Pongo pygmaeus (Bornean orangutan): 129033719
Help
Entry
129033719 CDS
T10128
Name
(RefSeq) WD repeat-containing protein 82-like
KO
K14962
COMPASS component SWD2
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129033719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129033719
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129033719
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129033719
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
129033719
COMPASS/SET1 complex (yeast)
129033719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_EIPR1
RMC1_N
WD_LRWD1
SMN_Tudor
VPS8_N
MinC_C
DUF7099
Motif
Other DBs
NCBI-GeneID:
129033719
NCBI-ProteinID:
XP_054338633
LinkDB
All DBs
Position
2:4086825..4089737
Genome browser
AA seq
315 aa
AA seq
DB search
MKLTDSVLRSFRVARVFCENSDKINCFDFSPNGQTVISSSNDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHEANTAVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
IFISGSLDKTIRLWDLRAPNCQGLMHLQGKPVCSFDPEGLILAAGVKSEMVKLYDLRSFD
KGPFTTFKMQCNRTCEWTGLKFSNDGKVILISTNGSFISLIDAFKGVVMHTFEGYANSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGKSGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMVFWLPTIDDSP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaccgacagcgtgttgcggagcttccgcgtcgccagggtgttctgcgaaaac
tcggacaagattaactgcttcgatttcagccccaacggccagacggtcatctcaagcagc
aacgacgactccatcgtgctctatgactgccaggagggcaaaccaaagagaactctgtac
agtaagaaatacggcgtggacctcatcagatacactcatgaggcaaacacagctgtttac
agctctaacaaaatagacgacactattcgttacttgtccttgcatgacaacaaatacatc
agatactttcctggacatagcaaaagggtggtggccttgtccatgtcacctgtggatgac
attttcatttctgggtctcttgataagaccattcgactctgggatctccgggctcctaac
tgccagggcctcatgcatctacaggggaagccagtttgttcttttgatccagaagggtta
attttggctgcaggtgtcaagtctgagatggtcaaactttacgaccttcgttcttttgat
aaggggccatttactacctttaagatgcagtgtaatcgaacttgtgaatggacaggactt
aaattcagcaacgatggcaaggtcatcctcatttccaccaatggcagcttcatttctctc
attgatgcgttcaaaggagtggtgatgcacacgtttgagggttatgccaacagcaaagct
gtcacactggaggcttcatttactccagactctcagtttattatgattggttcagaggat
ggcaagatccatgtctggaatggaaagagtggtataaaagtagctgtgttggatggtaaa
cacaccggcccaattacgtgtttgcaattcaaccccaagttcatgacttttgccagcgcg
tgttccaacatggtcttctggctgcccaccattgatgactcaccctga
DBGET
integrated database retrieval system
