Pongo pygmaeus (Bornean orangutan): 129040516
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Entry
129040516 CDS
T10128
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase isoform X1
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129040516 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppyg01007
]
129040516 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppyg03016
]
129040516 (GARS1)
03029 Mitochondrial biogenesis [BR:
ppyg03029
]
129040516 (GARS1)
Enzymes [BR:
ppyg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
129040516 (GARS1)
Amino acid related enzymes [BR:
ppyg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129040516 (GARS1)
Transfer RNA biogenesis [BR:
ppyg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129040516 (GARS1)
Mitochondrial biogenesis [BR:
ppyg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
129040516 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
DUF5915
Motif
Other DBs
NCBI-GeneID:
129040516
NCBI-ProteinID:
XP_054351134
LinkDB
All DBs
Position
6:complement(55942731..55984956)
Genome browser
AA seq
739 aa
AA seq
DB search
MPSLRPVLFRGARAALLLLLPPRLLARPSLLLRRPLSAPSCAPISLPAAASRSSMDGAGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVD
RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEME
SVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKV
GISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL
VAEKPLKEPKTVNVVQFEPNKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEF
TIETEGKTFQLTKDMVNVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYAR
TDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPSIVRDLANGNITWADVE
ARYPLFEGQETGKKETIEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctgcgtccagtgctgtttagaggtgctcgcgcagctctgctgctgctgctg
ccgccccggctattagcccggccctcgctcctgctccgccggcccctcagcgcgccctcc
tgcgccccgatctccttgcccgccgccgcttcccggagcagcatggacggcgcgggggct
gaggaggtgctggcacctctgaggctagcagtgcgccagcagggagatcttgtgcgaaaa
ctcaaagaagataaagcaccccaagtagatgtagacaaagcagtggctgagctcaaagcc
cgcaagagggttctggaagcaaaggagctggcgttacagcccaaagatgatattgtagac
cgagcaaaaatggaagataccctgaagaggaggtttttctatgatcaagcttttgctatt
tatggaggtgttagtggtctgtatgactttgggccagttggctgtgctttgaagaacaat
attattcagacctggaggcagcactttatccaagaggaacagatcctggagatcgattgc
accatgctcacccctgagccagttttaaagacctctggccatgtagacaaatttgctgac
ttcatggtaaaagatgtaaaaaatggagaatgttttcgtgctgaccatctattaaaagct
catttacagaaattgatgtctgataagaagtgttctgttgaaaagaaatcagagatggaa
agtgttttggcccagcttgataactatggacagcaagaacttgcggatctttttgtgaac
tataatgtaaaatctcccattactggaaatgatctatcccctccagtatcttttaactta
atgttcaagactttcattgggcctggaggaaacatgcctgggtacttgagaccagaaact
gcacaggggattttcttgaatttcaaacgacttttggagttcaaccaaggaaagttgcct
tttgctgctgcccagattggaaattcttttagaaatgagatctcccctcgatctggactg
atcagagtcagagaattcacaatggcagaaattgagcactttgtagatcccagtgagaaa
gaccaccccaagttccagaatgtggcagaccttcacctttatttgtattcagccaaagcc
caggtcagcggacagtctgctcggaaaatgcgcctgggagatgctgttgaacagggtgtg
attaataacacagtattaggctatttcattggccgcatctacctctacctcacgaaggtt
ggaatatctccagataaactccgcttccggcagcacatggagaatgagatggcccattac
gcctgtgactgttgggatgcagaatccaaaacgtcctatggttggattgagattgttgga
tgtgctgatcgttcctgttatgacctctcctgtcatgcacgagccaccaaagtcccactt
gtagctgagaaacctctgaaagaacccaaaacagtcaatgttgttcaatttgaacccaat
aagggagcaattggtaaggcgtataagaaggatgcaaaactggtgatggaatatcttgcc
atttgtgatgagtgttacattacagaaatggagatgctgctgaatgagaaaggggaattc
acaattgaaactgaagggaaaacatttcagttaacaaaagacatggtcaatgtgaagaga
ttccagaaaacactatatgtggaagaagttgttccgaatgtaattgaaccctcctttggc
ctgggtaggatcatgtatacggtatttgaacatacattccatgtacgagaaggagatgaa
cagagaacattcttcagtttccctgctgtagtcgctccattcaaatgttccgtcctccca
ctgagccaaaaccaggagttcatgccatttgtcaaggaattatcggaagccctgaccagg
cacggagtgtctcacaaagtagacgattcctctgggtcaatcggaaggcgctatgccagg
actgatgagattggcgtggcttttggtgtcaccattgactttgacacagtgaacaagacc
ccccacactgcaactctgagggaccgtgactcaatgcggcagataagagcagaggtctct
gagctgcccagcatagtccgagacctagccaatggcaacatcacgtgggccgatgtggag
gccaggtatcctctgtttgaagggcaagagactggtaaaaaagagacaatcgaggaatga
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