Pongo pygmaeus (Bornean orangutan): 129035485
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Entry
129035485 CDS
T10128
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03015
mRNA surveillance pathway
ppyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129035485 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
129035485 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129035485 (PABPC4L)
03041 Spliceosome [BR:
ppyg03041
]
129035485 (PABPC4L)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129035485 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
129035485 (PABPC4L)
Spliceosome [BR:
ppyg03041
]
Complex C
Other components
Complex C specific factors
129035485 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RRM_7
RBD_DEAH11
RRM_occluded
RRM_10
RRM_MARF1
RRM_3
RBD_RDR6
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
129035485
NCBI-ProteinID:
XP_054341871
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All DBs
Position
3:complement(146982619..146988050)
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AA seq
428 aa
AA seq
DB search
MRVLPELGKPCLNSIAWPLCGDPEASTLEPGQSCDLVSPHRDCSKSSRGQTHSGKDREMN
VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA
DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG
KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL
RSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEA
AKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERICGCQGVKLYIKNLDD
TIDDEKLRNEFSSFGSISRVKVMQEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPL
SIALAQRH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgttgcctgagctggggaagccgtgtctgaactccattgcttggcctttgtgt
ggtgatcccgaggcctccacacttgagcccggccaaagctgtgacctagtatccccccac
agggattgctcaaagagctccaggggacagactcacagtggcaaggacagggagatgaat
gtagcagccaagtaccgcatggcctccctgtatgtgggtgacttacatgcagatgtcacc
gaggacctgctgttcaggaagttcagcactgtggggcctgtgctgtccatccgcatttgc
agggaccaggtcacccgccgctctctgggctatgcctacgtgaacttcttgcagctggct
gatgcccagaaggcgctggacacaatgaactttgacatcataaaaggcaaatccatccgt
ctcatgtggtctcagcgcgatgcctacttgaggagatctggaattgggaacgtgttcatc
aagaatctggacaaatctatcgataacaaaaccctttatgaacatttttcagcttttgga
aagatcctttcctccaaagtgatgagtgatgatcaaggctccaagggctatgcatttgtg
cactttcagaaccagagtgctgcagacagggccattgaggagatgaatggaaaactactc
aagggctgcaaggtgtttgttggcagattcaaaaaccgaaaagatcgtgaagctgaactc
agaagcaaagccagtgaattcaccaatatttacatcaaaaactttggcggtgacatggat
gatgagagattgaaggacgttttcagcaaatatggcaaaactctgagtgttaaggtgatg
acagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccatgaggct
gccaagaaagctgttgaagaaatgaatggaagggacataaatgggcagctgatttttgta
ggccgggcgcaaaagaaagtagagcgacaggctgagttaaagcaaatgtttgagcagctg
aaaagggaacgaatttgtgggtgccagggggtaaagctctatattaagaaccttgatgac
accattgatgatgaaaaactacgaaacgagttttcttcatttggatcaattagcagagtt
aaggtaatgcaggaagagggacagagcaaagggtttggcttgatctgcttctcctctcct
gaggatgctactaaagcaatgactgagatgaatggccgcatcttgggctccaaacctctt
agcattgccttggcccagagacactag
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