Pongo pygmaeus (Bornean orangutan): 129037546
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Entry
129037546 CDS
T10128
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X2
KO
K24155
rabconnectin-3a
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129037546 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyg04131
]
129037546 (DMXL1)
Membrane trafficking [BR:
ppyg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129037546 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
129037546 (DMXL1)
RAVE complex
129037546 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
129037546
NCBI-ProteinID:
XP_054345764
LinkDB
All DBs
Position
4:123413229..123599149
Genome browser
AA seq
3027 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSIGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVISIFEPVNLPKQKKNLELYSQWQKSGQFFLESIAHNITWDP
TGSRLLTGSSYLQLWSNTNLEKPTEDENLNKTDLNFGDWRCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTAVTSPDGSSEKQSQGEIDFSFVYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCSHWTESINLTNNFKRNA
SSKERVQNALEVNLRHFRRGRRRSLALVAHTGYLPHQQDPHHVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLNENEEKTGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP
SSEASVEDSNQADVKSDEETDDGVDDLKINPEKKELGRDKMVPNSSFTSLSSAAIDHQIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIMMYACTKNVDLAIQQGKQKPSGLTRSTSMLISSGHNKSSNSLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPDVDNPKQPFDALNIEECSLTQQNKSAVDVAFQDPSAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK
KLLSELSNPEISKYVGEVFNIVSQQSTARPGCIIALDPITKLHGRKTQLLHVFQEDFILN
NLEKKSLGKDSILSNAGSLPNGFSEKFYLIVIECTQDNRSLLHMWNLHLKSVPVSLDEKV
DTKLSEAVWPPEELYSSSPEKILSPFSQKYQTCRANLQSTSKLTLFSEMVYSQELHLPEG
VEIISIKPSAGHLSSSSIYPACSAPYLLATSCSDEKVRFWRCRVTDGESATSKNGKIDLA
YIWEEWPLLIEDGLQSNSSITVPGRPVEVSCAHTNRLAVAYKQPASNSRSSQDFVMHVSI
FECESTGGSCWVLEQTIHLDELSTVLDSGISVDSNLVAYNKQEMYLSSKENITSNTKHLV
HLDWMSREDGSHILTVGIGSKLFMYGPLAGKVQDQTGKETLAFPLWESAKVVPLSKFVLL
RSVDLVSSVDGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVITDSYSGSTP
SITSLIKQSNSSSGLHPPKKTLTRSMTSLAQKICGKKTALDPSVDMEDSGLFEAAHVLSP
TLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAESNHERRLRSLTISASG
STTRDPQAFNKAENTDYTEIDSVPPLPLYALLAADDDSCYSSLEKSSNESTLSKSNQLSK
ESYDELFQTQLLMTDTDMLETDEENTKPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLPG
LSRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPAY
RAQLLHQGLSTSHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRNTRILRK
CIEKVAKAAFYRKNDPLDAAIFYLAMKKKAVIWGLYRAEKNTRMTQFFGHNFEDERWRKA
ALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDVQLALVIARLYESEFDTSAA
YKSILRKKVLGIDSPDSELCSLNINMHHDPFLRSVAYWILEDYSGALETLIKQPIRENDD
QVLSSCNPTVFNFYNYLRTHPLLLKRHFGSSDTFSTHMSLTGKSGLAGTINLSERRLFFT
