Pongo pygmaeus (Bornean orangutan): 129037491
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Entry
129037491 CDS
T10128
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129037491 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129037491 (TRIP13)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
129037491 (TRIP13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
AAA_18
Viral_helicase1
AAA_14
AAA_28
AAA_33
AAA_5
AAA_25
TsaE
NPHP3_N
Cytidylate_kin
IstB_IS21
RuvB_N
RNA_helicase
ATPase_2
DUF815
AAA_11
AAA_24
AAA_7
ABC_tran
AAA_17
NACHT
AAA_30
AAA_RNF213_4
TIP49
ATPase
bpMoxR
PhoH
Mg_chelatase
PduV-EutP
AAA_19
NRBF2
Rad17
SLFN-g3_helicase
nSTAND1
nSTAND6
NB-ARC
AAA_3
Motif
Other DBs
NCBI-GeneID:
129037491
NCBI-ProteinID:
XP_054345657
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All DBs
Position
4:857303..879473
Genome browser
AA seq
432 aa
AA seq
DB search
MDEAVGDLKQALPCVAESPTVHVEVHQRGSSTAKKEDINLSVRKLLNRHNIVFGDYTWTE
FDEPFLTRNVQSVSIVDTELKVKDSQPIDLSACTVALHIFQLNEDGPSSENLEEETENII
AANHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVNSNLITWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLI
DDKDALVFVLIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSN
ITEKIDVAFVDRADIKQYIGPPSVAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLLLNEISRKSEGLSGRVLRKLPFLAHALYVQAPTVTIEGFLQALSLAVDK
QFEERKKLAAYI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccgtgggcgacctgaagcaggcgcttccctgtgtggccgagtcgccgacc
gtccacgtggaggtgcatcagcgcggcagcagcactgcaaagaaagaagacataaacctg
agtgttagaaagctactcaacagacataatattgtgtttggggattacacatggactgag
tttgatgaaccttttttgaccagaaatgtgcagtctgtgtctattgttgacacagaatta
aaggttaaagactcacagcccatcgatttgagtgcatgcactgttgcacttcacatcttc
cagctgaatgaagatggccccagcagtgaaaatctggaggaagagacagaaaacataatt
gcagcaaatcactgggttctacctgcagctgaattccatgggctttgggacagcttggtg
tatgatgtggaagtcaaatcccacctcctcgattatgtgatgacaactttactgttttca
gacaagaacgtcaacagcaacctcatcacctggaaccgggtggtgctgctccacggtcct
cctggcactggaaagacatccctgtgtaaagcgttagcccagaaattgacgattagactt
tcgagcaggtaccgatatggccaattaattgaaataaacagccacagcctcttttctaag
tggttttcggaaagtggcaagctggtaaccaagatgtttcagaagattcaggatttgatt
gatgataaagacgctctggtgttcgtgctgattgatgaggtggagagtctcacagccgcc
cgaaacgcctgcagggcgggcaccgagccatcagatgccatccgcgtggtcaatgctgtc
ttgacccaaatcgatcagattaaaaggcattccaatgtcgtgattctgaccacttccaac
atcactgagaagatcgacgtggccttcgtggacagggctgacatcaagcagtacattggg
ccgccctctgtagcagccatcttcaaaatctacctctcttgtttggaagaactgatgaag
tgtcagatcatataccctcgccagcagctgctgaccctccgagagctggagatgatcggc
ttcattgaaaacaacgtgtcaaaattgagccttcttttgaatgaaatttcaaggaagagc
gaaggcctcagcggccgggtcctgagaaaactcccctttctggctcatgcgctgtatgtc
caggcccccaccgtcaccatagaggggttcctccaggccctatctctggcagtggacaag
cagtttgaagagagaaagaagcttgcggcttacatctga
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