Pongo pygmaeus (Bornean orangutan): 129037147
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Entry
129037147 CDS
T10128
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129037147 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyg03041
]
129037147 (DDX46)
Enzymes [BR:
ppyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129037147 (DDX46)
Spliceosome [BR:
ppyg03041
]
Complex A
U2 snRNP components
U2 related factors
129037147 (DDX46)
Complex B
129037147 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
129037147
NCBI-ProteinID:
XP_054344987
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All DBs
Position
4:139278901..139350191
Genome browser
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS
KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggagtcacgccactatcgaaaacgatcggcatcccggggtcgctctggaagt
cggtctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagtagagatagagataggaggagagagaggtctcgtagcagggataaaagaagatct
cggtcaagggacaggaagcgtctgagacgttccagaagtagagagagagacagaagccga
gagcgaagaagatctcgaagtagagacaggagacgctcaaggagtagaagccggggccgg
cgatcccgatcctctagtcctggaaataaaagcaagaaaactgagaatagatctaggtcc
aaagagaaaactgatggtggggaaagttctaaagagaagaaaaaagacaaagatgacaag
gaggatgaaaaagaaaaagatgctggcaactttgaccagaataagctggaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgagaagagcaacgtaaaaaggctatggaa
aacataggagaactgaaaaaggaaatcgaagagatgaaacaagggaaaaagtggagttta
gaggacgatgatgatgatgaagatgatcctgcagaagctgaaaaggagggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aaatttaacatgagaagtgtaaaaggtggtgggggaaatgaaaagaagtctgggccaacg
gtcacaaaagttgtcactgttgtgacaaccaaaaaagcagttgtggattctgataagaag
aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagcccttacagggtatcaaacaaaacagcgaaagcttctagaacca
gttgatcatggaaaaattgaatatgagccatttaggaaaaacttctatgttgaagttcca
gaactagcaaaaatgtctcaagaagaggtaaatgtgtttcgattggaaatggagggcatt
acagttaaaggaaaaggttgccccaaaccaattaaatcctgggtccagtgtggaatttcc
atgaagatcttaaattccctcaaaaagcatggctatgagaagcccacacccatccaaacc
caagctattcctgctataatgtctggacgagatttgattggcattgccaaaacaggaagt
ggaaagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcatta
gaggaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacag
attactaaagagtgtaagaagttttccaagactttgggacttagagtggtctgtgtttac
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacccggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacgtatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccccaggtcatgcgcatcgtggataatgttcgtcctgatcgacagacggttatgttttca
gctactttccccagagctatggaggctttggctcgcaggatcctgagtaaacctattgaa
gtacaagttggaggcaggagtgtggtttgctcagatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttctaggccattatcaagagtcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttcttaaggatttaatg
agagcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacctgcaaacttcttgtggctacctctgttgctgcc
cgaggtctagatgtgaaacatctgattcttgtagtaaattatagctgccccaaccattat
gaggattatgtacacagagcagggcggactggaagagcaggaaacaagggttatgcttat
acttttatcacagaggatcaagctcgctatgctggtgacataattaaagctcttgaattg
tcagggactgcagtacctcctgatttagagaaactgtggagtgatttcaaagatcaacag
aaagctgaggggaaaataattaaaaagagtagtggattctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaatgagaggaagaagttacaaaaagcagctcttggt
ctgcaggattcagatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtaaaggatatggctgctcctggaacatcaagtgttcctgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gcccagaagaatttgggcatcgagtctcaggtagatgtgatgcagcaggccaccaatgca
attcttagaggtggcaccattctggctcccactgtttctgcaaaaaccattgcagaacaa
cttgctgaaaagatcaatgccaagctcaattatgtgcctttagagaaacaagaagaagag
agacaggatggtggacagaatgagtcttttaagagatatgaagaagaattagagatcaat
gacttcccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagt
gaatactctgaagccgcaattacaatcagaggaacctacttccctcctggcaaagaaccc
aaggaaggcgagcggaagatttacttggcaattgaaagtgccaatgaactggctgtgcag
aaagcaaaggcagaaatcaccaggctcataaaagaagagctgatccggctgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttatag
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