TASAHLKAGCPMLALEVLSKMPKVIKKTRPFYRASGFLDTSKDCSPSSPLKLDAREDKSS
AIDWSQSLINGFGSSSEGSSEKQSNSTLSFDWSQPSVVFQDDSLELKWDSDNDEEDEDVP
ISMKELKPLQRKTDKKLDDISSNYTESFSTLDENDLLNPSEDIIAVQLKFRACLKILTVE
LRTLSTGYEIDGGKLRYQLYHWLEKEVIALQRTCDFCSDAEELQSAFGRNEDEFGLNEDA
EDLPHQTKVKQLRENFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQE
SQQETSEPLFSSPLSEQTSVPLLFACTANAKTVVANPLLHLSNLTHDILHAIVNFDSPPH
PDIQSNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMVYQTVLLPHRHSLKTGS
LDEALTPNTSPAQWPGITCLIRLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLATHSS
NELFRIVAHPLNEKMWSAVFGGGAHVPSKEQTHSKTLPVSSLVEEGEKQNKRFRPSKMSC
RESAPLTPSSAPVSQESLAVKEKFIPPELSIWDYFIAKPFLPPSQSRAEYDSEESLGSDD
DDDDDDDDVLASDFHLQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSS
PLCHAVLKTLQCWEQVLLRRLEIHGGPPQNYIASHTTEESLSAGPAILRHKALLEPTNTP
FKSKHHLALSVKRLWQYLVKQEEIQETFIKNIFTKKRCLNEIEADLGYPGGKARIIHKES
DIITAFAVNKANRNCIAIASSHDVQELDVSGILATQVYTWVDDDIEVETKGSEDFLVIHA
RDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMIKKAINNVRRMTSHPTLPYYL
TGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFNYQGNKFGIVDADGYLSLYQTNWKC
CPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLSTDNRNVCLWDTLVAPANSLVH
AFTCHDSGATVLAYAPKHQLLISGGRKGFTYVFDLCQRQQRQLFQSHDSPVKAIAVDPTE
EYFVTGSAEGNIKIWSLSTFGLLHTFVSEHARQSIFRNIGTGVMQIETGPANHIFSCGAD
GTMKMRILPDQFSPLNEVLKNDVKFML
NT seq
9084 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgaccggggctgtgaaccctggcgaccactgcttctccgtg
ggcagcattggcgaccagcgcttcacggcttatgcatctggatgtgacattgtaatactg
ggaagcgattttgaaagattacagataatcccaggagctaaacatggaaatattcaagtg
ggatgtgtagactgttcaatgcaacaaggcaagattgcagcatcttatggaaatgttatc
tccatttttgaaccagttaacctaccgaaacaaaagaaaaatttggaattatatagtcag
tggcagaaaagtggccaattttttctggaatcaatagcacacaatataacctgggatccc
acaggcagtcgtcttttaactggttccagctatttgcagctctggtccaatactaacttg
gagaagccaactgaagatgaaaatttaaataaaacagatcttaactttggagattggaga
tgcatttggcattgcaaaactgcttcccaagttcatttaatgaaattttcaccagatgga
gaattttttgccactgctgggaaggatgactgtcttttgaaggtatggtataatgtagaa
aactggcggacagctgttacttctccagatggaagttcagaaaaacaatcccaaggagaa
attgacttttcttttgtgtatctggcccatcctcgagcagtaaatggattttcctggcgt
aaaacaagcaaatatatgcctagggcttctgtatgtaatgtactgttgacttgctgcaaa
gataatgtgtgtcgtctttgggtagagacatttttaccaaatgattgtttgctatacggc
ggtgactgcagccattggactgaatcaattaatttaacaaataacttcaagagaaatgct
tccagtaaagaacgagttcaaaatgctttagaagtaaatctgagacattttcgtagaggt
cggaggagatcacttgcactggtagcacatacgggatatctgccacatcagcaggatcct
catcatgttcacaggaacactccactgcatgccaatgcactttgccactttcatattgca
gccagcatcaacccagccacagacattccacttcttccatctattacatctctgagtcta
aatgaaaatgaagagaagactggaccttttgttgtacactggctaaacaataaagaactg
cattttactttgtccatggaagtttttttacagcaacttagaaaaagttttgaacaacca
