Pongo pygmaeus (Bornean orangutan): 129038017
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Entry
129038017 CDS
T10128
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2 isoform X2
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129038017 (KDM1B)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129038017 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
SWIRM
Thi4
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_binding_3
DAO
Lycopene_cycl
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_9
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
zf-RING_2
KARI_N
Shikimate_DH
Attractin
TrkA_N
Motif
Other DBs
NCBI-GeneID:
129038017
NCBI-ProteinID:
XP_054346481
LinkDB
All DBs
Position
5:18139033..18211373
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AA seq
822 aa
AA seq
DB search
MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRKCEKAGCTA
TCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKPE
TSDHCSLPEDLRVLEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTNRA
AAIGDASPGKLEHSKAALSVHVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEY
SRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKG
LINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAAKQLHNFGIKVTVLEAKDRIGGR
VWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTID
KRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHL
SNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLKSPVQC
IDYSGGEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIE
KIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVAS
VRTLEDKQVLQQCMVTLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYD
IIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccacgggggaggacaaagaaaaaagcatcttttgatcattctccggatagc
cttcctttgaggagctccggtaggcaggcgaagaagaaagcaacagagacaacagatgag
gatgaagatggtgggtcagagaagaagtacaggaaatgtgaaaaggcaggctgtacggca
acatgtcctgtgtgctttgcgagtgcttctgaaagatgtgccaaaaatggctacacctcc
cgatggtatcatctctcctgtggggaacatttctgtaatgaatgctttgaccattactac
agaagccataaggatggatatgacaagtatactacatggaaaaaaatatggactagcaat
ggcaaaactgaacctagtcccaaagctttcatggcagaccagcaactcccctactgggtt
cagtgtacaaaacctgagtgtagaaaatggaggcagcttaccaaggaaatccagcttact
ccacagatagccaagacttatcgatgtggtatgaaaccaaatactgctattaagcctgag
acctcagatcattgttcccttccagaggatctaagagtattggaagtttccaaccattgg
tggtactctatgctcatcctacctcctttgctgaaagacagcgtggcagcgcccctgctg
tctgcctactaccccgactgtgttggcatgagcccctcctgcaccagcacaaaccgtgcc
gctgccattggcgatgccagccctgggaagctggagcactccaaggctgccctctccgtg
cacgttccaggcatgaaccgatacttccagcctttctaccagcccaatgagtgtggcaaa
gccctctgtgtgaggccggatgtgatggaactggatgagctctatgagtttccagagtat
tcccgagaccccaccatgtacctggctttgagaaacctcatcctcgcactgtggtatact
aactgcaaagaagctcttactcctcagaaatgtattcctcacatcatcgtccggggtctc
gtgcgtattcgatgcgttcaggaagtggagagaatactgtattttatgaccagaaaaggt
ctcatcaacactggagttctcagcgtgggagccgaccagtatcttctccctaaggactac
cacaataaatcagtcatcattatcggggctggtcccgcaggattagcagctgctaagcaa
ctgcataactttggaattaaggtgactgtcctggaagccaaagacagaattggaggccga
gtctgggatgataaatcttttaaaggcgtcacagtgggaagaggagctcagattgtcaat
gggtgtattaacaacccagtagcattaatgtgtgagcaacttggcatcagcatgcataaa
tttggagaaagatgtgacttaattcaggaaggtggaagaataactgaccccactattgac
aagcgcatggattttcattttaatgctctcttggatgttgtctctgagtggagaaaggat
aagactcagctccaagatgtccctttaggagaaaagatagaagagatctacaaggcattt
attaaggaatctggtatccaattcagtgagctggagggacaggtgcttcagttccatctc
agtaacctggagtacgcctgtggcagcaaccttcaccaggtatctgctcgctcctgggac
cacaatgaattctttgcccagtttgctggtgaccacactctgctaactcccgggtactca
gtgataattgaaaaactggcagaagggctcgacattcgactcaaatctccagtgcagtgt
attgattattctggaggtgaagtgcaggttaccactacagatggcacagggtattctgca
caaaaggtattagtcactgtaccactggctttactacagaaaggtgccattcagtttaat
ccaccattatcagagaagaagatgaaggctatcaacagcttaggcgcaggcatcattgaa
aagattgccttgcaatttccatatagattttgggacagtaaagttcaaggggctgacttt
tttggtcacgttcctcccagtgccagcaagcgagggctttttgccgtgttctatgatatg
gatccccagaagaagcacagcgtgctgatgtctgtgattgccggggaggctgtcgcgtct
gtgaggaccctggaagacaaacaggtgctgcagcagtgcatggtcacgctccgggagctg
ttcaaggagcaggaggtcccagatcccacaaagtattttgtcactcggtggagcacagac
ccatggatccagatggcatacagttttgtgaagacaggtggaagtggggaggcctatgat
atcattgctgaagacattcaaggaaccgtctttttcgctggtgaggcaacaaacaggcat
ttcccacaaactgttacaggggcatatttgagtggcgttcgagaagcaagcaagattgca
gcattttaa
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