KEGG   Pongo pygmaeus (Bornean orangutan): 129036121
Entry
129036121         CDS       T10128                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03013  Nucleocytoplasmic transport
ppyg05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129036121 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    129036121 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppyg03019]
    129036121 (NDC1)
Messenger RNA biogenesis [BR:ppyg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129036121 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 129036121
NCBI-ProteinID: XP_054343080
LinkDB
Position
1:176578419..176647573
AA seq 776 aa
MQRRHLLLAPRWTLLRRDLLDARGRFLELQPRLRDVSARQSWPVELVQTKPRRDELGPGP
SFAQAAFEAAPAGSSWGLPPFELRWRAGARSPVRPRLGAAISMATAVSGPCAGRSRDILW
RVLGWRIVASIIWSVLLLPICTTVFIIFSRIDLFHPIQWLSDSFSDLYSSYVIFYLLLLS
VVIIIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFIHAAMGMVMAWCAAVITQG
QYSFLVVPCTGANSFGSPAAQTCLNEYHLFFLLAGAFMGYSYSLLYFVNNMNYLPFPIIQ
QYKFLRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPL
DTVSGLLNLSLLYHVWLCGAFLLTTWYVSWILFKIYATEAHVFPVQPPFAEGSDECLPKV
LNSNPPPIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNGMTQ
KLVLYQEAAATNGRMSSSYPVEPKKLNSPEETTFQTPKSSQMPRPSVPPLVKTSLFSSKL
STPEVVSSFGTPFGSSVMNRMAGIFDVNTCYGSPQSPQLIRRGPRLWTSASDQQMTEFSN
PSPSTSISAEGKTMRQPSVIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRI
SGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcagcgccgccacctacttctggcgccccgctggaccctgcttcgaagggaccttttg
gacgccagagggcgattcctggagttacagccccgtttgcgggacgtgtctgcgcggcag
tcctggcccgttgagcttgtccagacgaagcctcgcagggatgagttggggcccgggccg
agcttcgctcaggcagcgtttgaggcagccccagcagggtcctcctggggccttcctccc
tttgaactgcggtggcgggcgggcgcacggtctcctgtacgccctagactaggggccgcc
atctctatggccacggccgtgagcgggccctgcgccggcaggtcgcgggacatactgtgg
cgcgttttgggctggaggatagttgcaagtattatttggtcagtgctgcttctacccatc
tgcaccacagtatttataattttcagcaggattgatttgtttcatcctatacagtggctg
tctgattctttcagtgacctgtatagttcctatgtaatcttttatctcctgctgctgtca
gtggtaataataataataagtattttcaatgtggagttctatgcagttgtgccttctatt
ccttgctccagactagctctgatagggaagatcattcatcctcagcaactcatgcactca
tttattcatgctgcaatgggaatggtgatggcctggtgtgctgcagtgataacccagggc
cagtacagttttcttgtggttccctgcactggtgctaacagctttggtagccctgctgcg
caaacctgcttaaatgaatatcatctttttttcctactggctggagcatttatgggctat
agctatagcctcctgtattttgttaacaacatgaactatcttccatttcctatcatacag
caatacaagttcttgcgttttaggagatctctgctcttactagttaaacacagttgtgtg
gaatcactgttcctggttagaaatttctgcattttatattattttcttggctatattccc
aaagcttggattagcactgctatgaaccttcacatagatgagcaggttcataggccactt
gacacagtgagtggcctcttaaatctctcgttactctaccatgtctggctgtgtggtgcc
tttctcctgacaacttggtatgtctcatggatactcttcaaaatctatgccacagaggct
catgtgtttcctgttcaaccaccatttgcagaagggtcagatgagtgccttccaaaagtg
ttaaatagcaatcctccccccatcataaagtatttagccttgcaggacctgatgttgctt
tctcaatattctccttcacgaagacaagaagtttttagcctcagccaaccaggtggacat
ccccacaattggaccgccatttcaagggagtgtttgaatcttttaaatggtatgactcag
aaactcgttctctatcaagaagctgctgctacgaatgggagaatgtcttcatcttaccca
gtggaacctaagaaattaaattctccagaagaaactacttttcagacaccaaaatctagc
cagatgcctcggccttcagtgccaccattagttaaaacatcactgttttcttcaaaatta
tctacacctgaggttgtgagctcatttgggaccccatttggctctagtgtaatgaatcgg
atggctggaatttttgatgtaaacacctgctatgggtcaccgcaaagtcctcagctaata
agaagggggccaagattgtggacatcagcttctgatcagcaaatgactgaattttctaat
ccttctccatctacctctattagtgctgagggtaagacaatgagacaacccagtgtgatt
tattcatggattcagaataaacgtgaacagattaagaatttcttgtcaaaacgggtgctg
ataatgtattttttcagtaagcacccagaggcctccattcaggctgttttttcagatgcc
caaatgcatatttgggcattagaaggtctgtcgcacttagtagcagcatcatttacagaa
gatagatttggagttgtccagactacactaccagctatccttaatactttgttgacgctg
caagaggcagtcgacaagtactttaagcttcctcatgcttccagtaaaccaccccggatt
tcaggaagccttgtggacacttcatataaaacattaagatttgcattcagagcatcacta
aaaactgctatctatcgaataactactacatttggtgaacatctgaatgctgtgcaagca
tctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag

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