Pongo pygmaeus (Bornean orangutan): 129037932
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Entry
129037932 CDS
T10128
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X2
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppyg04121
]
129037932 (SHPRH)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129037932 (SHPRH)
Ubiquitin system [BR:
ppyg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129037932 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
TPR_12
TPR_10
Motif
Other DBs
NCBI-GeneID:
129037932
NCBI-ProteinID:
XP_054346275
LinkDB
All DBs
Position
5:complement(146300061..146379784)
Genome browser
AA seq
1683 aa
AA seq
DB search
MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHCITLSDS
LKEEVAHRDKKRCSKVVSFSKPIEKEETVGIFSPLSVKLNIVISPYHFDNSWKAFLGELT
LQLLPAHSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS
FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQL
MKKVMEKLHNSIIPDVLEEDEDDPESEPEGQDIDELYHFVKQTHQQETRSIQVDVQHPAL
IPVLRPYQREAVNWMLQQECFRSSPATESALHFLWREIVTSEGLKLYYNPYTGCIIREYP
NSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHYFGGK
LKETEIQNIEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNR
SLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKETRK
SGNKDTDSEYLPSNTSDDDDDPYYYYCKSRRNRSKLRKKLVPSTKKGKSQPFINPDSQGH
CPATSDSGITDVAVSKSTCISEFNQEYETEDCAESLNPADSDVPPSNTMSPFNTSDYRFE
CICGELDQIDRKPRVQCLKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVSTRATLI
ISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELN
YVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSG
INRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKIL
WRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKLS
SLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAH
RQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLI
ARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSP
WWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEEL
NKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSN
TVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSLKAILSFAKSHRFDVEFVDE
GSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHII
EPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGVNPEPCPICARQLG
KQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSEKANQEE
DIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISR
VKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHR
IGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSSAKHSEASVLTVADLADLFTKETE
ELE
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgacggaaacgtgctcctccagtgagggtagatgaggaaaagaggcagcag
cttcattggaatatgcatgaggacagaaggaatgaacctatcatcataagtgatgatgac
gagcagccctgcccaggttcagatacctcttctgctcattgcatcactctaagtgatagt
ctaaaggaagaagtggctcacagagataagaagaggtgttcaaaagtggtgagcttctca
aaaccaattgaaaaagaagagactgttggtattttttcccctttgtctgtaaagttgaat
attgtgatttctccctatcactttgataattcctggaaagcatttctaggagaattaact
cttcagcttcttcctgcgcacagtttaattgaaaatttttccgaaaggagtattaccttg
atgagttcagagtcaagcaatcagttcctgatttatgttcattcaaaaggtgaagatgta
gagaaacaaaaaaaagaaccaatgagtatttgtgacaagggtattctagtggagtcatcc
ttcagtggtgaaatgttagaagatttggggtggctacaaaagaagagaagaataaaactc
tatcagaaaccagaaggaaatcacattatcaaggttggaatttatcttttggaagctggc
ctagcaaaactagacttcttgagtgatgcaaattcaagaatgaaaaagttcaatcagctc
atgaagaaagtaatggaaaagttacacaattctattattccagatgtgttggaagaggat
gaagatgatccggagagtgagccagagggacaagacattgacgaactgtatcactttgtg
aaacaaacacatcagcaagaaacacggtccatccaagtggatgtccagcatcctgcattg
atccctgtgttgagaccctaccaaagagaggctgtcaattggatgctacaacaagagtgt
ttcagaagcagtcctgctactgaaagtgccctgcacttcttatggcgagagattgttaca
tctgagggtctgaaactctactataatccatatacaggctgcatcattcgtgagtaccca
aattctgggccgcagttgcttggtggaattttagcagatgagatgggtcttggaaagaca
gtggaggttttggctctgattctgacacatactcgacaagatgtcaagcaagatgctctc
actcttcccgagggaaaagtggtgaattattttattccatcacattattttggaggaaaa
ctgaaagagacagaaatccagaatatcgaatttgaaccaaaagaaaaagttcaatgccct
cctacacgtgtgatgatcctgacagctgtgaaagaaatgaatggaaaaaaaggagtgtcc
