Pongo pygmaeus (Bornean orangutan): 129038033
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Entry
129038033 CDS
T10128
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppyg03016
]
129038033 (CDKAL1)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
129038033 (CDKAL1)
Transfer RNA biogenesis [BR:
ppyg03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
129038033 (CDKAL1)
Prokaryotic type
Methylthiotransferases
129038033 (CDKAL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
129038033
NCBI-ProteinID:
XP_054346510
LinkDB
All DBs
Position
5:20563580..21264623
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AA seq
579 aa
AA seq
DB search
MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQKYLQEEENRPPSDSTI
PGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFR
NSIKKAQEENKKIVVAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLG
QKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVD
RAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEVIPEGAMLRLGMTNPPYILE
HLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKVPGITIAT
DIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKDL
SRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPAFMGKMVEVDIY
ESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLIKDFRNGLGNQLSSGSHTSAASQCDS
ASSRMVLPMPRLHQDCALRMSVGLALLALLFAFFVKVYN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgatacactactggatgacatcgaagatatcgtgtctcaggaa
gattcaaaaccacaagataggcattttgtaagaaaggatgttgtcccgaaggtacgaagg
cgaaatacccaaaaatatttgcaagaggaagaaaacaggccaccaagtgacagcactatt
ccaggcatacagaaaatttggatacgaacatggggttgttctcataataattcagatgga
gaatatatggctggacagctagctgcttatggctataaaattacagaaaatgcatccgat
gcagatttatggctcctgaacagttgcactgtaaaaaacccagctgaagaccactttaga
aactcaattaaaaaagctcaagaggagaacaagaaaattgtagtggctggttgcgttcct
caagcccagcctcgccaggactaccttaagggactgagtatcattggggttcaacagata
gatcgtgttgtagaagttgtggaggaaacaattaaaggtcactctgtgagactgctgggt
cagaaaaaggataatggaaggcggcttgggggagcacgattggatttgccaaagattagg
aagaatccactgatagaaatcatttccatcaataccgggtgtctcaatgcttgtacctac
tgcaaaactaaacacgccagaggaaatttggccagttatccaattgatgaactagtagat
agagccaaacaatcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacg
ggggcttatggcagagatattggcaccaatctccccacactcctgtggaaactggttgaa
gtgattcctgagggagcaatgctgaggcttggcatgacaaatccgccctatattttagag
catctggaggaaatggcgaaaatccttaatcaccccagagtctacgcttttctgcacata
ccagtccagtctgcctccgacagcgtactcatggaaatgaaaagagaatactgtgtggct
gacttcaaaagagtagtggattttctgaaagagaaagttcctggaataactattgctaca
gatattatctgtggttttcctggagaaacagatcaggattttcaagaaacagtgaaactt
gttgaagagtacaaattcccaagcctctttattaaccaattttacccaagaccaggaact
cctgctgcaaaaatggaacaagttccagcacaagtgaaaaagcaaaggacaaaagatctt
tctcgggtatttcattcttacagtccatatgatcacaagattggtgaaagacaacaagtg
ttagtaacagaagaatcttttgattccaagttttatgttgcgcacaatcaattctatgag
caggttttagtgccaaagaaccctgcgttcatggggaaaatggttgaagtggacatctat
gaatcaggcaaacattttatgaaagggcagccggtatctgatgccaaagtgtacacgccc
tccatcagcaaaccgctagcaaagggagaagtctcaggtttgataaaggacttcagaaat
gggcttgggaaccagctgagttcaggatcccacacctctgctgcatctcagtgtgactca
gcaagttccagaatggtgctgcccatgccaaggctacatcaagactgtgcgctgaggatg
tccgtgggcttggctctgctggctcttctttttgctttttttgtcaaggtctataattaa
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