KEGG   Pongo pygmaeus (Bornean orangutan): 129035545
Entry
129035545         CDS       T10128                                 
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    129035545 (AFF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppyg03021]
    129035545 (AFF1)
Transcription machinery [BR:ppyg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     129035545 (AFF1)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int BRD4_CDT
Other DBs
NCBI-GeneID: 129035545
NCBI-ProteinID: XP_054342011
LinkDB
Position
3:99374444..99577871
AA seq 1218 aa
MAFTERVNSSGNSLYNDDRNLLRIREKERRNQEAHQEKEAFPEKIPLFGEPYKTAKGDEL
SSRIQNMLGNYEEVKEFLSTKSHTHRLDAPENRLGKPKYPLIPDKGSSIPSSSFHTSVHH
QSIHTPASGPLSVGNISHNPKMAQPRTEPMPSLHAKSCGPPDSQHLTQDRLGQEGFGSSH
HKKGDRRADGDHCASVTDSAPEREPSPLISSLPSPVPPLSPIHSNQQTLPRTQGSSKVHG
SNNNSKGCCPAKSPKDLAVKVHDKETPQDSLVAPAQPPSQTFPPPSLPSKSVAMQQKPTA
YVRPMDGQDQAPSESPELKPLPEDYRQQTFEKTDLKVPAKAKLTKLKMPSQSVEQTYSNE
VHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHVSSVTQNQKQYDTSSKTH
SNSQQGTSSMLEDDLQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESE
STSDSDSSSDSESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLTKVSQPAAPLEGP
GSTEPPRRHPESKGSSDSATSQEHSESKDPPPKSSSKALRAPPEAPHPGKRSCQKSPAQQ
EPPQRQTVGTKQPKKPVKASARAGSRASLQGEREPGLLPYGSRDQTSKDKPKVKTKGRPR
AAASNEPKPAVPPSSEKKKHKSSLPAPSKAPSGPEPTKDNVEDRSPEHFALVPLTQSQGP
PHSGSGSGSRTSGCRQAVVVQEDSRKDRLPLPLRDTKLLSPLRDTPPPQSLMVKITLDLL
SRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSSKLAKKRKGEAERDCDNKKIRLE
KEIKSQSSSSSSSHKESSKTKPSSQSSKKEMLPPPPVSSSSQKPAKPAHKRSRREADTCG
QDPPKSASSTKSNHKDSSIPKQRRVEGKGSRSSSEHKGSSGDTANPFPVPSLPNGNSKPG
KPQVKFDKQQADLHMREAKKMKQKAELMTDKVGKAFKYLEAVLSFIECGIATESESQASK
SAYSVYSETVDLIKFIMSLKSFSDATAPTQEKIFAVLCMRCQSILNMAMFRCKKDIAIKY
SRTLNKHFESSSKVAQALSPCIARSTGTPSPLSPMPSPASSVGSQSSAGSVGSSGVAATI
STPVTIQNMTSSYVTITSHVLTAFDLWEQAEALTRKNKEFFARLSTNVCTLALNSSLVDL
VHYTRQGFQQLQELTKTP
NT seq 3657 nt   +upstreamnt  +downstreamnt
atggcatttacggaaagagtcaacagcagtggcaacagtttgtacaatgacgacagaaac
ctgcttcgaattagagagaaggaaagacgcaaccaggaagcccaccaagagaaagaggca
tttcctgaaaagattcccctttttggagagccctacaagacagcaaaaggtgatgagctg
tctagtcgaatacagaacatgttgggaaactacgaagaagtgaaggagttccttagtact
aagtctcacactcatcgcttggatgctcctgaaaataggttgggaaagccaaaatatcct
ttaattcctgacaaagggagcagcattccatccagctccttccacactagtgtccaccac
cagtccattcacactcctgcgtctggaccactttctgttggcaacattagccacaatcca
aagatggcgcagccaagaactgaaccaatgccaagtctccatgccaaaagctgtggccca
ccggacagccagcacctgacccaggatcgccttggtcaggaggggttcggctctagtcat
cacaagaaaggtgaccgaagagctgacggagaccactgtgcttcggtgacagactcggct
ccagagagggagccttctcccttaatctcctctttgccttccccagttccccctttgtca
cctatacattccaaccagcaaactcttccccggacgcaaggaagcagcaaggttcatggc
agcaacaataacagtaaaggctgttgcccagccaaatctcccaaggacctagcagtgaaa
gtccatgataaagagacccctcaagacagtttggtggcccctgcccagccgccttctcag
acatttccacctccctccctcccctcaaaaagtgttgcaatgcagcagaagcccacggct