atcctttccatctataagtatgtcagttctatatatagatacgatgttcaacggaacagg
agtcttttgaaacggatgctgaaatgtttaatttttgaaggtctcgtgaaacagatcaaa
ggccatggtttttctgggacttttacattgggaaagaattacaaggaagaggatatatgt
gataaaacaaaaaagcaggcagtagggagtccaaggaaaattcagaaagaaactagaaaa
tcagggaacaaggacacagattctgaatacttgccatcaaacacctctgatgatgatgat
gatccttactattattattgtaagtccaggagaaatcgtagtaaattgaggaaaaagctt
gttccatccacaaaaaaaggaaaaagtcaaccatttatcaatcctgattcacaaggtcac
tgtccagctactagcgactctggaataactgatgttgctgtgtctaaaagtacatgtatc
tctgaattcaaccaagaatatgaaacagaggactgtgctgaatctctaaatcctgctgat
agtgatgtaccaccttctaataccatgagtccctttaacacctctgattaccgctttgag
tgcatatgtggtgaacttgatcagatagatcgtaagcctcgcgttcagtgcctgaagtgt
cacctgtggcaacatgcaaagtgtgtgaattatgatgagaaaaatctgaagatcaagcct
ttttactgcccccactgccttgttgcaatggaaccagtgtcaacaagagcaactctgatc
atctctccaagttccatctgtcaccagtgggtggatgagatcaacaggcacgtgaggtcg
tcatcgcttcgagtcttggtatatcaaggagtgaagaaagatggctttttacaacctcat
tttttggcagaacaggatatagttatcatcacctatgatgtactgcgttcagaattaaat
tatgtcgatatcccacatagcaatagtgaggatgggcgtcgcctacggaatcagaagcgg
tatatggctatcccgagccccctcgtagctgtggagtggtggaggatctgccttgatgaa
gctcagatggttgagtgtcccacagtaaaagctgcagaaatggcccagcgtttgagtggg
attaatcgatggtgtatcagtggcactccagtacagagaggattagaggatctttttggg
ttagtggtctttcttggtattgaaccttactgtgtcaaacactggtgggttcgacttctc
tatcggccttactgcaagaagaatcctcagcatctctacagctttattgccaagatactg
tggaggtctgcaaagaaagatgtgattgaccaaatccaaataccaccacaaaccgaagaa
atacactggctccacttttctccagtggaaaggcatttctatcaccgtcagcatgaggtg
tgctgccaggatgcggtggtaaaactcaggaagatttctgactgggctctgaagctcagc
agcctggacagaaggactgtcacctctatcctgtatccattgctgaggctcagacaggcc
tgctgtcacccacaggctgttcgtggagagttcttgccactccaaaaaagcaccatgaca
atggaagagctgctgacatctttgcagaagaaatgtggaactgaatgtgaagaagcacat
cgacagctagtttgtgctctcaatggcttagcaggcattcatattattaaaggtgagtat
gccttggcagcagaattgtacagagaagtgttgcgctcttcggaggaacacaaaggaaaa
ctcaaaactgattcacttcaaagacttcatgctacccataacttgatggaattgttgata
gccaggcacccagggataccacctaccttgcgtgatggccgacttgaggaagaggccaaa
cagctgcgagagcactatatgagcaaatgtaatacagaagttgctgaagcccagcaagct
ttatatcctgtgcagcagaccatccatgagcttcaaagaaagattcattctaattctcct
tggtggctaaatgtgatccacagagcaatagaatttactattgatgaggagctagttcag
cgagtgcgaaatgaaataaccagcaactacaagcaacaaactggcaagctttctatgtca
gagaagttccgtgattgcagaggtcttcagttcttacttacaacacaaatggaagagcta
aataaatgccagaagctagtaagagaggctgtaaaaaacctggagggacctccatctcgt
aacgttattgagtctgcaacagtctgccacctccgaccagccagacttcctctgaactgc
tgtgtcttttgtaaagctgatgaattgttcacagagtatgaatcaaagctattttccaac
acagtcaaaggccagactgcaatatttgaggagatgatagaagatgaagaaggactggtg
gatgatcgagcacctaccaccacccggggtctctgggcaataagtgagacagagcgatct
ctgaaagcaatactatcatttgcaaaatcacataggtttgatgttgaatttgttgatgaa
ggaagcacttcaatggatctctttgaagcatggaagaaggaatataagttgcttcatgaa
tattggatggctctgaggaatcgtgtgtctgctgttgatgaacttgcaatggctacagaa
cgactaagagtgcgtgatcctagggagccaaagcctaatccgcctgttcttcatatcatt
gaaccacatgaggtagaacaaaaccgaataaaactactaaatgataaagccgttgctaca
tcacagcttcagaaaaaacttgggcagcttctttacctaactaatttggagaagtctcaa
gataaaacatcgggaggtgttaatccagaaccttgtccaatctgtgctcgacagctagga
aaacagtgggcggtactgacctgtggtcactgtttctgtaatgaatgcatttctataatt
attgaacaatacagcgtgggatctcacagaagctccattaagtgtgcaatctgccgccag
accacatctcacaaagaaatctcgtatgtgtttacctcagaaaaagcaaaccaggaggag
gacatccctgtgaagggcagccattctacaaaagtggaagctgtggtcagaactctgatg
aaaatacagcttagagatccaggggccaaagcactcgttttctcaacgtggcaagatgta
ttagatattatttcaaaagctctcactgacaacaacatggaatttgcacaaatcagtcgt
gtgaagacatttcaggagaacctttcagcatttaaacgtgatccccaaatcaatattttg
ctgctgcccctgcacacaggttctaatggattaactatcattgaagcaactcatgttctc
ttggtggagcccatattgaaccctgcccatgagcttcaggccataggcagggtgcaccga
attggacagacaaaacctactattgtacacagattcttaattaaagcaacaatagaagaa
agaatgcaggcaatgctgaaaactgctgagaggagtcacacgaactcatcagcaaagcat
tcagaggcctccgtcttgactgtggctgacctggcagacctatttaccaaagaaactgaa
gagcttgaatga
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integrated database retrieval system