tcttctgaagccagtgtagaagattctaatcaggcagatgtaaaatctgatgaagaaacg
gatgatggtgttgatgatctgaaaataaatcccgaaaagaaggaattaggccgtgataaa
atggtaccaaactcaagttttacgtcattatcgtcagctgccattgatcatcagattgaa
gtacttctgtctgaatggagtaaaaatgcagatatgctctttagtattcatcccatggat
ggttctttgctagtttggcatgtggattggctggatgaataccagcctggtatgtttcgt
caagtacaggtgtcctttgtttccagaattccagtagctttccccacaggtgatgcaaac
tctctctgtaaaagcataatgatgtatgcctgtaccaagaatgttgacttggctattcag
caggggaaacaaaaaccttctggcctcacccgttccacgtcaatgcttatttcttctggt
cacaataaatcatctaatagtttaaaattaagtatttttacccctaatgttatgatgatt
tcaaaacacgctgatggttctctgaatcagtggctggtcagttttgccgaggaatctgct
ttttctactgttctcagtatttcccacaaatccagatattgtggtcatcgttttcacctt
aatgatttagcttgccactcagtattaccattattgctgacaacatcacaccataatgca
ttaaggacaccagatgtcgataacccaaagcaaccatttgatgctctaaatattgaagaa
tgctctttgacacaacaaaataaaagcgctgttgacgtggcatttcaggatcccagtgca
gtttacagtgagcttattctttggagggttgacccagttgggccattgtctttttctgga
ggagtttctgagctcgcccggattaattctcttcatgtttctgccttttccaatgtggca
tggctgcccactcttatacccagttattgtctgggtgcatactgcaactctcctagtgca
tgctttgtagccagtgatggacaatatctgagattatatgaagcagttattgatgctaag
aaacttttatctgagctttctaaccctgaaatttctaaatatgttggtgaagtctttaac
atcgtcagtcaacaatcaacagccaggccaggatgcattattgcattagatcccattacc
aaacttcatggcagaaaaacccaactgcttcatgtttttcaagaagacttcattttgaat
aaccttgagaagaaaagccttggcaaagacagcattttatctaatgcaggcagcttacct
aatggattttctgagaagttctacctaattgtaatagaatgcactcaagacaaccgttca
ctgttacacatgtggaatttacatctaaagtcagttcctgtctcattagatgaaaaagta
gatacaaaattatccgaagcagtttggcccccagaagaactttattcttcttctccagag
aagatcctatctcctttttcacaaaagtatcagacttgcagagcaaatctccagagtacc
agcaagttgactctgttttcagaaatggtttatagccaagaattgcatttaccagaagga
gttgagataataagtattaagccatcagcaggacatctgagttcatcttctatatatcct
gcatgcagtgctccttatttattggcaacttcatgttcagatgagaaagtaagattctgg
agatgcagagtaacagatggagaatctgccacatcaaagaatggaaaaattgatcttgca
tacatttgggaagaatggccattacttattgaagatggacttcagagcaatagtagtata
actgtacctggtaggcctgtagaagttagctgtgcacatacaaatcgtttagcagtagct
tataagcagcctgcatctaatagtagatcttcccaggactttgtgatgcatgtaagtatt
tttgaatgtgagtcaacaggaggttcatgttgggtccttgaacagacaattcatttagat
gagttaagcacagtattggattctggcattagtgttgatagcaatttagtggcctataat
aaacaagagatgtatttatctagtaaagagaatatcacatcaaacacaaagcatttagtt
cacttagattggatgtctagagaagatggttctcatatcctgactgtaggaattggatca
aaactttttatgtatggacccctggctggcaaggtacaagaccaaactggtaaggaaacc
ctggcatttcctctctgggagagtgccaaagttgtgcccctttctaaatttgtactatta
cgaagtgtggacctggtttcttctgtagatggctccccaccttttcctgtttctttatcg
tgggtccgggatggcatccttgtggtaggaatggactgtgaaatgcatgtgtattcccaa
tggcagccatcttctaaacaagaacctgttataacagattcgtacagtgggagcactcca
tctataacaagtttaataaaacagagtaactccagttctgggttacatcctccaaagaaa
actctgactcgatccatgaccagtcttgcacagaaaatctgtggaaagaagactgcattg
