Pongo pygmaeus (Bornean orangutan): 129036969
Help
Entry
129036969 CDS
T10128
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyg04131
]
129036969 (SH3TC2)
Membrane trafficking [BR:
ppyg04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129036969 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SH3_1
TPR_1
SH3_9
TPR_8
SNAP
TPR_2
TPR_MalT
TPR_7
Motif
Other DBs
NCBI-GeneID:
129036969
NCBI-ProteinID:
XP_054344684
LinkDB
All DBs
Position
4:complement(153764978..153827608)
Genome browser
AA seq
1288 aa
AA seq
DB search
MGGCFCIPRERSLTRGPGKETPSKDPTVSSECIASSEYKEKCFLPQNINPDLTLSFCVKS
RSRRCVNGPLQEAARRRLWALENEDQEVRMLFKDLSARLVSIQSQRAQFLITFKTMEEIW
KFSTYLNLGYVSMCLEHLLFDHKYWLNCILVEDTEIQVSIDDKHLETIYLGLLIQEGHFF
CRALCSVTPPAEKEGECLTLCKNELISVKMAEAGSELEGVSLVTGQRGLVLVSTLEPLPL
PFHQWFLKNYPGSCGLSRKRDWTGSYQIGRGRCKALKGYEPGEKDELSFYQGESIEIIGF
VIPGLQWFIGKSTSSGQVGFVPTRNIDPDSYSPMSRNSAFLSDEERCSLLALGSDKQTEC
SSFLHTLARTDITSVYRLSGFESIQNPPNDLSASQPEGFKEVRPGRAWEEHQAVGSRQSS
SSEDSSLEEELLSATSDSYHLPEPDDLDDPELLMDLSTGQEEEAENFAPILSFLDHEGYA
DHFKSLYDFSFSFLTSSFHSFSEEDEFVAYLEASRKWAKKSHMTWAHARLCFLLGRLSVR
KVKLSQARVYFEEAIHILNGAFEDLSLVAFLYINLAAIYLKQRLRHKGSTLLEKAGALLA
CLPDRESSAKHELDVVAYVLRQGIVVGSSLLEARACFLAIRLLLSLGRHEEVLPFAERLQ
LLSGHPPASEAVASVLSFLYDKKYLPHLAVASVQQHGIQSAQGMSLPIWQVHLVLQNTTK
LLGFPSPGWGEVSALACPMLRQALAACEELADRSTQRALCLILSKVYLQHRSPDGAIHYL
SQALVLGQLLGEQESFESSLCLAWAYLLASQAKKALDVLEPLLCSLKETESLTQRGVVYN
LLGLALQGEGRVNRAAKSYLRALNRAQEVGDVHNQAVAMANLGHLSLKSWAQHPARNYLL
QAVRLYCELQASKETDMELVQVFLWLAQVLVSGHQLTDGLLCYEMALLFGLRHRHLKSQL
QATKSLCHFYSSVSPNPEACITYHEHWLALAQQLRDREMEGRLLESLGQLYRNLNTVRSL
RRSLTCIKESLRIFIDLGERDKAAEAWLGAGRLHYLMQEDELVELCLQAAIQTALKSEEP
LLALKLYEEAGDVFFNGTRHRHHAVEYYRAGAVPLARRLKVVRTELRIFNKLTELQISLE
GYEKALEFATLAARLSTVTGDRRQELVAFHRLATVYYSLNMYEMAEDCYLKTLSLCPPWL
QSPKEALYYAKVYYRLGRLTFCQLKDAHDATEYFLLALAAAVLLGDEELQDTIRSRLDNI
CQSPLWHSRPSGCSSERARWLSGGGLAL
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctgcttctgcatccccagggagcggagtctgacccggggcccaggtaaagaa
actccttccaaggatccaactgtatcgagtgagtgtatagcctcatctgaatacaaggaa
aaatgttttctgccacagaacattaatccagacctgacactctccttctgtgtaaagagc
cgctccaggaggtgtgtaaatggacccctacaggaagctgctcggaggcggctctgggca
ctggaaaatgaggaccaggaggtgcgcatgctgtttaaggacctctcagcaaggttggtc
agtatccagtctcagagggctcagtttctcatcaccttcaagaccatggaggaaatctgg
aagttctccacctaccttaatttaggctacgtatccatgtgtctggaacatctcctcttt
gaccacaagtactggcttaactgcatattggtggaggatacagagatccaagtgtctata
gatgataaacacctggaaacaatatacctgggactcctgatacaggaaggccacttcttc
tgcagagccctgtgctctgtgactccaccagctgagaaggaaggggaatgcttgacactt
tgcaagaatgagttaatctcagtgaagatggcagaagcagggtccgagttggaaggcgtg
tctttggtgacaggtcagcggggcctggtactggtgtcaaccttggagcctctgcctctc
cctttccaccagtggttcctaaagaattatccaggaagctgtggcctttccaggaagagg
gattggacaggctcctatcagattggcagaggacgctgtaaggccttgaagggttatgag
ccaggagaaaaggatgaactgagtttctaccagggagaaagcattgagatcattggcttt
gtcatacctgggcttcagtggttcattggaaagtcgacgagttcaggacaagtgggcttt
gtccccaccaggaacatagatcctgattcttattccccaatgagcaggaactctgccttt
