Pongo pygmaeus (Bornean orangutan): 129037552
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Entry
129037552 CDS
T10128
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg01524
Platinum drug resistance
ppyg03430
Mismatch repair
ppyg05200
Pathways in cancer
ppyg05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129037552 (MSH3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129037552 (MSH3)
09162 Cancer: specific types
05210 Colorectal cancer
129037552 (MSH3)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
129037552 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129037552 (MSH3)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129037552 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Spectrin_Dys-1
Motif
Other DBs
NCBI-GeneID:
129037552
NCBI-ProteinID:
XP_054345779
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Position
4:84348191..84579881
Genome browser
AA seq
1125 aa
AA seq
DB search
MSRRKPASGGLAASSSAPARQAVLSRFFQSTGSLKSTSSSTGAADQVDPDAAAPPAPTFP
PQLPPHVATEIDRSKKRPLENDGPVKKKVKKVQQKEGGSDLGMSGNSEPKKCLRTRNVLK
SLEKLKEFCCDSALPPNRVQTESLQERFAVLPKCTDFDDISLLHAKNAVSSEDLKCQINQ
KDTTLFDLSQFGSSNTSHENLQKTASKPANKRSKSIYTPLELQYIEMKQQHKDAVLCVEC
GYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTET
AALKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKLDDAVNVDEIMTDTSTSYLLCIS
ENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAARSELETRMSSLQPVELLLPSAL
SEQTEALIHRTTSVSVQDDRIRVERMDNIYFEYSHAFQAVTEFYAKDTVDIKGSQIISGI
VNLEKPVICSLAAIIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQT
DMKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIE
NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLYHLKSEFQAIIPAVNSHIQSDLLRTVI
LEIPELLSPVEHYLKILNEQAAKVGDKTELFKDLSDFPLIKKRKDEIQGVIDEIQMHLQE
IRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHL
NQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTVQ
EERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALI
TIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLV
ILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGF
LVSEDASKLDPGAEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKE
LEGLINTKRKRLKYFAKLWTMHNAQDLQKWTEEFEMEETQTSLLH
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccggaagcctgcgtcgggcggcctcgctgcctccagctcagcccctgcgagg
caagcggttttgagccgattcttccagtctacgggaagcctgaaatccacctcctcctcc
acgggtgcagccgaccaggtggaccctgacgctgcagcgcccccagcgcccactttcccg
ccccagctgccgccgcacgtagctacagaaattgacagaagtaagaagagaccattggaa
aatgatgggcctgttaaaaagaaagtaaagaaagtccaacaaaaggaaggaggaagtgat
ctgggaatgtctggcaactctgagccaaagaaatgtctgaggaccaggaatgttttaaag
tctctggaaaaattgaaagaattctgctgcgattctgcccttcctccaaatagagtccag
acagaatctctgcaggagagatttgcagttctgccaaaatgtactgattttgatgatatc
agtcttctacatgcaaagaatgcagtttcttctgaagatttgaaatgtcaaattaatcaa
aaggacacaacactttttgatctcagtcagtttggatcatcaaatacaagtcatgaaaat
ttacagaaaactgcttccaaaccagctaacaaacggtccaaaagcatctatacgccgcta
gaattacaatacatagaaatgaagcagcagcacaaagatgcagttttgtgtgtggaatgt
ggatataagtatagattctttggggaagatgcagagattgcagcccgagagctcaatatt
tattgccatttagatcacaactttatgacagcaagtatacctactcacagactgtttgtt
catgtacgccgcctggtggcaaaaggatataaggtgggagttgtgaagcaaactgaaacc
gcagctttaaaggccattggagacaacagaagttcactcttttcccggaaattgactgcc
ctttatacaaaatctacacttattggagaagatgtgaatcccctaatcaagctggatgat
gctgtaaatgttgatgagataatgactgatacttctaccagctatcttctgtgcatctct
gaaaataaggaaaatgttagggacaaaaaaaagggcaacatttttattggcattgtggga
gtgcagcctgccacaggcgaggttgtgtttgatagtttccaggactctgctgctcgttca
gagctagaaacccggatgtcaagcctgcagccagtagagctgctgcttccttcggccttg
tccgagcaaacagaggcgctcatccacagaaccacatctgttagtgtgcaggatgacaga
attcgagtcgaaaggatggataacatttattttgaatacagccatgctttccaggcagtt
acagagttttatgcaaaagatacagttgacatcaaaggttctcaaattatttctggcatt
gttaacttagagaagcctgtgatttgctctttggctgccatcataaaatacctcaaagaa
ttcaacttggaaaagatgctctccaaacctgagaattttaaacagctatcaagtaaaatg
gaatttatgacaattaatggaacaacattaaggaatctggaaatcctacagaatcagact
gatatgaaaaccaaaggaagtttgctgtgggttttagaccacactaaaacttcatttggg
agacggaagttaaagaagtgggtgacccagccactccttaaattaagggaaataaatgcc
cggcttgatgctgtatctgaagttctccattcagaatctagtgtgtttggtcagatagaa
aatcatctacgtaaattgcccgatatagagagaggactctgtagcatttatcacaaaaaa
tgttctacccaagagttcttcttgattgtcaaaactttatatcacctaaagtcagaattt
caagcaataatacctgctgttaattcccacattcagtcagacttgctccggaccgttatt
ttagaaattcctgaactcctcagtccagtggagcattacttaaagatactcaatgaacaa
gctgccaaagttggggataaaactgaattatttaaagacctttctgacttccctttaata
aaaaagaggaaggatgaaattcaaggtgttattgacgagatccaaatgcatttgcaagaa
atacgaaaaatactaaaaaatccttctgcacaatatgtgacagtatcaggacaggagttt
atgatagaaataaagaactctgctgtatcttgtataccaactgattgggtaaaggttgga
agcacaaaagctgtgagccgctttcactctccttttattgtagaaaattacagacatctg
aatcagctccgggagcagctagtccttgactgcagtgctgaatggcttgattttctagag
aaattcagtgaacattatcactccttgtgtaaagcagtgcatcacctagcaactgttgac
tgcattttctccctggccaaggtcgctaagcaaggagattactgcagaccaactgtacaa
gaagaaagaaaaattgtaataaaaaatggaaggcaccctgtgattgatgtgttgctggga
gaacaggatcaatatgtcccaaataatacagatttatcggaggactcagagagagtaatg
ataattaccggaccgaacatgggtggaaagagctcctacataaaacaagttgcattgatt
accatcatggctcagattggctcctatgttcctgcagaagaagcgacaattgggattgtg
gatggcattttcacaaggatgggtgctgcagacaatatatataaaggacggagtacattt
atggaagaactgactgacacagcagaaataatcagaaaagcaacatcacagtccttggtt
atcttggatgaactaggaagagggacgagcacccatgatggaattgccattgcctatgct
acacttgagtatttcatcagagatgtgaaatccttaaccctgtttgtcacccattatccg
ccagtttgtgaactagaaaaaaattactcacaccaggtggggaattaccacatgggattc
ttggtcagtgaggatgcaagcaaactggatccaggcgcagaagaacaagtccctgatttt
gtcaccttcctttaccaaataactagaggaattgcagcaaggagttatggattaaatgtg
gctaaactagcagatgttcctggagaaattttgaagaaagcagctcacaagtcaaaagag
ctggaaggattaataaatacgaaaaggaagagactcaagtattttgcaaagttatggacg
atgcataatgcacaagacctgcagaagtggacagaggagttcgaaatggaagaaacacag
acttctcttcttcattaa
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