Pongo pygmaeus (Bornean orangutan): 129033686
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Entry
129033686 CDS
T10128
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
Enzymes [BR:
ppyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
129033686 (TARBP1)
Transfer RNA biogenesis [BR:
ppyg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129033686 (TARBP1)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129033686 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129033686
NCBI-ProteinID:
XP_054338564
LinkDB
All DBs
Position
1:14790613..14881298
Genome browser
AA seq
1621 aa
AA seq
DB search
MEWVLAEALLSQSRDPRALLGALCQGEASAERVETLRFLLQRLEDEEARGSGGAGALPEA
AREVAAGYLVPLLRSLRRRPEGGPDPSLQPRHRRRVLRAAGAALHSCVRLAGRPQLAAAL
AEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPRDDGPLLERVAGAAVALALGGGGDGDE
AGPAEDAAALVAGRLLPVLVQCGGAALWAVWGGLAAPGVSPGSGRVEEKLLVLSALAEKL
LPEPGGDRARGAREAGPDARRCWRFWRTVQAGLGQADALTRKRARYLLQRAVEVSAELGA
DCTCGPQEGNGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKVNNLFEY
AVSEENGCWLFHSSWHMCIYKRMFESENKILTKEGVIHFLELYETKILPFSPEFSEFIIG
PLMDALSESSLYSRSPGQPIGSCSPLGLKLQKFLVTYISLLPEEIKSSFLLKFIRKMTSR
HWCAVPILFLSKALANVPRYKALGIDGLLALRDVIHCTMITHQILLRGAAQCYLLQTAMN
LLDVEKVSLSDVSTFLMSLRQEESLGRGTSLWTELCDWLRVNESYFKPSPTCSSIGLHKT
SLNAYVKSLVQEYVKSSAWETGENCFMPDWFEAKLVSLMVLLAVDVEGMKTQYGGKQRTE
NVLRIFLDPLLDVLMKFGTNAYMPLLKTDRCLQLLLKLLNTCRLKGSSAQDDEVSTVLQN
FVMSTTESISEFILRRLTMNELNSVSDLDRCHLYLMVLTELINLHLKVGWKRGNPIWRVI
SLLKNASIQHLQEMDSGQEPTLGSQIQRVVSMAALAMVCEAIDQKPELQLDSLHAGPLES
FLSSLQLNQTLQKPHAEEQSSYAHPSECSSVLEESSSSQGWGKIVAQYIHDQWVCLSFLL
KKYHTLIPTTGSEILEPFLPSVQMPIRTLQSALEALTVLSSDQVLPVFHCLKVLVPKLLT
SSESLCIESFDMAWKIISSLSNTQLIFWPNLKAFVQFVFDNKVLTIAAKIKGQAYFKIKE
IMYKIIEMSAIKTGVFNTLISYCCQSWIVSASNVSQGSLSSAKNYSELILEACIFGTVFR
RDQRLVQDVQTFIENLGHDCAANIVMENTKREDHYVRICAIKFLCLLDGSNMSHKLFMED
LAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGIIDRIFQAGF
TNNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEENLKTSICTFLAVLSHLDIITQN
IPEKKLILKQALIVVLQWCFNHNFSVRLYALVALKKLWTVCKVLSVEEFDALTPVIESSL
HQVESMHGAGNAKKNWQRIQEHFFFATFHPLEDYCLETIFYILPRLSGLIEDEWITIDKF
TRFTDVPLDAGFQWYLSQTQLSKLKPGDWSQQDIGSNLVEADNQAEWTDVQKKIIPWNSR
VPDLDLELLFQDRAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVIGSLQCI
SDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEK
SLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLSHGDNK
P
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggtgctcgcggaagcgctgctctcgcagagccgggatccccgggccctgctt
