Pongo pygmaeus (Bornean orangutan): 129036845
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Entry
129036845 CDS
T10128
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129036845 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppyg01009
]
129036845 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppyg04515
]
129036845 (PCDH1)
Protein phosphatases and associated proteins [BR:
ppyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129036845 (PCDH1)
Cell adhesion molecules [BR:
ppyg04515
]
Cadherins
Protocadherins
129036845 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129036845
NCBI-ProteinID:
XP_054344456
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All DBs
Position
4:complement(146368096..146396204)
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AA seq
1237 aa
AA seq
DB search
MDSGAGGRRCPEAALLILGPARMGPLRHSPGPGGQQLLLPSMLLALLLLLAPSPGHATRV
VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPEN
TNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDR
ERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAE
LVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSN
TSHRLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSGKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS
PSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggggcgggcggccggcgctgcccggaggcggccctcctgattctggggcct
gccaggatggggcccctgaggcatagcccaggccctggggggcaacagctactgctgccc
tccatgctgctagcactgctgctcctgctggctccatccccaggccacgccactcgggta
gtgtacaaggtgccggaggaacagccacccaacaccctcattgggagcctcgcagccgac
tatggttttccagatgtggggcacctgtacaagctagaggtgggtgccccataccttcgt
gtggatggcaagacaggtgacattttcaccaccgagacctccatcgaccgtgaggggctc
cgtgaatgccagaaccagctccctggtgatccctgcatcctggagtttgaggtgtctatc
acagacctcgtgcagaatggcagcccccggctgctagagggccagatagaagtacaagac
atcaatgacaacacacccaacttcgcctcaccagtcatcactctggccatccctgagaac
accaacatcggctcactcttccccatcccgctggcttcagaccgtgatgctggtcccaac
ggtgtggcatcctatgagctgcaggctgggcctgaggcccaggagctattcgggctgcag
gtggcagaggaccaggaggagaagcaaccacagctcatcgtgatgggcaacctggaccgt
gagcgctgggactcctacgacctcaccatcaaggtgcaggatggcggcagccccccacgc
gccagcagtgccctgctgcgtgtcaccgtgctcgacaccaatgacaacgcccccaagttt
gagcggccctcctatgaggccgaactatctgagaatagccccataggccactcggtcatc
caggtgaaggccaatgactcagaccaaggtgccaatgcagagattgaatacacattccac
caggctcccgaagttgtgaggcgtcttcttcgactggacaggaacactggacttatcact
gttcagggcccggtggaccgtgaggacctaagcaccctgcgcttctcagtgcttgctaag
gaccgaggcaccaaccccaagagtgcccgtgcccaggtggttgtgaccgtgaaggacatg
aatgacaatgcccccaccattgagatccggggcatagggctagtgactcatcaagatggg
atggctaacatctcagaggatgtggcagaggagacagctgtggccctggtgcaggtgtct
gaccgagacgagggagagaatgcagctgtcacctgtgtggtggcaggtgatgtgcccttc
cagctgcgccaggccagtgagacaggcagtgacagcaagaagaagtatttcctgcagact
accaccccgctggactacgagaaggtcaaagactacaccattgagattgtggctgtggac
tctggcaaccccccactctccagcaccaactccctcaaggtgcaggtggtggacgtcaat
gacaacgcacctgtcttcactcagagtgtcactgaggtcgccttcccggaaaacaacaag
cctggtgaagtgattgctgagatcactgccagtgatgctgactctggctctaatgctgag
ctggtttactctctggagcctgaaccggctgctaagggcctcttcaccatctcacccgag
actggagagatccaggtgaagacatccctggatcgggaacagcgggagagctatgagttg
aaggtggtggcagctgaccggggcagccctagcctccagggcacagccactgtccttgtc
aatgtgctggactgcaatgacaatgaccccaaatttatgctgagtggctacaacttctca
gtgatggagaacatgccagcgctgagtccagtgggcatggtgactgtcattgatggagac
aagggggagaatgcccaggtgcagctctcagtggagcaggacaatggtgactttgttatc
cagaatggcacaggcaccatcctatccagcctgagctttgatcgagagcaacaaagcacc
tacaccttccagctgaaggcggtggatggtggcgtcccacctcgctcagcttatgttggt
gtcaccatcaatgtgctggacgagaatgacaatgcaccctatatcactgccccttctaac
acctctcaccggctgctgaccccccagacacgtcttggtgagacggtcagccaggtggca
gccgaggactttgactctggtgtcaatgctgagctgatctacagcattgcaggtggcaac
ccttatggactcttccagattgggtcacattcaggtgccatcaccctggagaaggagatt
gagcggcgccaccatgggctacaccgcctggtggtgaaggtcagtgaccgcggcaagccc
ccacgctatggcacagccttggtccatctttatgtcaatgagactctggccaaccgcacg
ctgctggagaccctcctgggccacagcctggacacgccgctggatattgacattgctggg
gatccagaatatgagcgctctaagcagcgtggcaacattctctttggtgtggtggctggt
gtggtggccgtggccttgctcatcgccctggcggttcttgtgcgctactgccgacagcgg
gaggccaaaagtggttaccaggctggtaagaaggagaccaaggacctgtatgcccccaag
cccagtggcaaggcctccaagggaaacaaaagcaagggcaagaagagcaagtccccaaag
cccgtgaagccagtggaggacgaggatgaggccgggctgcagaagtccctcaagttcaac
ctgatgagcgatgcccctggggacagtccccgcatccacctgcccctcaactacccacca
ggcagccctgacctgggccgccactatcgctctaactccccactgccttccatccagctg
cagccccagtcaccctcggcctccaagaagcaccaggtggtacaggacctgccacctgca
aacacattcgtgggcaccggggacaccacgtccacgggctctgagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgccgcgtcacc
ttctcggccaccagccaggcccaggagctgcaggacccatcccagcacagttactatgac
agtggcctggaggagtctgagacgccgtccagcaagtcatcctcagggcctcgactcggt
cccctggccctgcctgaggatcactatgagcgcaccacccctgacggcagcataggagag
atggagcaccccgagaatgaccttcgccctttgcctgatgtcgccatgacaggcacatgt
acccgggagtgcagtgagtttggccactctgacacatgctggatgcctggccagtcatct
cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccgaaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca
cccgcagccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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