gatccttcagtggatatggaagattcaggtctttttgaagcagctcatgtactttccccg
actctacctcagtatcatcccttgcagcttttggaactcatggatcttggtaaagttcgg
agagccaaggccatcttgtcccatcttgttaagtgcattgctggggaagttgtggctctg
aatgaagctgaatctaatcatgaacgccgccttaggtctctcacaatcagtgctagtgga
agcactaccagagacccccaggcattcaataaggctgaaaatacagattacacagaaata
gattctgttcctccacttcctttatatgccttacttgcagcagatgatgatagctgttac
tcatctttggagaaatctagtaatgagagtaccttaagtaaatcaaaccaattatcaaaa
gaaagttatgatgagctttttcagactcaacttctaatgactgatactgatatgttagag
acagacgaagaaaatacaaagcctagagttattgacctttcacaatacagcccgacttac
tttggacctgagcatgctcaggttctttctggccacttacttcattctagtttaccagga
ctcagccggatggagcagatgtctttgatggccttagcagatacaattgcaactacaagc
actgatattggagaaagccgagacagaagccaaggtggagaaactcttgatgaatgtggg
ttaaaatttcttttggctgttcgactccatacctttcttacaacttcccttccagcctat
cgagctcaactccttcaccaaggcctgtctacaagtcattttgcttgggcatttcactca
gtagcagaagaagaactgctgaacatgttgccagccatgcagaaagatgatcccacttgg
tctgaactaagagctatgggtgtggggtggtgggtccggaatacccgcatcttacgcaaa
tgcatagaaaaagtagctaaagcagccttttatagaaagaatgatcctttagatgctgcc
attttttaccttgcaatgaaaaagaaagctgtgatttggggattatatagagctgaaaaa
aacaccaggatgacacagttttttggacacaattttgaggatgagaggtggcgtaaagca
gctttaaagaatgctttttctttgctaggcaaacaaagatttgaacattctgcagcattt
tttcttttagctggttgcctcagagatgcaattgaggtatgtcttgagaaattgaatgac
gttcagttggctcttgtaatagcaagactctatgagtctgaatttgatacatctgcagca
tataaatctattttacgtaaaaaagttttgggaatcgattctcctgacagtgaactgtgt
tcattgaacataaatatgcatcacgatccttttcttcggagcgtggcatattggattttg
gaagattatagtggtgctctggaaacattaataaagcaacctatcagagagaatgatgat
caagttttatcatcctgtaatcctacagtttttaatttctacaattatctgagaacacat
cctcttttgctgaaacgtcattttggatcatctgatacattttccacacatatgagtcta
acaggaaaaagtggactggcaggaacaattaatttaagtgaaagacgattattttttacc
actgccagtgctcatttaaaagctggctgcccaatgttggctttggaagtattatcaaag
atgcctaaagtcatcaagaaaacaagacctttttatagagcttctggttttctggatact
agtaaagactgttctccttcttctccattaaagttggatgcaagggaagataagtcttct
gctattgattggtcacagtcactgataaatggttttggatcttcttcagagggttcctca
gagaagcaatcaaactccactctttcttttgactggagccaaccaagtgttgtgtttcag
gatgactctttagagttaaaatgggacagtgataatgatgaagaagatgaggatgtccct
atttcaatgaaagaactaaaacctttacagagaaaaacagataaaaaattggatgacata
agttctaactacacagaatctttcagcacactagatgaaaatgaccttttaaatccatca
gaagatataattgcagttcagttaaaatttagagcgtgtttaaagattctcacagtagaa
cttcgtactttatctaccggctatgaaatagatggtggaaaattgcgttaccaactatac
cactggcttgaaaaagaggtgatagctcttcagaggacttgtgacttttgctcagatgct
gaagaactacagtctgcatttggcagaaatgaagatgaatttggattaaatgaggatgct
gaagatttgcctcaccaaacaaaagtgaaacaactgagagaaaattttcaggaaaaaaga
cagtggctcttgaagtatcagtcacttttgagaatgtttcttagttactgcatacttcat
ggatcccatggtgggggtcttgcatctgtaagaatggaattgattttgcttttgcaagaa
