Pongo pygmaeus (Bornean orangutan): 129037190
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Entry
129037190 CDS
T10128
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129037190 (SOX30)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129037190 (SOX30)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129037190
NCBI-ProteinID:
XP_054345064
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Position
4:complement(162454481..162481997)
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AA seq
720 aa
AA seq
DB search
MEPPPSSPTLSAAASATLASSCGEAVATGLQPAVRRLLQVKPEQVLLLPQPQARNEEAAA
SPAQARLLQFRPDLRLLPPPAASDGATTRPELHPVQPGALHVKAKKQELGPSLDQSVGPR
GAVETGPRASRVVKLEGPGPALGYFRGDEKGKLEAEEVMRDAMQGGEGKSPAAIREGVIK
TEEPERLFEDCRLGTEPASNDLVHGSAEVILAPTSGAFGPHQQDLRIPLTLHTVPPGARI
QFQGAPPSELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDR
NGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKI
KEKHREEFPGWVYQPRPGKRKRFPLSASNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPS
LQNPITHPVGETSPAIQLPTPTVQRPSPVTLFQPSVSSAAQVAVQDPSLPLYPALPPQHF
AGPSQTDTHQLHSEATHTVKQPTPVSLESANRISSSASNAHARFATSTIQPPKEYSSISP
CPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSR
PPFGYGNFPSSMPECLSYYEDRYPKHEGIFSALSRDYSFRDYSSECAHSENSRSCENMNG
TSYYNSHSHSGEEDLNPVPQLDIGTLENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggagccccctccgtcgtctcccacattgagcgcggccgccagtgcgaccttggcctcg
tcgtgcggggaggccgtggcgaccggcttacagcccgcggtgcggcggctgctgcaggtg
aagccagagcaggtgttgctgctaccacagcctcaggcccggaacgaggaagccgctgcc
tcgcccgcgcaggcccggctgttgcagttcaggccggacctgcggctcctgccgccgccg
gcagcgtcagacggcgccaccaccaggcccgagttgcacccggtgcagcccggggcgctg
cacgtcaaggccaagaagcaggagctggggcccagcctggatcagtcagtggggcctcgg
ggggccgtcgaaaccggtcctagagcctccagggtggtcaagttggaaggtcccgggccg
gccctcggctacttccgaggggacgagaagggcaagctggaggcggaggaggtcatgaga
gacgcaatgcaaggcggggaaggcaaaagcccggcggccatccgagaaggtgtgatcaaa
acggaggaacccgagagactcttcgaggactgcaggctcggcacggagcccgcatccaat
gacctggttcatggcagcgcggaggtcatcttggctccaacgtccggtgcctttgggccg
caccagcaagaccttaggatccctttgactctccacacggtcccccctggggcccggatc
cagtttcagggagctccgccttcagagctgataagattgaccaaagtccccctgacacca
gtgcctattaaaatgcagtccctactggagccttctgtaaaaattgaaaccaaagatgtc
ccgctcaccgtgttgccctcagatgcaggcataccagatactcccttcagtaaggacaga
aatggtcatgtgaagcgacccatgaacgcatttatggtttgggcaaggatccaccgacca
gcactagccaaagctaacccagcagccaacaatgcagaaatcagtgtccagcttgggtta
gagtggaacaaacttagtgaagaacaaaagaaaccctattacgatgaagcacaaaagatt
aaagaaaagcacagagaggaatttcctggttgggtttatcagcctcgtccagggaagcga
aaacgattccctctaagtgcttccaatgtattttctggtaccacacagaatatcatctct
acaaatcctacaacagtttatccttaccggtcacctacgtactctgtggtaattcccagc
ctacagaatcccatcactcatccagttggtgaaacctcacctgctatccagctgcccaca
cctacagtccagcgcccaagccctgtcacacttttccagcccagcgtctccagtgctgct
caggtggctgtccaggatccaagtctacctctctatccagcactcccaccccaacacttt
gctgggccttcccaaacagacactcatcagctgcattctgaagccactcacactgtgaag
caacccacccctgtctctctagagagcgccaacaggatttcaagtagtgcaagtaatgcc
catgccagatttgcaacttcgaccatccaacctcctaaggagtattccagcatttcccct
tgtcccagaagtgctccaatcccccaggcttctcccattccacacccacatgtttaccag
ccccctccccttggccatccagccacactgtttggcacaccaccaagattctcttttcat
cacccttacttcctacccggacctcactacttcccatcaagtacatgcccttacagccgg
cctccctttggctatggaaattttccgagttcaatgccagaatgccttagttattatgaa
gacaggtacccaaaacatgagggtatattttcagctttaagtagagactattcttttaga
gactactcaagtgaatgcgcacacagcgaaaattctcggagttgtgagaacatgaatgga
acttcttactataacagtcatagccacagtggggaagaagacttaaaccctgtgcctcag
ctggacattggaaccttggagaatgtcttcacagccccgacatcaactccttctagcatc
cagcaagtcaatgtcactgacagtgatgaggaggaagaagaaaaagtgctcagggattta
taa
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