagggagagaagggagcccctggaggccttgctgga gacctggtgggtgagccgggagccaaaggtgaccgaggactgccagggctgcgaggcgag aagggtgaagctggacgtgcaggggagcccggagaccctggggaagatggtcagaaaggg gctccaggacccaaaggtttcaagggtgacccaggaatcggggtcccgggctcccctggg cctcctggccctccaggtgtgaagggagatctgggcgtccctggcccccccggtgctcct ggtgttgttgggttccagggtcagacaggccctcgaggagagatgggtcagccaggccct agtggagagcggggtctggcaggccccccagggagagaaggagtcccaggccccttgggg ccacctggaccaccggggtcagtgggaccacctggggcctctggactcaaaggagacaag ggagaccctggagcagggctgcccgggccccgaggcgagcgtggggagccaggcgtccgg ggtgaagatggccgccccggccaggagggaccccgaggactcacggggccccctggcagc aggggagagcgtggggagaagggtgacgttgggactgcaggactaaagggtgacaaggga gactcggccgtgatcctggggcctccagggccacggggtgccaagggggacatgggtgaa cgagggcttcggggcttggatggtgacaaaggacctcggggagacaatggggaccctggt gacaagggcagcaagggagagcctggtgacaagggctcagccgggtcgccaggactgcgt ggactcccgggaccccagggtcaacctggtgcagcagggatccctggtgacccgggatcc ccaggaaaggatggagtgtctggtatccgaggagaaaaaggagatgttggcttcatgggt ccccggggcctcaagggtgaacggggagtgaagggagcctgtggccttgatggagagaag ggagacaagggagaagctggtcccccaggccgccccgggctggcaggacataaaggagag atgggggagcctggtgtgccgggccagttgggggcccctggcaaggagggcctgatcggt cccaagggtgaccgaggctttgatgggcagccaggcgccaagggtgaccagggcgagaaa ggggagcggggaaccccaggaattgggggcttcccaggccccagtggaaatgatggctcc gctggtcccccggggccacctggcaatgttggtcccagaggccctgaaggacttcagggc cagaagggtgagcgaggtccccctggagagagagtggtgggggctcctggggcccctgga gctcctggagagagaggggagcaggggcggccagggcctgccggccctcgaggcgagaag ggagaagctgcactgacggaggatgacatccggggctttgtgcgccaagagatgagtcag cactgcgcttgccagggtcagttcatcgcatctggatcacgacccctccctagttatgct gcagacactgcccgctcccagctccatgctgtgcctgtgctccgcgtctctcacgcagag gaggaagagcgggtgccccctgaggatgatgagtactctgaatactccgagtattccgtg gaggagtaccaggaccctgaaaccccttgggatagtgatgacccctgttccctgccgctg gatgagggctcctgcactgcctacaccctgcgctggtaccatcgggctgtgacaggtggc acagaggcctgtcacccttttgtctatggcggctgtggagggaatgccaaccgttttggg acccgtgaggcctgcgaacgccgctgcccaccccgggtggcccagagccaggggacaggt actgcccaggactga

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