tctcagcaggaaacatcagaaccactgttttctagccctctgtcagagcaaacctcagtg
cctctcctctttgcttgtacagccaatgccaaaacagtagttgccaatccattattgcac
cttagtaatctgacacatgatattcttcatgccatagtaaactttgattcaccaccccac
cctgatatccaaagcaataaagtgtatgtaatgcatactttagcagcctcactttctgct
tgtatttatcagtgcctttgtggtagtcataactacagttcatttcaaacaaatcagttt
actggaatggtatatcagacagtactgcttcctcatcgacattctttgaaaacaggaagc
ttagatgaagcattaactcccaatacatcaccagctcaatggccaggaataacttgtcta
attcgacttttgaattcttctggcgaggaagcccagtcagggcttacagtcttgctctgt
gaaattctcacagcagtgtatcttagtctcttcatccatggcctggccacacattcaagt
aatgagctatttcggattgtggcccatcctctaaatgagaaaatgtggtctgctgtattt
ggtggaggtgcacatgttcctagcaaagaacagacacattcaaaaactttacctgtttct
tcactagttgaagaaggagaaaaacagaacaaacgttttaggccgtcaaaaatgtcttgc
agagaatctgccccactgaccccttcctcagcaccagtaagccaggagtcactggcagtt
aaagaaaagttcatcccacctgagctcagtatctgggactatttcatagctaagcctttt
ctacccccttctcaaagtagagccgaatatgattcagaggagagtctgggaagtgatgat
gatgacgatgatgatgatgatgatgttttagcatcagatttccatctccaggaacattct
aattcaaattcatatagttggtccttgatgcggttggcgatggtgcaattggtactcaac
aatttgaagactttttatccctttgcaggtcatgatcttgcagagcttccagttagttca
cctctttgtcatgcggttctaaaaactcttcaatgttgggaacaagttcttctccgacga
cttgaaattcatggtgggccacctcaaaattatatcgcaagtcataccaccgaagagagt
ttgtctgcaggtcctgcaattcttcgccacaaagctttactggaacctacaaacactcct
ttcaaatccaaacaccatctggcactgtctgtgaagaggctttggcagtatttggtgaag
caggaagaaattcaggaaacctttatcaaaaatatattcacaaagaaacggtgtctaaat
gagatagaagcagatttgggatatcctggaggtaaagcaagaattattcataaggaatct
gatatcattactgcatttgctgttaataaggcaaatagaaactgcatagcaatcgcttcc
agtcatgatgttcaagaactggatgtttctggaattctggccacacaggtctacacttgg
gtagatgatgatatagaagtggaaaccaaaggatcagaagatttcttggttatacatgct
cgtgatgatttaacagctgttcaaggtacaactccatatacacatagcaatcctggcact
ccaatcaacatgccatggcttggtagtacacagactggcagaggagcatctgtgatgatt
aagaaagccattaataatgttagaagaatgacttctcatccaactcttccttactatctg
acaggagctcaagatggaagtgtcagaatgtttgaatggggccattctcaacaaataacc
tgttttcgatctggtggcaattcaagagttacaagaatgagatttaactatcagggaaat
aagtttggaatagttgatgctgatggatatttaagtttgtatcaaacaaactggaaatgt
tgtccagttactggaagcatgcctaagccatacctgacttggcagtgtcataacaaaaca
gccaatgattttgtcttcgttagttcctcctctctgatagctacagctggtctttcaact
gacaatagaaacgtatgtttgtgggatactcttgtagcacctgccaatagtttagtccat
gcatttacctgccatgacagtggagccacagttttagcatatgctccaaaacatcagcta
ctaatatcaggtggcagaaaaggttttacatatgtatttgacctttgtcaacgacaacag
aggcagcttttccagagccatgattctcctgttaaagccattgctgttgatccaactgaa
gagtactttgttacaggatctgccgaaggcaatataaagatttggagtctctctaccttt
ggtctgctccatacttttgtcagtgaacatgctcggcagtccatttttagaaatattgga
actggagtgatgcaaattgagacagggcctgcaaatcacattttctcctgtggagctgat
ggaacaatgaaaatgagaatactgccagatcagtttagccctttaaatgaagtgttgaaa
aatgatgtgaaatttatgctataa
DBGET
integrated database retrieval system