ggggcgctgtgccaaggggaggcatccgcggagcgcgtggagacgctgcgcttccttctg
cagcggctcgaggacgaggaggcgcgcgggagcgggggcgcaggcgcgctcccggaggcg
gcgcgcgaggtggctgcagggtacctcgtgccactgctgcggagcctgcgccgacgcccc
gagggcggcccggaccccagtctacagcctcgccaccgccggcgcgtgctgagggcggcg
ggcgcggccctgcattcgtgcgtccgcctggccgggcgtccgcagctggcggccgcgctg
gctgaggaggcgctgcgcgatctgctcgccgggtggcgcgcgcctggcgccgaggctgcc
gtggaagtgctcgcagccgtcgggccctgtttgcggccccgcgacgacgggccgctgctg
gagcgcgtggcgggggccgccgtcgccttggcgctgggcgggggcggggacggggatgag
gccgggcctgccgaggacgcggcggcgctggtggccgggcgactgctgccagtgctggtc
caatgcggcggggcggcgctgtgggccgtgtggggcgggctggccgcgcccggggtgtcc
ccggggtccggccgcgtagaggagaagctgttggtcctgagcgccctggccgagaagctg
ctgcccgagcccggcggcgaccgcgcccgcggcgcgcgcgaggcgggcccggacgcccgg
cgctgctggcgcttctggaggacggtgcaggcggggctgggccaggcggacgccctgacg
cgcaagcgagcgcgctacctgctgcagagggcggtagaggtatcggcggagctgggggcc
gactgcacctgcgggccccaggaaggaaacggcccaagtctgttttggtggtctgagaag
aaaaaagatgagcttctaaagttttgggaaaattatattttaattatggagactttagaa
ggaaatcagatacatgttataaagccagttttaccaaaggtaaacaatctgtttgaatat
gcggtgtcagaggaaaacggatgttggctctttcactcatcctggcatatgtgtatttat
aaaagaatgtttgaaagtgaaaacaaaatcctgaccaaagaaggtgttatccattttttg
gagctgtatgaaacaaagattcttccattttcaccagaattttctgagtttattattgga
ccattaatggatgcactttcagagagctctctgtatagcaggtccccaggccagccgata
ggaagctgttctccattgggactgaaattacagaagtttttagtcacttatatttctctt
cttccagaagaaataaagagtagcttcctattgaagtttattcggaagatgacaagtagg
cattggtgtgctgttcccattttgtttctatctaaggctttggcaaatgtcccaagatat
aaggccctgggtatagatgggcttcttgctctcagggatgttattcattgcactatgatc
acacatcagattctcctgagaggggcagcccaatgctaccttcttcaaacagctatgaat
ttgctagatgtggagaaagtgtcactttctgatgtctcaacttttctcatgtctctgaga
caagaggaatccttaggacgaggaacttcattgtggacagagctgtgtgactggctacgt
gttaatgaaagctattttaagccatccccaacgtgtagctccattggacttcacaagaca
tctttaaatgcttatgtgaagagccttgttcaagagtatgttaagtcatctgcttgggaa
acaggagaaaactgctttatgcctgattggtttgaagccaagcttgtttctctgatggtc
ttgctggctgtggatgtggaaggaatgaagactcaatatggcggaaagcagagaacagag
aatgtattgcggatattcttagaccctcttctggatgtgcttatgaagtttggtaccaat
gcctacatgcccttgctgaagactgacagatgccttcagttgctgttgaagctgttgaac
acatgcaggttgaaaggttctagtgcccaagatgatgaggtgtctactgttcttcagaac
tttgtcatgtctactacagagagcatttctgaatttattctcagaagacttactatgaat
gagctaaatagtgtttcagatctggaccgttgccatttatacctgatggtgttaactgag
cttataaatctgcatttgaaggttgggtggaaaaggggtaaccctatttggagagttatt
tctcttttgaaaaatgcgtccattcagcatcttcaagagatggacagtggacaggagcca
acacttggaagtcagattcagagagtggtgagcatggctgccttggccatggtgtgtgaa
gccatagaccagaagcctgagctgcagctggactctctccatgctgggcccctggaaagc
