Pongo pygmaeus (Bornean orangutan): 129035480
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Entry
129035480 CDS
T10128
Symbol
PCDH10
Name
(RefSeq) protocadherin-10 isoform X2
KO
K28836
protocadherin-10, delta 2
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129035480 (PCDH10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppyg04515
]
129035480 (PCDH10)
Cell adhesion molecules [BR:
ppyg04515
]
Cadherins
Protocadherins
129035480 (PCDH10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
TMEM98_N
GP38
Motif
Other DBs
NCBI-GeneID:
129035480
NCBI-ProteinID:
XP_054341858
LinkDB
All DBs
Position
3:145905448..145967691
Genome browser
AA seq
1040 aa
AA seq
DB search
MIVLLLFALLWMVEGVFSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARGFQTVPNSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFQVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGGGGVGEGGGGGGGAGLPPQQQRTGTALLTIRV
LDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRAREL
FGLSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISF
STVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAP
LDREAGDSYTLTVVARDRGEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGA
YIYAVSATDRDEGANAQLAYSILECQIQGMSVFTYVSINSENGYLYALRSFDYEQLKDFS
FQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLL
TRVAAVDADDGENARLTYSIVRGNEMNLFRMDWRTGELRTARRVPAKRDPQRPYELVIEV
RDHGQPPLSSTATLVVQLVDGAVEPQGGGGSGGGGSGEHQRPSRSGGGETSLDLTLILII
ALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGGGGSTCCGRQARARKK
KLSKSDIMLVQSSNVPSNPAQVPVEESGGFGSHHHNQNYCYQVCLTPESAKTDLMFLKPC
SPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVDRPRRVNSSAF
QEADIVSSKDSGHGDSEQGDSDHDATNRAQSAGMDLFSNCTEECKALGHSDRCWMPSFVP
SDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHSTLERKELDG
LLTNTRAPYKPPYLTRKRIC
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattattgtttgccttgctctggatggtggaaggagtcttttcccagctt
cactacacggtacaggaggagcaggaacatggcactttcgtggggaatatcgctgaagat
ctgggtctggacattacaaaactttcggctcgcgggtttcagacagtgcccaactcaagg
accccttacttagacctcaacctggagacaggggtgctgtacgtgaacgagaaaatagac
cgcgaacaaatctgcaaacagagcccctcctgtgtcctgcacctggaggtctttctggag
aaccccctggagctgttccaggtggagatcgaggtgctggacattaatgacaaccccccc
tctttcccagagccagacctgacggtggaaatctctgagagcgccacgccaggcactcgc
ttccccttggagagcgcattcgacccagacgtgggcaccaactccttgcgcgactacgag
atcacccccaacagctacttctccctggacgtgcagacccagggggatggcaaccgattc
gctgagctggtgctggagaagccactggaccgagagcagcaagcggtgcaccgctacgtg
ctgaccgcggtggacgggggaggtgggggaggagtaggagaaggagggggaggtggcggg
ggagcaggcctgcccccccagcagcagcgcaccggcacggccctactcaccatccgagtg
ctggactccaatgacaatgtgcccgctttcgaccaacccgtctacactgtgtccctacca
gagaactctcccccaggcactctcgtgatccagctcaacgccaccgacccggacgagggc
cagaacggtgaggtcgtgtactccttcagcagccacatttcgccccgggcgcgggagctt
ttcggactctcgccgcgcactggcagattggaggtaagcggcgagttggactatgaagag
agcccagtgtaccaagtgtacgtgcaagccaaggacctgggccccaacgccgtgcctgcg
cactgcaaggtgctagtgcgagtactggatgctaacgacaacgcgccagagatcagcttc
agcaccgtgaaggaggcggtgagcgagggcgcggcgcccggcactgtggtggcccttttc
agcgtgactgaccgcgactcagaggagaatgggcaggtgcagtgcgaactactgggagac
gtgcctttccgcctcaagtcttcctttaagaattactacaccatcgttaccgaagccccc
ctggaccgagaggcgggggactcctacaccctgactgtagtggcccgggaccggggcgag
cctgcgctctccaccagtaagtccatccaggtacaagtgtcggatgtgaacgacaacgca
ccgcgtttcagccagccggtctacgacgtgtatgtgactgagaacaacgtgccaggcgcc
tacatctacgcagtgagcgccaccgaccgcgatgagggcgccaacgcccagcttgcctac
tctatcctcgagtgccagatccagggcatgagcgtcttcacctacgtttctatcaactct
gagaacggctacttgtacgccctgcgctccttcgactatgagcagctcaaggacttcagt
tttcaggtggaagcccgggacgctggcagcccccaggcgctggctggtaacgccactgtc
aacatcctcatagtggatcaaaatgacaacgcccctgccatcgtggcgcctctaccaggg
cgcaacgggactccagcgcgtgaggtgctgccccgctcggcggagccgggttacctgctc
acccgcgtggccgccgtggacgcggacgatggcgagaacgcccggctcacttacagcatc
gtgcgtggcaacgaaatgaacctctttcgcatggactggcgcaccggggagctgcgcaca
gcacgccgagtcccggccaagcgcgacccccagcggccttatgagctggtgatcgaggtg
cgcgaccatgggcagccgcccctgtcctctaccgccaccctggtggttcagctggtggat
ggcgcggtggagccccagggcgggggcgggagcggaggcggagggtcaggagagcaccag
cgccccagccgctctggcggcggggaaacctcgctagacctcaccctcatcctcatcatc
gcgttgggctcggtgtccttcatcttcctgctggccatgatcgtgctggccgtgcgttgc
caaaaagagaagaagctcaacatctacacttgtctggccagcgattgctgcctctgctgc
tgctgctgcggtggaggaggttcgacctgctgtggccgccaagcccgggcgcgcaagaag
aaactcagcaagtcggacatcatgctggtgcagagctccaatgtacccagtaacccggcc
caggtgccggtggaggagtccgggggctttggctcccaccaccacaaccagaattactgc
tatcaggtatgcctgacccctgagtccgccaagaccgacctgatgtttcttaagccctgc
agcccttcgcggagtacggacactgagcacaacccctgcggggccatcgtcaccggttac
accgaccagcagcctgatatcatctccaacggaagcattttgtccaacgagactaaacac
cagcgagcagagctcagctatctagttgacagacctcgccgagtcaacagttctgcattc
caggaagccgacatagtaagctctaaggacagtggtcatggagacagtgaacagggagat
agtgatcatgatgccaccaaccgtgcccagtcagctggtatggatctcttctccaattgc
actgaggaatgtaaagctctgggccactcagatcggtgctggatgccttcttttgtccct
tccgatggacgccaggctgctgattatcgcagcaatctgcatgttcccggcatggactct
gttccagacactgaggtgtttgaaactccagaagcccagcctggggcagagcggtccttc
tccacctttggcaaagagaaggcccttcacagcactctggagaggaaggagctggatgga
ctgctgactaatacgcgagcgccttacaaaccaccatatttgacacggaaaaggatatgc
tag
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