Pongo pygmaeus (Bornean orangutan): 129036778
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Entry
129036778 CDS
T10128
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppyg04515
]
129036778 (PCDH12)
Cell adhesion molecules [BR:
ppyg04515
]
Cadherins
Protocadherins
129036778 (PCDH12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129036778
NCBI-ProteinID:
XP_054344333
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All DBs
Position
4:complement(146460723..146476497)
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AA seq
1183 aa
AA seq
DB search
MMQLLQLLLGLLGPGGYLFLLGDCQEVTTLTVKYQVSEEVPSGTVIGKLSQELGREERRR
QAGAAFQVLQLPQALPIQVDSEEGLLSTGRRLDREQLCRQWDPCLVSFDVLATGDLALIH
VEIQVLDINDHQPRFPKGEQELEISESASLRTRIPLDRALDPDTGPNTLHTYTLSPSEHF
ALDVIVGPDETKHAELIVVKELDREIHSSFDLVLTAYDNGNPPKSGTSLVKVSVLDSNDN
SPVFAESSLALEIQEDAAPGMLLIKLTATDPDQGPNGEVEFFLSKHMPPEVLDTFSIDAK
TGQVILRRPLDYEKNPAYEVDVQARDLGPNPIPAHCKVLIKVLDVNDNIPSIHVTWASQP
SLVSEALPKDSFIALVMADDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNATLDR
EQWPKYTLTLLAQDQGLQPLSAKKQLSIQISDINDNAPVFEKSRYEVSTRENNLPSLHLI
TIKAHDADLGINGKVSYRIQDSPVAHLVAIDSNTGEVTAQRSLNYEEMAGFEFQVIAEDS
GQPMLASSVSVWVSLLDANDNAPEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGP
AGTDTPPLAPHSSRPFLLTTIVARDADSGANGEPLYSIRSGNEAHLFILNPHEGQLSVNV
TNASSLIGSEWELEIVVEDQGSPPLQTRALLRVMFVTSVDHLRDSARKPGALSMSMLTVI
CLAVLLGIFGLILALFMSICRTEKKDNRAYNCREAESTYRQQPKRPQKHIQKADIHLVPV
LRGQAGEPCEVGQSHKDVDKEAMMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGAPTESRE
VLQDTVNLLFNHPRQRNASRENLNLPEPQPATGQPRSRPLKVAGSPTGRLAGDQGSEEAP
QSPPASSATLRRQRHLNGKVSPEKESGPRQILRSLVRLSVAAFAERNPVEELTVDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPGGSRSAIPDTDGPSARAGGQTDPEQEEGPLD
PEEDLSVKQLLEEELSSLLDPSTGLALDRLSAPDPAWMARLSLPLTTNYRDNVISPDAAA
TEEPRTFQTFGKAEAPELSPTGTRLASTFVSEMSSLLEMLLEQRSSMPVEAASEALRRLS
VCGRTLSLDLATSAASGMKVQGDPGGKTGTEGRSRGSSSSRCL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacttctgcaacttctgctggggcttttggggccaggtggctacttatttctt
ttaggggattgtcaggaggtgaccactctcacggtgaaataccaagtgtcagaggaagtg
ccatctggcacagtgatcgggaagctgtcccaggaactgggccgggaggagaggcggagg
caagctggggctgccttccaggtgttacagctgcctcaggcgctccccattcaggtggac
tctgaggaaggcttgctcagcacaggcaggcggctggatcgagagcagctatgccgacag
tgggatccctgcctggtttcctttgatgtgcttgccacaggggatttggctctgatccac
gtggagatccaagtgctggacatcaatgaccaccagccacggtttcccaaaggcgagcag
gagctggaaatctctgagagcgcctctctgcgcacccggatccccctggacagagctctt
gacccagacacaggccctaacaccctgcacacctacactctgtctcccagtgagcacttt
gccttggatgtcattgtgggccctgatgagaccaaacacgcagaactcatagtggtgaag
gagctggacagggaaatccattcatcttttgatctggtgttaactgcctatgacaatggg
aacccccccaagtcaggcaccagcttggtcaaggtcagcgtcttggactccaatgacaat
agccctgtgtttgctgagagttcactggcactagaaatccaagaagatgctgcccctggt
atgcttctcataaaactgaccgccacagaccctgaccaaggccccaatggggaggtggag
ttcttcctcagtaagcacatgcctccagaggtgctggacaccttcagtattgatgccaag