tatgtccggcccatggatggtcaagatcaggcccctagtgaatcccctgaactgaaacca
ctgccggaggactatcgacagcagacctttgaaaaaacagacttgaaagtgcctgccaaa
gccaagctcaccaaactgaagatgccttctcagtcagttgagcagacctactccaatgaa
gtccattgtgttgaagagattctgaaggaaatgacccattcatggcctcctcctttgaca
gcaatacatacgcctagtacagctgagccatccaagtttcctttccccacaaaggactct
cagcacgtcagttctgtaacccaaaaccaaaaacaatatgatacatcttcaaaaactcac
tcaaattctcagcaaggaacgtcatccatgctcgaagatgaccttcagctcagtgacagt
gaggacagtgacagtgaacaaaccccagagaagcctccctcctcatctgcacctccaagt
gctccacagtcccttccagaaccagtggcatcagcacattccagcagtgcagagtcagaa
agcaccagtgactcagacagttcctcagactcggagagcgagagcagttcaagtgacagc
gaagaaaatgagcccctagaaaccccggctccggagcctgagcctccaacaacaaacaaa
tggcagctggacaactggctgaccaaagtcagccagccagctgcgccactggagggcccc
ggaagcacagagcccccacggcggcacccagagagtaagggcagcagtgacagtgccacg
agtcaggagcattctgaatccaaagatcctccccctaaaagctccagcaaagccctccgg
gccccacccgaagccccccaccccggaaagaggagctgtcagaagtctccggcacagcag
gagcccccacagaggcaaaccgttggaaccaaacaacccaaaaaacctgtcaaggcctct
gcccgggcaggttcacgggccagcctgcagggggaaagggagccagggcttcttccctac
ggctcccgagaccagacttccaaagacaagcccaaggtgaagacgaaaggacggccccgg
gccgcagcaagcaacgagcccaagccagcagtgcccccctccagtgagaagaagaagcac
aagagctccctccctgctccctctaaggctccctcaggcccagaacccacgaaggacaat
gtggaggacaggagccctgagcactttgctcttgttcccctgactcagagccagggccca
ccccacagtggcagcggcagcggcagcaggactagtggctgccgccaagccgtggtggtc
caggaggacagccgcaaagacagactcccattgcctttgagagacaccaagctgctctca
ccactcagggacactcctcccccacaaagcttgatggtgaagatcaccctagacctgctc
tctcggataccccagcctcccgggaaggggagccgccagaggaaagcagaagataaacag
ccacccgcagggaagaagcacagctctgagaagaggagctcagacagctcaagcaagttg
gccaaaaagagaaagggtgaagcagaaagagactgtgataacaagaaaatcagactggag
aaggaaatcaaatcacagtcatcttcatcttcatcctcccacaaagaatcttctaaaaca
aagccctcctcacagtcctcaaagaaggaaatgctccccccgccacctgtgtcctcgtcc
tctcagaagccagccaagcctgcacataagaggtcaaggcgggaagcagacacctgtggc
caggaccctcccaaaagtgccagcagtaccaagagcaaccacaaagactcttccattccc
aagcagagaagagtagaggggaagggctccagaagctcctcggagcacaagggttcttcc
ggagatactgcaaatccttttccagtgccttctttgccaaatggtaactctaaaccaggg
aagcctcaagtgaagtttgacaaacaacaagcagaccttcacatgagggaggcaaaaaag
atgaagcagaaagcagagttaatgacggacaaggttggaaaggcttttaagtacctggaa
gccgtcttgtccttcatcgagtgtggaattgctacagagtctgaaagccaggcatccaag
tcagcttactctgtctactcagaaactgtagatctcattaaattcataatgtcattaaaa
tccttctcagatgccacagcgccaacacaagagaaaatatttgctgttttatgcatgcgt
tgccagtccattttgaacatggcgatgtttcgttgtaaaaaagacatagcaataaagtat
tctcgtactcttaataaacacttcgagagttcttccaaagtcgcccaggcactttctcca
tgcattgcaagaagcacaggcacaccatcccctctttccccaatgccttctcctgccagc
tccgtagggtcccagtcaagtgctggcagtgtggggagcagtggggtggctgccactatc
agcaccccagtcaccatccagaatatgacgtcttcctatgtcaccatcacgtcccatgtt
cttactgcctttgacctttgggaacaggccgaggccctcacaaggaagaataaagaattc
tttgctcggctcagcacaaatgtgtgcaccttggccctcaacagcagtttggtggacctg
gtgcactatacacgacagggttttcagcagctacaagaattaaccaaaacaccttaa

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