Pongo pygmaeus (Bornean orangutan): 129036121
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Entry
129036121 CDS
T10128
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03013
Nucleocytoplasmic transport
ppyg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129036121 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129036121 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129036121 (NDC1)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129036121 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
129036121
NCBI-ProteinID:
XP_054343080
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All DBs
Position
1:176578419..176647573
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AA seq
776 aa
AA seq
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MQRRHLLLAPRWTLLRRDLLDARGRFLELQPRLRDVSARQSWPVELVQTKPRRDELGPGP
SFAQAAFEAAPAGSSWGLPPFELRWRAGARSPVRPRLGAAISMATAVSGPCAGRSRDILW
RVLGWRIVASIIWSVLLLPICTTVFIIFSRIDLFHPIQWLSDSFSDLYSSYVIFYLLLLS
VVIIIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFIHAAMGMVMAWCAAVITQG
QYSFLVVPCTGANSFGSPAAQTCLNEYHLFFLLAGAFMGYSYSLLYFVNNMNYLPFPIIQ
QYKFLRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPL
DTVSGLLNLSLLYHVWLCGAFLLTTWYVSWILFKIYATEAHVFPVQPPFAEGSDECLPKV
LNSNPPPIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNGMTQ
KLVLYQEAAATNGRMSSSYPVEPKKLNSPEETTFQTPKSSQMPRPSVPPLVKTSLFSSKL
STPEVVSSFGTPFGSSVMNRMAGIFDVNTCYGSPQSPQLIRRGPRLWTSASDQQMTEFSN
PSPSTSISAEGKTMRQPSVIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRI
SGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccgccacctacttctggcgccccgctggaccctgcttcgaagggaccttttg
gacgccagagggcgattcctggagttacagccccgtttgcgggacgtgtctgcgcggcag
tcctggcccgttgagcttgtccagacgaagcctcgcagggatgagttggggcccgggccg
agcttcgctcaggcagcgtttgaggcagccccagcagggtcctcctggggccttcctccc
tttgaactgcggtggcgggcgggcgcacggtctcctgtacgccctagactaggggccgcc
atctctatggccacggccgtgagcgggccctgcgccggcaggtcgcgggacatactgtgg
cgcgttttgggctggaggatagttgcaagtattatttggtcagtgctgcttctacccatc
tgcaccacagtatttataattttcagcaggattgatttgtttcatcctatacagtggctg
tctgattctttcagtgacctgtatagttcctatgtaatcttttatctcctgctgctgtca
gtggtaataataataataagtattttcaatgtggagttctatgcagttgtgccttctatt
ccttgctccagactagctctgatagggaagatcattcatcctcagcaactcatgcactca
tttattcatgctgcaatgggaatggtgatggcctggtgtgctgcagtgataacccagggc
cagtacagttttcttgtggttccctgcactggtgctaacagctttggtagccctgctgcg
caaacctgcttaaatgaatatcatctttttttcctactggctggagcatttatgggctat
agctatagcctcctgtattttgttaacaacatgaactatcttccatttcctatcatacag
caatacaagttcttgcgttttaggagatctctgctcttactagttaaacacagttgtgtg
gaatcactgttcctggttagaaatttctgcattttatattattttcttggctatattccc
aaagcttggattagcactgctatgaaccttcacatagatgagcaggttcataggccactt
gacacagtgagtggcctcttaaatctctcgttactctaccatgtctggctgtgtggtgcc
tttctcctgacaacttggtatgtctcatggatactcttcaaaatctatgccacagaggct
catgtgtttcctgttcaaccaccatttgcagaagggtcagatgagtgccttccaaaagtg
ttaaatagcaatcctccccccatcataaagtatttagccttgcaggacctgatgttgctt
tctcaatattctccttcacgaagacaagaagtttttagcctcagccaaccaggtggacat
ccccacaattggaccgccatttcaagggagtgtttgaatcttttaaatggtatgactcag
aaactcgttctctatcaagaagctgctgctacgaatgggagaatgtcttcatcttaccca
gtggaacctaagaaattaaattctccagaagaaactacttttcagacaccaaaatctagc
cagatgcctcggccttcagtgccaccattagttaaaacatcactgttttcttcaaaatta
tctacacctgaggttgtgagctcatttgggaccccatttggctctagtgtaatgaatcgg
atggctggaatttttgatgtaaacacctgctatgggtcaccgcaaagtcctcagctaata
agaagggggccaagattgtggacatcagcttctgatcagcaaatgactgaattttctaat
ccttctccatctacctctattagtgctgagggtaagacaatgagacaacccagtgtgatt
tattcatggattcagaataaacgtgaacagattaagaatttcttgtcaaaacgggtgctg
ataatgtattttttcagtaagcacccagaggcctccattcaggctgttttttcagatgcc
caaatgcatatttgggcattagaaggtctgtcgcacttagtagcagcatcatttacagaa
gatagatttggagttgtccagactacactaccagctatccttaatactttgttgacgctg
caagaggcagtcgacaagtactttaagcttcctcatgcttccagtaaaccaccccggatt
tcaggaagccttgtggacacttcatataaaacattaagatttgcattcagagcatcacta
aaaactgctatctatcgaataactactacatttggtgaacatctgaatgctgtgcaagca
tctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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