Pongo pygmaeus (Bornean orangutan): 129040224
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Entry
129040224 CDS
T10128
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03030
DNA replication
ppyg03410
Base excision repair
ppyg03420
Nucleotide excision repair
ppyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129040224 (RFC2)
03410 Base excision repair
129040224 (RFC2)
03420 Nucleotide excision repair
129040224 (RFC2)
03430 Mismatch repair
129040224 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppyg03032
]
129040224 (RFC2)
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129040224 (RFC2)
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129040224 (RFC2)
DNA replication proteins [BR:
ppyg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129040224 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
129040224 (RFC2)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129040224 (RFC2)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129040224 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
129040224 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
AAA_24
AAA_11
RuvB_N
AAA_assoc_2
DNAX_ATPase_lid
nSTAND3
AAA_19
AAA_5
MipZ
AAA_18
Rad17
AAA_28
ABC_tran
AAA_25
AAA_23
AAA_30
NTPase_1
RNA_helicase
MeaB
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
129040224
NCBI-ProteinID:
XP_054350395
LinkDB
All DBs
Position
6:13779450..13803316
Genome browser
AA seq
357 aa
AA seq
DB search
MESHFVTQAGVQWCDFGSLQPASPWFNQFSCLSLPSSWDYRVEKYRPVKLNEIVGNEDTV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQ
STFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIG
NIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacactttgtcacacaggctggagtgcaatggtgtgatttcggctcactgcaa
cctgcatctccctggttcaatcaattctcctgcctcagccttcctagtagctgggattac
agggttgaaaaatataggccagtaaagctgaatgaaattgtcgggaatgaagacaccgtg
agcaggctagaggtctttgcaagggaaggaaatgtgcccaacatcatcattgcgggccct
ccaggaaccggcaagaccacaagcattctgtgcttggcccgggccctgctgggcccagca
ctcaaagatgccgtgttggaactcaatgcttcaaatgacaggggcattgacgttgtgagg
aataaaattaaaatgtttgctcaacaaaaagtcactcttcccaaaggccgacataagatc
atcattctggatgaagcagacagtatgaccgacggagcccagcaagcgttgaggagaacc
atggaaatctactctaaaaccactcgcttcgcccttgcttgtaacgcttcggataagatc
atcgagcccattcagtcccgctgtgcagtcctccggtacacaaagctgaccgacgcccag
atcctcacgaggctgatgaatgttatcgagaaggagagggtaccctacactgatgacggc
ctggaagccatcatcttcaccgcccagggagacatgaggcaggcgctgaacaacctgcag
tccaccttctcaggatttggcttcattaacagtgagaacgtgttcaaggtctgtgacgag
ccccacccactgctggtaaaggaaatgatccagcactgtgtgaacgccaacatcgacgaa
gcctacaagattcttgctcacttgtggcatctgggctactcaccagaagatatcattggc
aacatctttcgagtgtgtaaaactttccaaatggcagaatacctgaaactggagttcatc
aaggaaattggatacactcacatgaaaatagcggaaggagtgaactcccttttgcagatg
gcaggcctcctggcaaggctgtgtcagaagacaatggccccagtggccagttag
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