ctcagtgatgaggagagatgttccctgttggccctgggaagtgataagcagactgagtgt
tccagctttctccacactcttgctcgcactgacatcacatctgtctaccggctcagtggg
tttgaatccatccagaatcctccaaatgatctgagtgcatcccagcctgaaggcttcaag
gaggtcaggcctggcagagcctgggaagagcatcaggccgtgggctccagacagtccagc
agctctgaggactccagcctggaggaggagctcctctcagccacctcagacagctatcac
ctgccggagcctgatgaccttgatgacccggaactgctcatggacctaagcactggtcag
gaggaggaggctgagaacttcgcccccatattgtcttttctggatcatgaaggttatgct
gaccactttaaaagtctctatgacttctccttctctttcctcacttcttcctttcatagc
ttctctgaggaggatgagtttgtggcctacctggaggcatcaagaaagtgggccaagaag
agccacatgacctgggcccatgcccggctctgcttcctcctgggccggctgagcgtcagg
aaggtcaaactctctcaggccagggtgtactttgaggaggccatccacattctcaatgga
gcatttgaggacctgtccttggtggcctttctgtacatcaatttggctgccatctacctg
aaacagaggctgagacataaaggctccaccctgttggaaaaggcaggtgccctgctggcc
tgcctgcctgaccgtgagtctagtgccaagcatgaactcgacgtggtggcctacgtgctg
cgacaggggattgtggtgggcagcagcctgctggaggccagggcctgctttctggccatc
cgcttgctcctgagcctaggccggcatgaggaggtcctgccctttgccgagcgcctgcag
ctcctctctggacaccctcctgcctctgaggctgtggccagtgttttgagttttctgtat
gacaagaaatatcttccacaccttgcagtggcctctgtccagcaacatggtatccagagt
gcccaagggatgtctcttcctatttggcaggtccacctggtcctccagaacacaaccaag
ctccttggctttccctccccaggctggggtgaagtttctgccttggcctgcccaatgctc
agacaggccctggctgcctgtgaggaactagcagaccggagcacccagagggccctgtgt
ctcatcctttccaaagtgtacctccagcacaggtctcctgatggtgccatccactacctg
agccaggccttggtgctagggcagctgctgggtgagcaggaatcctttgagtcttctctc
tgcctggcatgggcctatctcttagccagccaggccaagaaggctttggacgtgcttgag
ccactgctatgctccctgaaggagacagagagtctcactcaaaggggagtcgtctataac
ctcctgggacttgcactccaaggtgaaggtcgggtgaacagggcagccaagagctatctt
cgggccttgaacagagcccaggaggtgggagatgtgcataaccaggcagtggctatggcc
aatcttggccacctgagccttaagtcctgggctcagcatccagccagaaactatctcctg
caggctgtacgactctattgtgaacttcaggccagtaaggagacagacatggaattagta
caggtgtttctctggttggcccaagttctggtgtctggacaccagctgaccgatggcctt
ctttgttatgaaatggcattgctgtttggcttaaggcatcgacatctaaagagtcagctt
caggccaccaaatccctctgccatttctacagctctgtgtccccaaaccctgaggcatgc
atcacctaccatgagcactggctggccctggctcagcaactcagggaccgggagatggaa
gggaggctgctggagtccctggggcagctttatcggaacctaaacaccgtcaggtccctc
aggaggtcactcacatgcatcaaggagagcctgcgtatcttcattgacctgggggagaga
gacaaggctgctgaggcctggcttggggcggggcgactccactacctcatgcaggaagac
gagctggtggagctgtgcctgcaggcagccatccagacagccctgaagtcagaggagcct
ttgctggctctcaaactttatgaagaagcaggtgatgtgttcttcaatgggacccgccac
aggcatcatgcagtggagtactaccgagctggagctgttcctttagcaaggaggttgaag
gtggtgagaactgagctccggattttcaacaagctgacagagctgcagattagccttgaa
ggctatgagaaggctttggaatttgccaccctggccgccaggctcagcacagtcacagga
gatcggaggcaggagctggtggcatttcaccgcctggctacagtgtactactccctgaac
atgtatgagatggctgaggactgctacctgaagaccctgtccctctgtccaccctggctg
cagagtcccaaggaggccctgtactatgccaaggtgtattatcgcctgggccgactcacc
ttctgccagctgaaggatgcccatgatgccactgagtacttccttctggccctggcagca
gcggtcctgctgggtgacgaggagcttcaggacaccattaggagcaggctggacaacatc
tgccagagccccctgtggcacagcaggccctccgggtgctcctcagagagggcgcggtgg
ctgagtggcggtggcctggccctctga
DBGET
integrated database retrieval system