acaggccaggtcattctgcgtcgacctctagactatgaaaagaaccctgcctacgaggtg
gatgtccaggcaagggacctgggtcccaatcctatcccagcccattgcaaagttctcatc
aaggttctggatgtcaatgacaacatcccaagcatccatgtcacatgggcctcccagcca
tcactggtgtcagaagctcttcccaaggacagttttattgctcttgtcatggcagacgac
ttggattcaggaaacaatggtttggtccactgttggctgagccaagagctgggccacttc
aggctgaaaagaactaatggcaacacatacatgttgctaaccaatgccacactggacaga
gagcagtggcccaaatataccctcactctgttagcccaagaccaaggactccagccctta
tcagccaagaaacagctcagcattcagatcagtgacatcaacgacaatgcacctgtgttt
gagaaaagcaggtatgaagtctccacgcgggaaaacaacttaccctctcttcacctcatt
accatcaaggctcatgatgcagacttgggcattaatggaaaagtctcataccgcatccag
gactccccagttgctcacttagtagctattgactccaacacaggagaggtcactgctcag
aggtcactgaactatgaagagatggccggctttgagttccaggtgatcgcagaggacagc
gggcaacccatgcttgcatccagtgtctctgtgtgggtcagcctcttggatgccaatgat
aatgccccagaggtggtccagcctgtgctcagcgatggaaaagccagcctctccgtgctt
gtgaatgcctccacaggccacttgctggtgcccatcgagactcccaatggcttgggtcca
gcaggcactgacacacctccactggcccctcacagctcccggccattccttttgacaacc
atcgtggcaagagatgcagactcgggggcaaatggagaacccctctacagcatccgcagt
ggaaatgaagcccacctcttcatcctcaacccccatgaggggcagctgtccgtcaacgtc
accaatgccagcagcctcattgggagtgagtgggagctggagatagtagtagaggaccag
ggaagcccccccttacagacccgagccctgttgagggtcatgtttgtcaccagtgtggac
cacctgagggactcagcccgcaagcctggggccttgagcatgtcgatgctgacggtgatc
tgcctggctgtactgctgggcatcttcgggttgattctggctttgttcatgtccatctgc
cggacagagaagaaggacaacagggcctacaactgtcgggaggccgagtccacctaccgc
cagcagcccaagaggccccagaaacacattcagaaggcggacatccacctcgtgcctgtg
ctcaggggtcaggcaggtgagccttgtgaagtcgggcagtcccacaaagacgtggacaag
gaggcgatgatggaagcaggctgggacccctgcctacaggcccccttccacctcaccccg
accctgtacaggacactgcgtaatcaaggcaaccagggagcaccgacagagagccgagag
gtgctgcaagacacggtcaacctccttttcaaccatcccaggcagaggaacgcctcccgg
gagaacctgaaccttcccgagccccagcctgccacaggccagccacgttccaggcctctg
aaggttgcaggcagccccacagggaggctggctggagaccagggcagtgaggaggcccca
cagagcccaccagcttcctctgcaaccctgagacggcagcgacatctcaatggcaaagtg
tcccctgagaaagaatcagggccccgtcagatcctgcggagcctggtccggctgtctgtg
gctgccttcgccgagcggaaccccgtggaggagctcactgtggattctcctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cgaggaaataagtacttggccaagccaggaggcagcaggagtgcaatcccagacacagat
ggcccaagtgcaagggctggaggccagacagacccagaacaagaggaagggcctttggat
cctgaagaggacctctctgtgaagcaactgctagaagaagagctgtcaagtctgctggac
cccagcacaggtctggccctggatcggctgagtgcccctgacccggcctggatggcgaga
ctgtctttgcccctcaccaccaactaccgtgacaatgtgatctccccggatgctgcagcc
acagaggagccgaggaccttccagacgttcggcaaggcagaggcaccggagctgagccca
acaggcacgaggctggccagcacctttgtctcggagatgagctcactgctggagatgctg
ctggaacagcgctccagcatgcctgtggaggccgcctccgaggcgctgcggcggctctca
gtctgcgggaggaccctcagtctagacttggccaccagtgcggcctcaggcatgaaagtg
caaggggacccaggtggaaagacggggactgagggcaggagcagaggcagcagcagcagc
aggtgcctgtga
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integrated database retrieval system
