KEGG   Pongo pygmaeus (Bornean orangutan): 129034263
Entry
129034263         CDS       T10128                                 
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
  KO
K11757  protein polybromo-1
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03082  ATP-dependent chromatin remodeling
ppyg05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129034263 (PBRM1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    129034263 (PBRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppyg03021]
    129034263 (PBRM1)
   03036 Chromosome and associated proteins [BR:ppyg03036]
    129034263 (PBRM1)
Transcription machinery [BR:ppyg03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     129034263 (PBRM1)
Chromosome and associated proteins [BR:ppyg03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    129034263 (PBRM1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 129034263
NCBI-ProteinID: XP_054339880
LinkDB
Position
2:100840960..100985252
AA seq 1725 aa
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPTYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTHDS
EMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILE
PMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKE
LGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIF
LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL
IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL
AEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYED
AVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEE
KREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW
EDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYF
KLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANA
DKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSNGEPGCHYFEQLHYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETC
PMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQ
LQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDY
SFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALM
GVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLP
PGVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPPGPP
VIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDIHLSKEQ
ESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENI
NT seq 5178 nt   +upstreamnt  +downstreamnt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat
tccatgggttccaagagaagaagagctacctccccttccagcagtgtcagcggggacttt
gatgatgggcaccattctgtgtcaacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccaaccgtagatcctattgccgtgtgccatgaactctataataccatccgagac
tataaggatgaacagggcagacttctctgtgagctcttcattagggcaccaaagcgaaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacag
aaactaaaaatggaagagtatgatgatgttaatttgctgactgctgacttccagcttctt
tttaacaacgcaaaggcctattacaagccagattctcctgaatataaagccgcttgcaaa
ctctgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgac
gaagatgatgatgaagatgggcaagacaatcagggcacagtgactgaaggatcttctcca
acttacttgaaggagatcctggagcagcttcttgaagccatagttgtagctacaaatcca
tcaggacgtctcattagcgaactttttcagaaactgccttctaaagtgcaatatccagat
tattatgcaataattaaggagcctatagatctcaagaccattgcccagaggatacagaat
ggaagctacaaaagtattcatgcaatggccaaagatatagatctcctcgcaaaaaatgcc
aaaacttataatgagcctggctctcaagtattcaaggatgcaaattcaattaaaaaaata
ttttatatgaaaaaggctgaaattgaacatcatgaaatggctaagtcaagtcttcgaatg
aggactccatccaacttggctgcagccagactgacaggtccttcacacagtaaaggcagc
cttggtgaagagagaaatcccactagcaagtattaccgtaataaaagagcagtacaagga
ggtcgtttatcagcaattacaatggcacttcaatatggctcagaaagtgaagaagatgct
gctttagctgctgcacgttatgaagagggagagtcagaagcagaaagcatcacttccttt
atggatgtttcaaatcctttttatcagctttatgacacagttaggagttgtcggaataac
caagggcagctaatagctgaaccttttttccatttgccttcaaagaaaaaataccctgat
tattaccagcaaattaaaatgcccatatcactacaacagatccgaacaaagctgaagaat
caagaatatgaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgcc
