KEGG   Pongo pygmaeus (Bornean orangutan): 129035537
Entry
129035537         CDS       T10128                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    129035537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppyg03400]
    129035537
DNA repair and recombination proteins [BR:ppyg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     129035537
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz EIF3I WD40_WDHD1_1st Beta-prop_EML Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SPT8 RAWUL Beta-prop_IFT122_1st Beta-prop_SCAP WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF12 PLDc_2 NBCH_WD40
Other DBs
NCBI-GeneID: 129035537
NCBI-ProteinID: XP_054341990
LinkDB
Position
1:175450136..175452543
AA seq 502 aa
MNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHMDNVKALLLNRDGTQCLSGSSDGTIR
LWSLGQQRYIATYRVHDEGVWALQVNDAFTYVYSGGRDRKIYCTDLRNPDIRVLICEEKA
PVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHNFRASGDYDNDCTNPITPLCTQPDQ
VIKGGASIIXCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVY
VPNWFSVDLKTGMLTITLDESDCFAAWISAKDAGFSSPDGSDPKLNLGGLLLQALLEYWP
RTPMNPMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFGLLCRDSGG
ETESMLLNETMPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVQK
VMEHVYEKIINLDNESQTTGSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLR
TVKHFIWKSGGDLTLHYRQKST
NT seq 1510 nt   +upstreamnt  +downstreamnt
atgaatcaactgggaacaatcattgtatcagggtccactgaaaaggtgttaagggtatgg
gatccaagaacatgtgcaaaactaatgaagcttaaagggcacatggataatgtgaaggca
ttgctattaaacagagatggcacgcaatgcctttcaggcagttctgatgggacaattcgc
ctttggtcccttggccagcagagatatatagcaacataccgagtccatgatgaaggtgtt
tgggcgctgcaagtcaatgatgccttcacatatgtgtattctggtggaagggacaggaag
atttattgtacagacctaagaaaccctgacattcgggtgctaatttgtgaagaaaaagca
ccagttctcaagatggagcttgatagatcagctgatcctcctcctgcaatttgggttgca
acaactaagtctacagtaaataaatggactttgaaaggaattcataattttagagcctct
ggagattatgacaatgactgtacaaatcctataacacctctttgtacacaacctgaccag
gttattaagggggggtgctagtattatttagtgccacattcttaatgataagagacatat
attaaccaaagataccaataataatgtggcatattgggatgtattgaaggcatgtaaagt
tgaagatctgggcaaagtagattttgaagatgaaattaagaaaagatttaaaatggtgta
tgtgccaaattggttctcagtagacttaaaaacagggatgttaactattactttggatga
aagtgattgttttgctgcctggatttctgcaaaagatgcgggtttcagcagccctgatgg
gtcagatccaaaattgaatttaggaggacttttactccaagcactcctggaatattggcc
tagaacacctatgaatccaatggatgaagaggaaaatgaagtaaaccatgtaaatgggga
gcaggagaaccgagtgcagaagggaaatggatattttcaagtgcccccacacacacccgt
gatctttggtgaagctggaggtcgcacactgttcgggctgctctgccgagattctggggg
tgagactgagtctatgcttcttaatgaaacaatgccacaatgggtaattgacatcactgt
ggataaaaatatgcccaaattcaacaaaattcctttctacctccaacctcatgcatcttc
aggagcaaaaaccttaaaaaaagatagactctctgctagtgacatgctccaagtccaaaa
agttatggaacatgtttatgaaaaaattatcaacttggataatgagtctcaaactactgg
ctcttctaataatgaaaaaccaggagaacaggaaaaagaagaagatattgctgtgttggc
agaggagaaaattgaacttttgtgccaggaccaggttttggatccaaatatggaccttcg
aacagtgaaacacttcatatggaagagcggtggagacctcaccctccattaccgtcagaa
gtccacgtga

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