Pongo pygmaeus (Bornean orangutan): 129034816
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Entry
129034816 CDS
T10128
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04136
Autophagy - other
ppyg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129034816 (ATG4C)
04136 Autophagy - other
129034816 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppyg01002
]
129034816 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyg04131
]
129034816 (ATG4C)
03029 Mitochondrial biogenesis [BR:
ppyg03029
]
129034816 (ATG4C)
Peptidases and inhibitors [BR:
ppyg01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129034816 (ATG4C)
Membrane trafficking [BR:
ppyg04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129034816 (ATG4C)
Mitochondrial biogenesis [BR:
ppyg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129034816 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
129034816
NCBI-ProteinID:
XP_054340488
LinkDB
All DBs
Position
1:complement(167440684..167525298)
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AA seq
458 aa
AA seq
DB search
MEATGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDEDKTLP
AESGCTIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPDALNIENSDSESWTSHTVKKFTASFEASLSGERELKTPTISLKE
TIGKYSDDHEMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLQGITIYVAQDCTVYNSDVIDKQSASMTSDNADDKAVIILVPVRLGGE
RTNTDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFERASEEITKMLKFSSKEKYPLFTFVN
GHSRDYDFTSTTTNEEDLFSEDEKKQLKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggctacaggaacagatgaagttgacaagctaaaaaccaaatttatatctgcttgg
aacaacatgaaatatagttgggtgttgaaaacaaagacatattttagtagaaattctcct
gtattattgcttggaaaatgttaccattttaaatatgaagatgaagataaaacgttacct
gcagaatcgggatgtacaatagaggatcacgtaattgcaggaaatgtagaagaatttcgt
aaagatttcatttctagaatatggctgacctacagggaagaattccctcaaatagaaggc
tcagctttgacaacagactgtgggtggggctgcacattgagaactggccagatgctcttg
gctcaaggactcatactacactttcttggtagagcttggacctggcctgatgctttgaat
attgaaaattcagactctgaatcatggacttcccacactgtcaaaaaatttactgcatca
tttgaagcatcactttcaggggaaagagaactcaaaaccccaacaatttctctgaaggaa
acgattgggaaatattctgatgatcatgaaatgcgaaatgaagtttatcataggaaaatc
atctcttggtttggtgattcccccttggctctttttggcttacatcaactaatagaatat
ggaaagaagtctgggaaaaaagcaggagattggtatggaccagctgtggttgctcacatt
ttaagaaaagcagttgaagaagcaagacaccctgatttacaaggaataactatttatgtt
gcccaagattgtacagtttacaattctgatgtaattgataaacagagtgcttccatgact
tctgataatgcagatgacaaagctgttattattctagttcctgttagacttggtggagaa
agaaccaacaccgactacttagaatttgtgaagggtattttaagcctggaatattgtgtg
ggtattattggtggcaaacctaaacagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgcccttctcccaaaaagatgtcttttcgaaaaatggatccc
agctgtacaataggattttactgtcgaaatgttcaggacttcgaacgagcttctgaagaa
atcaccaagatgctgaaattttcttctaaggagaaatatcccttatttacttttgtaaat
ggtcattccagagactatgattttacatctactacaaccaatgaagaagaccttttttca
gaggatgaaaagaaacaattaaaaagatttagcacggaagagtttgtcttgctttaa
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