Pongo pygmaeus (Bornean orangutan): 129035622
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Entry
129035622 CDS
T10128
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129035622 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129035622 (FIP1L1)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129035622 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
129035622
NCBI-ProteinID:
XP_054342152
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Position
3:complement(67060431..67137108)
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AA seq
606 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKETALPSAKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRER
DRDRDRERERTRERERERDHSPTPSVFNRFVGDEERYRYREYAERGYERHRASREKEERH
RERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQEST
EATPAE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaggaagaaaatgccagtgctaatcct
ccatctggaattgaagatgaaactgctgaaaatggtgtaccaaaaccgaaagtaactgag
accgaagatgatagtgatagtgacagtgatgatgatgaagatgatgttcatgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaagacagggggaagagtttatggaactacaggaacaaaagtcaaaggagtagac
cttgatgcacctggaagcattaatggagttccactcttagaggtagatttggattctttt
gaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattatgggttt
aatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagtaacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaactcagagaaagaaacagcccttccatctgcaaaagctgagtttacttctcct
ccttctttgttcaagactgggcttccaccgagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccaattcaagcgttgggaagtggcaggatcgatatggg
agggccgaatcacctgatctaaggagattacctggggcaattgatgttatcggtcagact
ataactatcagccgagtagaaggaaggcgacgggcaaatgagaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccacctccgtttttc
cctccaggagctcctcccactcaccttccacctcctccatttcttccacctcctccgact
gtcagcactgctccacctctgattccaccaccgggtattccaataactgtaccacctcca
ggttttcctcctccaccaggcgctccacctccatctcttataccaacaatagaaagtgga
cattcctctggttatgatagtcgttctgcacgtgcatttccatatggcaatgttgccttc
ccccatcttcctggttctgctccttcatggcctagtcttgtggacaccagcaagcagtgg
gactattatgccagaagagagaaagaccgagatagagagagagacagagacagagagcga
gaccgtgatcgggacagagaaagagaacgcaccagagagagagagagggagcgtgatcac
agtcctacaccaagtgttttcaacaggtttgttggcgatgaagaacgatacagatacagg
gaatatgcagaaagaggttatgagcgtcacagagcaagtcgagagaaagaagaacgacat
agagaaagacgacacagggagaaagaggaaaccagacataagtcttctcgaagtaatagt
agacgtcgccatgaaagtgaagaaggagatagtcacaggagacacaaacacaaaaaatct
aaaagaagcaaagaaggaaaagaagcgggcagtgagcctgcccctgaacaggagagcacc
gaagctacacctgcagaatag
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