Pongo pygmaeus (Bornean orangutan): 129038924
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Entry
129038924 CDS
T10128
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma
KO
K08526
retinoid X receptor gamma
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03320
PPAR signaling pathway
ppyg04659
Th17 cell differentiation
ppyg04919
Thyroid hormone signaling pathway
ppyg04920
Adipocytokine signaling pathway
ppyg04928
Parathyroid hormone synthesis, secretion and action
ppyg05200
Pathways in cancer
ppyg05202
Transcriptional misregulation in cancer
ppyg05207
Chemical carcinogenesis - receptor activation
ppyg05216
Thyroid cancer
ppyg05222
Small cell lung cancer
ppyg05223
Non-small cell lung cancer
ppyg05226
Gastric cancer
ppyg05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
129038924 (RXRG)
09152 Endocrine system
04920 Adipocytokine signaling pathway
129038924 (RXRG)
03320 PPAR signaling pathway
129038924 (RXRG)
04919 Thyroid hormone signaling pathway
129038924 (RXRG)
04928 Parathyroid hormone synthesis, secretion and action
129038924 (RXRG)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129038924 (RXRG)
05202 Transcriptional misregulation in cancer
129038924 (RXRG)
05207 Chemical carcinogenesis - receptor activation
129038924 (RXRG)
09162 Cancer: specific types
05226 Gastric cancer
129038924 (RXRG)
05216 Thyroid cancer
129038924 (RXRG)
05222 Small cell lung cancer
129038924 (RXRG)
05223 Non-small cell lung cancer
129038924 (RXRG)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
129038924 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129038924 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppyg03310
]
129038924 (RXRG)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
129038924 (RXRG)
Nuclear receptors [BR:
ppyg03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
129038924 (RXRG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
129038924
NCBI-ProteinID:
XP_054348431
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Position
1:84661466..84706121
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AA seq
463 aa
AA seq
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MYGNYSHFMKFPAGYGGSPGHTGSTSMSPSAALSTAKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaattattctcacttcatgaagtttcccgcaggctatggaggctcccctggc
cacactggctctacatccatgagcccatcagcagccttgtccacagcgaagccaatggac
agccaccccagctacacggataccccagtgagtgccccacggactctgagtgcagtgggg
acccccctcaatgccctgggctctccatatcgagtcatcacctctgctatgggcccaccc
tcaggagcactggcagcgcctccaggaatcaacttggttgccccacccagctctcagcta
aatgtggtcaacagtgtcagcagttcagaggacatcaagcccttaccagggcttcccggg
attggaaacatgaactacccatccaccagccctggatctctggttaaacacatctgtgcc
atctgtggagacagatcctcaggaaagcactacggggtatacagttgtgaaggctgcaaa
gggttcttcaagaggacgataaggaaggacctcatctacacgtgtcgggataataaagac
tgcctcattgacaagcgtcagcgcaaccgctgccagtactgtcgctatcagaagtgcctt
gtcatgggcatgaagagggaagctgtgcaagaagaaagacagagaagccgagagcgagcc
gagagtgaggcagaatgtgccagtagtggtcatgaagacatgcctgtggagaggattcta
gaagctgaacttgctgttgaaccaaagacagaatcctatggtgacatgaacatggagaac
tcgacaaatgaccctgttaccaacatatgtcatgctgctgacaagcagcttttcaccctc
gttgaatgggccaagcgtattccccacttctctgacctcaccttggaggaccaggtcatt
ttgcttcgggcagggtggaatgaattgctgattgcctctttctcccaccgctcagtttcc
gtgcaggatggcatccttctggccacgggtttacatgtccacaggagcagtgcccatagt
gctggggtcggctccatctttgacagagttctaactgagctggtttccaaaatgaaagac
atgcagatggacaagtcagagctggggtgcctgcgagccattgtgctctttaacccagat
gccaagggcctgtccaacccctctgaagtggagactctgcgagagaaggtttatgccacc
cttgaggcctacaccaagcagaagtatccagaacagccaggcaggtttgccaagctgctg
ctgcgcctcccagctctgcgctccattggcttgaaatgcctggagcacctcttcttcttc
aagctcatcggggacacccccattgacaccttcctcatggagatgttggagaccccgctg
cagatcacctga
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