aaacgctataatgtgcccaattcagccatctacaagcgagttctaaaattgcagcaagtt
atgcaggcaaagaagaaagagcttgccaggagagacgatatcgaggacggagacagcatg
atctcttcagccacctctgatactggtagtgccaaaagaaaaaggaacactcatgacagt
gagatgttgggtctcaggaggctatccagtaaaaagaacataagaaagcagcgaatgaaa
atcttattcaatgttgttcttgaagctcgagagccaggttcaggcagaagactttgtgac
ctatttatggttaaaccatccaaaaaggactatcctgattattataaaatcatcttggag
ccaatggacttgaaaataattgagcataacatccgcaatgacaaatatgccggtgaagag
ggaatgatagaagacatgaagctgatgttccggaatgccaggcactataacgaggagggc
tcccaggtatacaatgatgcacatatcctggagaagttactcaaggagaaaaggaaagag
ctgggcccactgcctgatgatgatgacatggcttctcccaaactcaagctgagtaggaag
agtggcatttctcctaaaaaatcaaaatacatgactccaatgcagcagaaactaaatgag
gtctatgaagctgtaaagaactatactgataagaggggtcgccgcctcagtgccatattt
ctgaggcttccctctagatctgagttgcctgactactatctgactattaaaaagcccatg
gacatggaaaaaattcgaagtcacatgatggccaacaagtaccaagatattgactctatg
gttgaggactttgtcatgatgtttaataatgcctgtacatacaatgagcctgagtctttg
atctacaaagatgctcttgttctacacaaagtcctgcttgaaacacgcagagacctggag
ggagatgaggactctcatgtcccaaatgtgactttgctgattcaagagcttatccacaat
ctttttgtgtcagtcatgagtcatcaggatgatgagggaagatgctacagtgattcttta
gcagaaattcctgctgtggatcccaactttcctaacaaaccaccccttacatttgacata
attaggaagaatgttgaaaataatcgctaccggcggcttgatttatttcaagagcatatg
tttgaagtattggaacgagcaagaaggatgaatcggacagattcagaaatatatgaagat
gcggtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagag
attcttctttcaccggcactcagctataccacaaaacatttgcataatgatgtggagaaa
gagaaaaaggaaaaattgccaaaagaaatagaggaagataaactaaaacgagaagaagaa
aaaagagaagctgaaaagagtgaagattcctctggtgctgcaggcctctcaggcttacat
cgcacatacagccaggactgtagctttaaaaacagcatgtaccatgttggagattacgtc
tatgtggaacctgcagaggccaacctacaaccacatatcgtctgtattgaaagactgtgg
gaggattcagctggtgaaaaatggttgtatggctgttggttttaccgaccaaatgaaaca
ttccacctggctacacgaaaatttctagaaaaagaagtttttaagagtgactattacaac
aaagttccagttagtaaaattctaggcaagtgtgtggtcatgtttgtcaaggaatacttt
aagttatgcccagaaaacttccgagatgaggatgtttttgtctgtgaatcacggtattct
gccaaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagctcagttagg
tttgtccctcgggatgtgcctctgcctgtggttcgcgtggcctctgtatttgcaaatgca
gataaaggtgatgatgagaagaatacagacaactcagaggacagtcgagctgaagacaat
tttaacttggaaaaggaaaaagaagatgtccctgtggaaatgtccaatggtgaaccaggt
tgccactactttgagcagctccattacaatgacatgtggctgaaggttggcgactgtgtc
ttcatcaagtcccatggcctggtgcgtcctcgtgtgggcagaattgaaaaagtatgggtt
cgagatggagctgcatatttttatggccccatcttcattcacccagaagaaacggagcat
gagcccacaaaaatgttctacaaaaaagaagtatttctgagtaatctggaagaaacctgc
cccatgacatgtattctcggaaagtgtgctgtgttgtcattcaaagacttcctctcctgc
aggccaactgaaataccagaaaatgacattctgctttgtgagagccgctacaatgaaagt
gacaagcagatgaagaaattcaaaggattgaagaggttttcactctctgctaaagtggta
gatgatgaaatttactacttcagaaaaccaattgttcctcagaaggagccatcacctttg
ttggaaaagaagatccagttgctggaagctaaatttgccgagttagaaggtggagatgat
gatattgaagagatgggagaagaagatagtgaggtcattgaacctccttctctacctcag
cttcagacccccctggccagtgagctggacctcatgccctacacacccccacagtctacc
ccaaagtctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagt
ggctacatcctgttcagcagtgagatgagggctgtgattaaggcccaacacccagattac
tctttcggggagctcagccgcctggtggggacagaatggagaaatcttgagacagccaag
aaagcggaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagca
gcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatg
ggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgca
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccg
ccaggtgtgcctggcctcccgggcatcccaccaccgggtgtgatgaaccaaggagtggcc
cctatggtagggactccagcaccaggtggaagtccatatggacaacaggtgggagttttg
gggcctccagggcagcaggcaccacctccatatcctggcccacatccacctggaccccct
gtcatacagcagccaacaacacccatgtttgtagctcccccaccaaagacccagcggctt
cttcactcagaggcctacctgaaatacattgaaggactcagtgccgagtccaacagcatt
agcaagtgggatcagacactggcagctcgaagacgtgacatccatttgtcaaaagaacag
gagagccgcctaccctctcactggctgaaaagcaaaggggcccacaccaccatggcagat
gccctctggcgccttcgagatttgatgctgcgggacactctcaacattcgccaagcatac
aacctagaaaacatttaa

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