ttcctttcctctcttcagctcaatcagacgctgcagaagccccacgcagaggagcagagc
agttatgctcacccctcggagtgcagcagtgttttggaagaatcgtcatcttcccaagga
tggggaaaaatagttgcacaatatattcatgatcaatgggtgtgcctctctttcctgttg
aaaaaatatcacacccttataccaaccaccgggagtgaaattctggaaccgtttctacct
tccgttcaaatgccaataaggactttgcagtctgcactagaagccctcacagttctttct
tctgatcaagttttaccagtgttccattgcttgaaagtgttggttcccaagcttctgact
tcctctgaatcactctgcatagagtcttttgacatggcttggaaaattatatcttcttta
agcaacactcagctgatattctggcctaatttaaaagcttttgttcagtttgtttttgat
aacaaagttcttaccattgctgccaaaatcaagggccaggcatatttcaaaataaaagag
attatgtacaagataattgaaatgtctgccataaagactggagtcttcaatacactgata
agttactgctgtcagtcttggatagtgtctgcttcaaatgtgtcccaaggatctttatca
agtgctaaaaattatagcgaacttatccttgaggcttgtatatttggaactgtgtttagg
cgtgatcaaagacttgttcaggatgtacagaccttcatagaaaaccttggacatgactgt
gcggcaaatattgttatggaaaatactaagagagaagaccattatgtgagaatttgtgct
atcaaattcctgtgtttattagatggctccaatatgtcccacaagttgtttatggaggat
cttgcaatcaagctattagataaagatgaattagtgtccaagtccaaaaaacgctactat
gtgaattctctacaacacagagtgaaaaaccgagtgtggcagactctgctggtacttttc
cctagacttgatcagaatttcttgaatggaattattgacaggattttccaggctggtttc
accaacaatcaagcatccataaaatattttatagaatggattattatattgattcttcat
aaattccctcagtttcttccaaagttctgggattgtttttcttatggtgaagaaaatctt
aaaacaagcatttgtacatttttagcagttttatcacatttggacattattactcaaaat
attccagaaaagaaactaattctgaagcaagcccttattgttgtgctgcagtggtgtttc
aatcacaattttagtgttcgactgtatgctttagttgctcttaagaaactctggactgtg
tgtaaagtgttaagtgttgaagaatttgatgccctgactcctgtgattgaatccagcctc
catcaagtggaaagcatgcacggagcagggaatgccaagaagaattggcaacgcattcaa
gagcatttcttttttgcaacatttcacccactcgaggattactgtctagagaccatattt
tacatccttccacgcctttcaggccttattgaagatgagtggatcaccattgataaattt
accagattcactgatgttcctttagatgcgggatttcagtggtacctttctcaaactcaa
cttagtaaactaaaaccaggtgactggtctcagcaagacataggtagtaatttggtcgaa
gcagataaccaagcggagtggaccgatgttcagaagaagattatcccgtggaacagtcgt
gttcctgacttagacctggagctcctgtttcaggatcgtgctgccagacttggaaagtca
attagtagactcatcgtcgtggcctcgctcattgacaaaccgaccaatttaggaggactg
tgcaggacctgtgaggtatttggggcttcagtgctcgttattggcagccttcagtgtatc
agcgacaaacagtttcagcacctcagtgtctctgcagaacagtggcttcctctagtggag
gtaaaaccacctcagctaattgattatctgcagcagaagaaaacagaaggttataccatc
attggagtggaacaaactgccaaaagtttagacttaacccaatattgctttcctgagaaa
tctctactcttgttgggaaatgaacgtgagggaattccagcaaatctgatccagcagttg
gacgtttgtgtggaaattcctcaacagggcattatccgttccctgaacgtccacgtgagt
ggagccctgctgatctgggagtacaccaggcagcagctgctctcacacggagataacaag
ccatga
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integrated database retrieval system
